RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 BUB1B-PAK6H3BSN5 160 aa11.01□□□□□ -0.65
PCDHB3-201ENST00000231130 NHLRC4P0CG21 123 aaPredicted RBP11.01□□□□□ -0.65
PCDHB3-201ENST00000231130 GFRALQ6UXV0 394 aa11.01□□□□□ -0.65
PCDHB3-201ENST00000231130 SRSF1Q07955 248 aaKnown RBP eCLIP11.01□□□□□ -0.65
PCDHB3-201ENST00000231130 RNF182Q8N6D2 247 aa11.01□□□□□ -0.65
PCDHB3-201ENST00000231130 PRR25Q96S07 402 aa11.01□□□□□ -0.65
PCDHB3-201ENST00000231130 BEX4Q9NWD9 120 aaPredicted RBP11.01□□□□□ -0.65
PCDHB3-201ENST00000231130 ATP6V0E2Q8NHE4 81 aa11□□□□□ -0.65
PCDHB3-201ENST00000231130 RNASE6Q93091 150 aaKnown RBP11□□□□□ -0.65
PCDHB3-201ENST00000231130 MYMXA0A1B0GTQ4 84 aa11□□□□□ -0.65
PCDHB3-201ENST00000231130 LYRM7Q5U5X0 104 aa11□□□□□ -0.65
PCDHB3-201ENST00000231130 RAX2Q96IS3 184 aa11□□□□□ -0.65
PCDHB3-201ENST00000231130 CRLF1O75462 422 aa11□□□□□ -0.65
PCDHB3-201ENST00000231130 TAL2Q16559 108 aa11□□□□□ -0.65
PCDHB3-201ENST00000231130 PSMG4Q5JS54 123 aa11□□□□□ -0.65
PCDHB3-201ENST00000231130 ZNF493Q6ZR52 646 aa11□□□□□ -0.65
PCDHB3-201ENST00000231130 LINC00311Q8N616 119 aa11□□□□□ -0.65
PCDHB3-201ENST00000231130 TCL1BO95988 128 aa10.99□□□□□ -0.65
PCDHB3-201ENST00000231130 Q1RN00 199 aa10.99□□□□□ -0.65
PCDHB3-201ENST00000231130 TMEM78Q5T7P6 136 aa10.99□□□□□ -0.65
PCDHB3-201ENST00000231130 RPL7P18124 248 aaKnown RBP10.99□□□□□ -0.65
PCDHB3-201ENST00000231130 Q6ZQT7 251 aa10.99□□□□□ -0.65
PCDHB3-201ENST00000231130 NXT2Q9NPJ8 142 aaKnown RBP10.99□□□□□ -0.65
PCDHB3-201ENST00000231130 DLX6P56179 175 aa10.99□□□□□ -0.65
PCDHB3-201ENST00000231130 PPDPFQ9H3Y8 114 aa10.99□□□□□ -0.65
PCDHB3-201ENST00000231130 HOXB4P17483 251 aaPredicted RBP10.98□□□□□ -0.65
PCDHB3-201ENST00000231130 DEFB123Q8N688 67 aa10.98□□□□□ -0.65
PCDHB3-201ENST00000231130 VCX2Q9H322 139 aa10.98□□□□□ -0.65
PCDHB3-201ENST00000231130 ATRXP46100 2492 aa10.98□□□□□ -0.65
PCDHB3-201ENST00000231130 ATP5J2P56134 94 aa10.98□□□□□ -0.65
PCDHB3-201ENST00000231130 A0A0G2JNJ9 132 aa10.97□□□□□ -0.65
PCDHB3-201ENST00000231130 PRAC2D3DTV9 90 aa10.97□□□□□ -0.65
PCDHB3-201ENST00000231130 TRGV3P03979 118 aa10.97□□□□□ -0.65
PCDHB3-201ENST00000231130 CRYGBP07316 175 aa10.97□□□□□ -0.65
PCDHB3-201ENST00000231130 EMP1P54849 157 aa10.97□□□□□ -0.65
PCDHB3-201ENST00000231130 KLHL30-AS1Q8NEE0 82 aa10.97□□□□□ -0.65
PCDHB3-201ENST00000231130 Q9UFV3 132 aa10.97□□□□□ -0.65
PCDHB3-201ENST00000231130 M0QXV9 152 aa10.97□□□□□ -0.65
PCDHB3-201ENST00000231130 CREBBPQ92793 2442 aa10.97□□□□□ -0.65
PCDHB3-201ENST00000231130 TRBV7-3A0A075B6L6 115 aa10.97□□□□□ -0.65
PCDHB3-201ENST00000231130 RHODO00212 210 aa10.97□□□□□ -0.65
PCDHB3-201ENST00000231130 IGLV1-47P01700 117 aa10.96□□□□□ -0.65
PCDHB3-201ENST00000231130 PVRIGQ6DKI7 326 aa10.96□□□□□ -0.65
PCDHB3-201ENST00000231130 ASCL5Q7RTU5 278 aa10.96□□□□□ -0.65
PCDHB3-201ENST00000231130 OR11H6Q8NGC7 330 aa10.96□□□□□ -0.65
PCDHB3-201ENST00000231130 NTN5Q8WTR8 489 aaPredicted RBP10.96□□□□□ -0.65
PCDHB3-201ENST00000231130 SLC25A16P16260 332 aa10.96□□□□□ -0.66
PCDHB3-201ENST00000231130 MFAP4P55083 255 aa10.96□□□□□ -0.66
PCDHB3-201ENST00000231130 DTX2Q86UW9 622 aa10.96□□□□□ -0.66
PCDHB3-201ENST00000231130 DYNAPQ8N1N2 210 aa10.96□□□□□ -0.66
PCDHB3-201ENST00000231130 C15orf53Q8NAA6 179 aa10.96□□□□□ -0.66
PCDHB3-201ENST00000231130 SLC25A20O43772 301 aa10.96□□□□□ -0.66
PCDHB3-201ENST00000231130 THBDP07204 575 aa10.96□□□□□ -0.66
PCDHB3-201ENST00000231130 IGFL2Q6UWQ7 119 aa10.96□□□□□ -0.66
PCDHB3-201ENST00000231130 IL17RELQ6ZVW7 336 aa10.96□□□□□ -0.66
PCDHB3-201ENST00000231130 IGHV4-39P01824 125 aa10.95□□□□□ -0.66
PCDHB3-201ENST00000231130 NUP37Q8NFH4 326 aa10.95□□□□□ -0.66
PCDHB3-201ENST00000231130 RNF185Q96GF1 192 aa10.95□□□□□ -0.66
PCDHB3-201ENST00000231130 PRADC1Q9BSG0 188 aa10.95□□□□□ -0.66
PCDHB3-201ENST00000231130 C21orf62Q9NYP8 219 aa10.95□□□□□ -0.66
PCDHB3-201ENST00000231130 TNFRSF18Q9Y5U5 241 aa10.95□□□□□ -0.66
PCDHB3-201ENST00000231130 U3KQK5 164 aa10.95□□□□□ -0.66
PCDHB3-201ENST00000231130 TRPT1Q86TN4 253 aaKnown RBP10.95□□□□□ -0.66
PCDHB3-201ENST00000231130 LYPD1Q8N2G4 141 aa10.95□□□□□ -0.66
PCDHB3-201ENST00000231130 SHISA9B4DS77 424 aa10.94□□□□□ -0.66
PCDHB3-201ENST00000231130 E7EQL1 145 aa10.94□□□□□ -0.66
PCDHB3-201ENST00000231130 TNFRSF13BO14836 293 aaPredicted RBP10.94□□□□□ -0.66
PCDHB3-201ENST00000231130 LGALS1P09382 135 aaKnown RBP10.94□□□□□ -0.66
PCDHB3-201ENST00000231130 SCGB3A1Q96QR1 104 aa10.94□□□□□ -0.66
PCDHB3-201ENST00000231130 ZMAT4Q9H898 229 aa10.94□□□□□ -0.66
PCDHB3-201ENST00000231130 MRPS12O15235 138 aaKnown RBP10.94□□□□□ -0.66
PCDHB3-201ENST00000231130 NBR2O15453 112 aa10.94□□□□□ -0.66
PCDHB3-201ENST00000231130 PLEKHB2Q96CS7 222 aa10.94□□□□□ -0.66
PCDHB3-201ENST00000231130 PLA2G2CQ5R387 149 aa10.94□□□□□ -0.66
PCDHB3-201ENST00000231130 CFHR4Q92496 578 aa10.94□□□□□ -0.66
PCDHB3-201ENST00000231130 A0A087WX48 190 aa10.93□□□□□ -0.66
PCDHB3-201ENST00000231130 PLNP26678 52 aa10.93□□□□□ -0.66
PCDHB3-201ENST00000231130 LAGE3Q14657 143 aa10.93□□□□□ -0.66
PCDHB3-201ENST00000231130 MRPL23Q16540 153 aaKnown RBP10.93□□□□□ -0.66
PCDHB3-201ENST00000231130 SPANXN1Q5VSR9 72 aa10.93□□□□□ -0.66
PCDHB3-201ENST00000231130 PIFOQ8TCI5 191 aa10.93□□□□□ -0.66
PCDHB3-201ENST00000231130 PAX8Q06710 450 aa10.93□□□□□ -0.66
PCDHB3-201ENST00000231130 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.93□□□□□ -0.66
PCDHB3-201ENST00000231130 TRAV8-4A0A0B4J246 113 aa10.93□□□□□ -0.66
PCDHB3-201ENST00000231130 ECSCRQ19T08 205 aa10.93□□□□□ -0.66
PCDHB3-201ENST00000231130 CHCHD5Q9BSY4 110 aa10.93□□□□□ -0.66
PCDHB3-201ENST00000231130 H7C1H1 209 aa10.92□□□□□ -0.66
PCDHB3-201ENST00000231130 NDPQ00604 133 aa10.92□□□□□ -0.66
PCDHB3-201ENST00000231130 LINC01560Q8TB33 94 aa10.92□□□□□ -0.66
PCDHB3-201ENST00000231130 CRIP2P52943 208 aaPredicted RBP10.92□□□□□ -0.66
PCDHB3-201ENST00000231130 FANCD2OSQ96PS1 177 aa10.92□□□□□ -0.66
PCDHB3-201ENST00000231130 SORL1Q92673 2214 aa10.91□□□□□ -0.66
PCDHB3-201ENST00000231130 IGKV3-7A0A075B6H7 116 aa10.91□□□□□ -0.66
PCDHB3-201ENST00000231130 GATD1Q8NB37 220 aa10.91□□□□□ -0.66
PCDHB3-201ENST00000231130 VPREB3Q9UKI3 123 aa10.91□□□□□ -0.66
PCDHB3-201ENST00000231130 SMAD5-AS1Q9Y6J3 95 aa10.91□□□□□ -0.66
PCDHB3-201ENST00000231130 COL12A1Q99715 3063 aa10.91□□□□□ -0.66
PCDHB3-201ENST00000231130 F8VRH5 84 aa10.91□□□□□ -0.66
PCDHB3-201ENST00000231130 M0R381 172 aa10.91□□□□□ -0.66
PCDHB3-201ENST00000231130 IGLC6P0CF74 106 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms