RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 A8MWV9 139 aa10.74□□□□□ -0.69
SIX4-201ENST00000216513 THAP8Q8NA92 274 aa10.74□□□□□ -0.69
SIX4-201ENST00000216513 ZNF114Q8NC26 417 aa10.74□□□□□ -0.69
SIX4-201ENST00000216513 PPBPP02775 128 aa10.73□□□□□ -0.69
SIX4-201ENST00000216513 MBD3L1Q8WWY6 194 aa10.73□□□□□ -0.69
SIX4-201ENST00000216513 H3BMM0 161 aa10.73□□□□□ -0.69
SIX4-201ENST00000216513 UBE2WQ96B02 151 aa10.73□□□□□ -0.69
SIX4-201ENST00000216513 ICOSQ9Y6W8 199 aa10.73□□□□□ -0.69
SIX4-201ENST00000216513 PLXNB3Q9ULL4 1909 aa10.73□□□□□ -0.69
SIX4-201ENST00000216513 H3BRN7 92 aa10.73□□□□□ -0.69
SIX4-201ENST00000216513 ZNF726P1Q15940 193 aa10.73□□□□□ -0.69
SIX4-201ENST00000216513 TRPT1Q86TN4 253 aaKnown RBP10.73□□□□□ -0.69
SIX4-201ENST00000216513 ORAOV1Q8WV07 137 aa10.73□□□□□ -0.69
SIX4-201ENST00000216513 DSCAMO60469 2012 aa10.73□□□□□ -0.69
SIX4-201ENST00000216513 VWC2LB2RUY7 222 aa10.72□□□□□ -0.69
SIX4-201ENST00000216513 ZFAND6Q6FIF0 208 aa10.72□□□□□ -0.69
SIX4-201ENST00000216513 C11orf45Q8TAV5 145 aa10.72□□□□□ -0.69
SIX4-201ENST00000216513 TMEM243Q9BU79 118 aa10.72□□□□□ -0.69
SIX4-201ENST00000216513 CDK2AP2O75956 126 aa10.72□□□□□ -0.69
SIX4-201ENST00000216513 LAMTOR3Q9UHA4 124 aa10.72□□□□□ -0.69
SIX4-201ENST00000216513 HIST1H4AP62805 103 aaKnown RBP10.72□□□□□ -0.69
SIX4-201ENST00000216513 TRAV8-4A0A0B4J246 113 aa10.72□□□□□ -0.69
SIX4-201ENST00000216513 ERG28Q9UKR5 140 aa10.72□□□□□ -0.69
SIX4-201ENST00000216513 PCDH15Q96QU1 1955 aa10.72□□□□□ -0.69
SIX4-201ENST00000216513 PFN1P07737 140 aaKnown RBP10.72□□□□□ -0.69
SIX4-201ENST00000216513 ZNF479Q96JC4 524 aa10.72□□□□□ -0.69
SIX4-201ENST00000216513 NCKAP5O14513 1909 aa10.72□□□□□ -0.69
SIX4-201ENST00000216513 TRBV19A0A075B6N1 114 aa10.71□□□□□ -0.69
SIX4-201ENST00000216513 Q6ZSV7 163 aa10.71□□□□□ -0.69
SIX4-201ENST00000216513 Q86TA4 180 aa10.71□□□□□ -0.69
SIX4-201ENST00000216513 IGLC1P0CG04 106 aa10.71□□□□□ -0.69
SIX4-201ENST00000216513 PRRC2AP48634 2157 aaKnown RBP10.71□□□□□ -0.69
SIX4-201ENST00000216513 IGHG2P01859 326 aa10.71□□□□□ -0.69
SIX4-201ENST00000216513 C3orf79P0CE67 100 aa10.71□□□□□ -0.69
SIX4-201ENST00000216513 CCDC168Q8NDH2 2452 aa10.71□□□□□ -0.7
SIX4-201ENST00000216513 NKAPP1Q8N9T2 125 aa10.71□□□□□ -0.7
SIX4-201ENST00000216513 DEFB1P60022 68 aa10.71□□□□□ -0.7
SIX4-201ENST00000216513 UBE2BP63146 152 aa10.71□□□□□ -0.7
SIX4-201ENST00000216513 SAMD5Q5TGI4 173 aa10.71□□□□□ -0.7
SIX4-201ENST00000216513 IGLC7A0M8Q6 106 aa10.7□□□□□ -0.7
SIX4-201ENST00000216513 TMEM190Q8WZ59 177 aa10.7□□□□□ -0.7
SIX4-201ENST00000216513 RASL10AQ92737 203 aa10.7□□□□□ -0.7
SIX4-201ENST00000216513 GYPEP15421 78 aa10.7□□□□□ -0.7
SIX4-201ENST00000216513 PFN2P35080 140 aa10.7□□□□□ -0.7
SIX4-201ENST00000216513 ZNF48Q96MX3 618 aaPredicted RBP10.7□□□□□ -0.7
SIX4-201ENST00000216513 RHOHQ15669 191 aa10.7□□□□□ -0.7
SIX4-201ENST00000216513 K7EMI3 77 aa10.7□□□□□ -0.7
SIX4-201ENST00000216513 MPV17L2Q567V2 206 aa10.7□□□□□ -0.7
SIX4-201ENST00000216513 CHCHD1Q96BP2 118 aaKnown RBP10.7□□□□□ -0.7
SIX4-201ENST00000216513 C16orf74Q96GX8 76 aa10.7□□□□□ -0.7
SIX4-201ENST00000216513 C15orf53Q8NAA6 179 aa10.69□□□□□ -0.7
SIX4-201ENST00000216513 FNDC10F2Z333 226 aa10.69□□□□□ -0.7
SIX4-201ENST00000216513 MAJINQ3KP22 176 aa10.69□□□□□ -0.7
SIX4-201ENST00000216513 ZNF491Q8N8L2 437 aa10.69□□□□□ -0.7
SIX4-201ENST00000216513 C1orf43Q9BWL3 253 aa10.69□□□□□ -0.7
SIX4-201ENST00000216513 C1orf147Q96MC9 270 aaPredicted RBP10.69□□□□□ -0.7
SIX4-201ENST00000216513 NXPH4O95158 308 aa10.69□□□□□ -0.7
SIX4-201ENST00000216513 IGLV3-1P01715 115 aa10.69□□□□□ -0.7
SIX4-201ENST00000216513 MRPL23Q16540 153 aaKnown RBP10.69□□□□□ -0.7
SIX4-201ENST00000216513 ATRXP46100 2492 aa10.68□□□□□ -0.7
SIX4-201ENST00000216513 UBE2CO00762 179 aa10.68□□□□□ -0.7
SIX4-201ENST00000216513 HILS1P60008 231 aa10.68□□□□□ -0.7
SIX4-201ENST00000216513 SPATA25Q9BR10 227 aa10.68□□□□□ -0.7
SIX4-201ENST00000216513 PTPRSQ13332 1948 aa10.68□□□□□ -0.7
SIX4-201ENST00000216513 F8WEM9 126 aa10.68□□□□□ -0.7
SIX4-201ENST00000216513 PLCE1Q9P212 2302 aa10.68□□□□□ -0.7
SIX4-201ENST00000216513 ARHGAP21Q5T5U3 1957 aa10.68□□□□□ -0.7
SIX4-201ENST00000216513 TRAV8-3A0A0A6YYJ7 113 aa10.68□□□□□ -0.7
SIX4-201ENST00000216513 PYY3Q5JQD4 70 aa10.68□□□□□ -0.7
SIX4-201ENST00000216513 TRBV12-3P01733 135 aa10.68□□□□□ -0.7
SIX4-201ENST00000216513 PROP1O75360 226 aa10.67□□□□□ -0.7
SIX4-201ENST00000216513 C11orf71Q6IPW1 123 aa10.67□□□□□ -0.7
SIX4-201ENST00000216513 TMEM242Q9NWH2 141 aa10.67□□□□□ -0.7
SIX4-201ENST00000216513 ANKHD1Q8IWZ3 2542 aaKnown RBP10.67□□□□□ -0.7
SIX4-201ENST00000216513 MRPL53Q96EL3 112 aaKnown RBP10.67□□□□□ -0.7
SIX4-201ENST00000216513 NDUFAF3Q9BU61 184 aa10.67□□□□□ -0.7
SIX4-201ENST00000216513 LINC00482Q8N8I6 264 aa10.67□□□□□ -0.7
SIX4-201ENST00000216513 NACAE9PAV3 2078 aa10.67□□□□□ -0.7
SIX4-201ENST00000216513 ATXN8Q156A1 80 aa10.67□□□□□ -0.7
SIX4-201ENST00000216513 SEC11AP67812 179 aa10.66□□□□□ -0.7
SIX4-201ENST00000216513 LY6G6CO95867 125 aa10.66□□□□□ -0.7
SIX4-201ENST00000216513 PYGO2Q9BRQ0 406 aa10.66□□□□□ -0.7
SIX4-201ENST00000216513 KIAA1549LQ6ZVL6 1849 aa10.66□□□□□ -0.7
SIX4-201ENST00000216513 GNRH2O43555 120 aa10.66□□□□□ -0.7
SIX4-201ENST00000216513 KRTAP27-1Q3LI81 207 aa10.66□□□□□ -0.7
SIX4-201ENST00000216513 OCIAD2Q56VL3 154 aa10.66□□□□□ -0.7
SIX4-201ENST00000216513 TMEM61Q8N0U2 210 aa10.66□□□□□ -0.7
SIX4-201ENST00000216513 ANAPC13Q9BS18 74 aa10.66□□□□□ -0.7
SIX4-201ENST00000216513 TP53TG1Q9Y2A0 90 aa10.66□□□□□ -0.7
SIX4-201ENST00000216513 PRIMA1Q86XR5 153 aa10.65□□□□□ -0.7
SIX4-201ENST00000216513 PIEZO2Q9H5I5 2752 aa10.65□□□□□ -0.7
SIX4-201ENST00000216513 TMEM238C9JI98 176 aa10.65□□□□□ -0.7
SIX4-201ENST00000216513 TNFRSF6BO95407 300 aa10.65□□□□□ -0.7
SIX4-201ENST00000216513 ZC2HC1BQ5TFG8 222 aa10.65□□□□□ -0.71
SIX4-201ENST00000216513 SHANK1Q9Y566 2161 aa10.65□□□□□ -0.71
SIX4-201ENST00000216513 RASL11AQ6T310 242 aa10.65□□□□□ -0.71
SIX4-201ENST00000216513 TRAV25A0A0B4J276 109 aa10.64□□□□□ -0.71
SIX4-201ENST00000216513 PRSS29PA6NIE9 313 aa10.64□□□□□ -0.71
SIX4-201ENST00000216513 LINC01548A6NM66 108 aa10.64□□□□□ -0.71
SIX4-201ENST00000216513 RS1O15537 224 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms