RNA–Protein interactions for RNA: ENST00000215794.7

USP18-201, Transcript of ubiquitin specific peptidase 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP18, Length 2,129 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP18-201ENST00000215794 CHCHD1Q96BP2 118 aaKnown RBP13.76□□□□□ -0.21
USP18-201ENST00000215794 C2orf70A6NJV1 201 aa13.76□□□□□ -0.21
USP18-201ENST00000215794 SPATA45Q537H7 98 aa13.76□□□□□ -0.21
USP18-201ENST00000215794 LINC00173Q6ZV60 143 aa13.76□□□□□ -0.21
USP18-201ENST00000215794 ZNF738Q8NE65 137 aa13.76□□□□□ -0.21
USP18-201ENST00000215794 VPREB3Q9UKI3 123 aa13.76□□□□□ -0.21
USP18-201ENST00000215794 SOCS3O14543 225 aa13.75□□□□□ -0.21
USP18-201ENST00000215794 PSMB8P28062 276 aa13.75□□□□□ -0.21
USP18-201ENST00000215794 TWIST1Q15672 202 aa13.75□□□□□ -0.21
USP18-201ENST00000215794 C9orf47Q6ZRZ4 202 aa13.75□□□□□ -0.21
USP18-201ENST00000215794 SPATA12Q7Z6I5 190 aa13.75□□□□□ -0.21
USP18-201ENST00000215794 ATOH7Q8N100 152 aa13.75□□□□□ -0.21
USP18-201ENST00000215794 TMEM160Q9NX00 188 aa13.75□□□□□ -0.21
USP18-201ENST00000215794 MSRB1Q9NZV6 116 aa13.75□□□□□ -0.21
USP18-201ENST00000215794 IGKV3D-20A0A0C4DH25 116 aa13.75□□□□□ -0.21
USP18-201ENST00000215794 DNAJC9-AS1A6NH13 148 aa13.75□□□□□ -0.21
USP18-201ENST00000215794 D6R8Y8 96 aa13.75□□□□□ -0.21
USP18-201ENST00000215794 RPL11P62913 178 aaKnown RBP13.75□□□□□ -0.21
USP18-201ENST00000215794 FOXE3Q13461 319 aa13.75□□□□□ -0.21
USP18-201ENST00000215794 LINC01559Q495D7 138 aa13.75□□□□□ -0.21
USP18-201ENST00000215794 FAM104BQ5XKR9 115 aa13.75□□□□□ -0.21
USP18-201ENST00000215794 TEX29Q8N6K0 151 aa13.75□□□□□ -0.21
USP18-201ENST00000215794 HNRNPA3P51991 378 aaKnown RBP13.74□□□□□ -0.21
USP18-201ENST00000215794 PRR9Q5T870 116 aa13.74□□□□□ -0.21
USP18-201ENST00000215794 RHPN1-AS1Q9BWJ2 59 aa13.74□□□□□ -0.21
USP18-201ENST00000215794 PEF1Q9UBV8 284 aaKnown RBP13.74□□□□□ -0.21
USP18-201ENST00000215794 MRPS16Q9Y3D3 137 aaKnown RBP13.74□□□□□ -0.21
USP18-201ENST00000215794 IGHV7-4-1A0A0J9YVY3 117 aa13.73□□□□□ -0.21
USP18-201ENST00000215794 TCF21O43680 179 aa13.73□□□□□ -0.21
USP18-201ENST00000215794 LAMTOR2Q9Y2Q5 125 aa13.73□□□□□ -0.21
USP18-201ENST00000215794 IGLC3P0DOY3 106 aa13.73□□□□□ -0.21
USP18-201ENST00000215794 MRPL51Q4U2R6 128 aaKnown RBP13.73□□□□□ -0.21
USP18-201ENST00000215794 SMKR1H3BMG3 65 aa13.72□□□□□ -0.21
USP18-201ENST00000215794 J3KRW8 73 aa13.72□□□□□ -0.21
USP18-201ENST00000215794 ZNF580Q9UK33 172 aa13.72□□□□□ -0.21
USP18-201ENST00000215794 Q6ZN92 141 aa13.72□□□□□ -0.21
USP18-201ENST00000215794 DAZ1Q9NQZ3 744 aaKnown RBP13.72□□□□□ -0.21
USP18-201ENST00000215794 F6UB75 175 aa13.71□□□□□ -0.21
USP18-201ENST00000215794 PTTG1IPP53801 180 aa13.71□□□□□ -0.21
USP18-201ENST00000215794 FAM106AQ4KMX7 169 aa13.71□□□□□ -0.21
USP18-201ENST00000215794 TIMM8BQ9Y5J9 83 aaPredicted RBP13.71□□□□□ -0.21
USP18-201ENST00000215794 LOC389332A0A1B0GUA5 103 aa13.7□□□□□ -0.22
USP18-201ENST00000215794 HIST1H1AQ02539 215 aaPredicted RBP13.7□□□□□ -0.22
USP18-201ENST00000215794 PRELID3AQ96N28 172 aa13.7□□□□□ -0.22
USP18-201ENST00000215794 U3KQK5 164 aa13.7□□□□□ -0.22
USP18-201ENST00000215794 LEPROTL1O95214 131 aa13.7□□□□□ -0.22
USP18-201ENST00000215794 NCR2O95944 276 aa13.7□□□□□ -0.22
USP18-201ENST00000215794 IFI27P40305 119 aaPredicted RBP13.7□□□□□ -0.22
USP18-201ENST00000215794 CNFNQ9BYD5 112 aa13.7□□□□□ -0.22
USP18-201ENST00000215794 TMEM70Q9BUB7 260 aa13.69□□□□□ -0.22
USP18-201ENST00000215794 SMPXQ9UHP9 88 aa13.69□□□□□ -0.22
USP18-201ENST00000215794 TFPI2P48307 235 aa13.69□□□□□ -0.22
USP18-201ENST00000215794 ORMDL3Q8N138 153 aa13.69□□□□□ -0.22
USP18-201ENST00000215794 PRSS3P2Q8NHM4 247 aa13.69□□□□□ -0.22
USP18-201ENST00000215794 ZNF702PQ9H963 129 aa13.69□□□□□ -0.22
USP18-201ENST00000215794 K7EP13 123 aa13.68□□□□□ -0.22
USP18-201ENST00000215794 GAS8-AS1O95177 125 aa13.68□□□□□ -0.22
USP18-201ENST00000215794 UBE2V1Q13404 147 aa13.68□□□□□ -0.22
USP18-201ENST00000215794 RNF185Q96GF1 192 aa13.68□□□□□ -0.22
USP18-201ENST00000215794 TMEM191AQ9H0A3 160 aa13.68□□□□□ -0.22
USP18-201ENST00000215794 AP5S1Q9NUS5 200 aa13.68□□□□□ -0.22
USP18-201ENST00000215794 SIGLEC8Q9NYZ4 499 aa13.68□□□□□ -0.22
USP18-201ENST00000215794 SETD2Q9BYW2 2564 aaPredicted RBP13.68□□□□□ -0.22
USP18-201ENST00000215794 FA2HQ7L5A8 372 aa13.67□□□□□ -0.22
USP18-201ENST00000215794 STPG4Q8N801 248 aa13.67□□□□□ -0.22
USP18-201ENST00000215794 OR10J6PQ8NGY7 276 aa13.67□□□□□ -0.22
USP18-201ENST00000215794 CRLF1O75462 422 aa13.67□□□□□ -0.22
USP18-201ENST00000215794 NPYP01303 97 aa13.67□□□□□ -0.22
USP18-201ENST00000215794 ZFAND2AQ8N6M9 145 aa13.67□□□□□ -0.22
USP18-201ENST00000215794 OR10AG1Q8NH19 301 aa13.67□□□□□ -0.22
USP18-201ENST00000215794 JMJD1CQ15652 2540 aa13.67□□□□□ -0.22
USP18-201ENST00000215794 SYS1-DBNDD2H3BUS1 97 aa13.66□□□□□ -0.22
USP18-201ENST00000215794 OVOL1O14753 267 aa13.66□□□□□ -0.22
USP18-201ENST00000215794 CKS2P33552 79 aa13.66□□□□□ -0.22
USP18-201ENST00000215794 KIR3DS1Q14943 382 aa13.66□□□□□ -0.22
USP18-201ENST00000215794 ZNF418Q8TF45 676 aaPredicted RBP13.66□□□□□ -0.22
USP18-201ENST00000215794 MCRIP2Q9BUT9 160 aaKnown RBP13.66□□□□□ -0.22
USP18-201ENST00000215794 LINC00477Q96M19 166 aa13.66□□□□□ -0.22
USP18-201ENST00000215794 COX11Q9Y6N1 276 aa13.66□□□□□ -0.22
USP18-201ENST00000215794 H0Y8G0 127 aa13.65□□□□□ -0.22
USP18-201ENST00000215794 K7EMT4 169 aa13.65□□□□□ -0.22
USP18-201ENST00000215794 FXYD7P58549 80 aa13.65□□□□□ -0.22
USP18-201ENST00000215794 HIST2H2BDQ6DRA6 164 aa13.65□□□□□ -0.22
USP18-201ENST00000215794 WFDC3Q8IUB2 231 aa13.65□□□□□ -0.22
USP18-201ENST00000215794 A0A096LNJ9 63 aa13.64□□□□□ -0.23
USP18-201ENST00000215794 CRXO43186 299 aaPredicted RBP13.64□□□□□ -0.23
USP18-201ENST00000215794 OR5AL1P0C617 328 aa13.64□□□□□ -0.23
USP18-201ENST00000215794 TSPOP30536 169 aa13.64□□□□□ -0.23
USP18-201ENST00000215794 CDKN1BP46527 198 aa13.64□□□□□ -0.23
USP18-201ENST00000215794 HILS1P60008 231 aa13.64□□□□□ -0.23
USP18-201ENST00000215794 OR8A1Q8NGG7 326 aa13.64□□□□□ -0.23
USP18-201ENST00000215794 LENEPQ9Y5L5 61 aa13.64□□□□□ -0.23
USP18-201ENST00000215794 TRAV9-2A0A087WT02 112 aa13.64□□□□□ -0.23
USP18-201ENST00000215794 SCGB2A2Q13296 93 aa13.64□□□□□ -0.23
USP18-201ENST00000215794 TMEM89A2RUT3 159 aa13.63□□□□□ -0.23
USP18-201ENST00000215794 H3BVH4 76 aa13.63□□□□□ -0.23
USP18-201ENST00000215794 SPRY2O43597 315 aa13.63□□□□□ -0.23
USP18-201ENST00000215794 TMEM86BQ8N661 226 aa13.63□□□□□ -0.23
USP18-201ENST00000215794 DCANP1Q8TF63 244 aa13.63□□□□□ -0.23
USP18-201ENST00000215794 OR4C46A6NHA9 309 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms