RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 SNAI2O43623 268 aa13.88□□□□□ -0.19
CTSA-201ENST00000191018 NDUFA7O95182 113 aa13.88□□□□□ -0.19
CTSA-201ENST00000191018 AMTP48728 403 aa13.88□□□□□ -0.19
CTSA-201ENST00000191018 DMRTA1Q5VZB9 504 aa13.88□□□□□ -0.19
CTSA-201ENST00000191018 AMN1Q8IY45 258 aa13.88□□□□□ -0.19
CTSA-201ENST00000191018 MSRB1Q9NZV6 116 aa13.88□□□□□ -0.19
CTSA-201ENST00000191018 HIVEP2P31629 2446 aa13.87□□□□□ -0.19
CTSA-201ENST00000191018 RNASE4P34096 147 aaKnown RBP13.87□□□□□ -0.19
CTSA-201ENST00000191018 NIT1Q86X76 327 aa13.87□□□□□ -0.19
CTSA-201ENST00000191018 U3KQK5 164 aa13.87□□□□□ -0.19
CTSA-201ENST00000191018 CD33P20138 364 aa13.87□□□□□ -0.19
CTSA-201ENST00000191018 C11orf44Q8N8P7 122 aa13.87□□□□□ -0.19
CTSA-201ENST00000191018 JMJD8Q96S16 334 aa13.87□□□□□ -0.19
CTSA-201ENST00000191018 IGHV4-4A0A075B6R2 117 aa13.86□□□□□ -0.19
CTSA-201ENST00000191018 PMCHP20382 165 aa13.86□□□□□ -0.19
CTSA-201ENST00000191018 CITED2Q99967 270 aaPredicted RBP13.86□□□□□ -0.19
CTSA-201ENST00000191018 TSSC4Q9Y5U2 329 aaPredicted RBP13.86□□□□□ -0.19
CTSA-201ENST00000191018 MRPL51Q4U2R6 128 aaKnown RBP13.85□□□□□ -0.19
CTSA-201ENST00000191018 EBLN2Q6P2I7 272 aa13.85□□□□□ -0.19
CTSA-201ENST00000191018 TMEM61Q8N0U2 210 aa13.85□□□□□ -0.19
CTSA-201ENST00000191018 OR10AG1Q8NH19 301 aa13.85□□□□□ -0.19
CTSA-201ENST00000191018 CHCHD1Q96BP2 118 aaKnown RBP13.85□□□□□ -0.19
CTSA-201ENST00000191018 GSN-AS1Q9NRJ2 163 aa13.85□□□□□ -0.19
CTSA-201ENST00000191018 HSBP1O75506 76 aa13.84□□□□□ -0.19
CTSA-201ENST00000191018 S100A12P80511 92 aa13.84□□□□□ -0.19
CTSA-201ENST00000191018 ANXA2RQ3ZCQ2 193 aa13.84□□□□□ -0.19
CTSA-201ENST00000191018 RNASEKQ6P5S7 137 aaKnown RBP13.84□□□□□ -0.19
CTSA-201ENST00000191018 FOXI2Q6ZQN5 318 aa13.84□□□□□ -0.19
CTSA-201ENST00000191018 FAM19A2Q8N3H0 131 aa13.84□□□□□ -0.19
CTSA-201ENST00000191018 NAGKQ9UJ70 344 aa13.84□□□□□ -0.19
CTSA-201ENST00000191018 CCL24O00175 119 aa13.84□□□□□ -0.19
CTSA-201ENST00000191018 DEFB114Q30KQ6 69 aa13.84□□□□□ -0.19
CTSA-201ENST00000191018 RNF185Q96GF1 192 aa13.84□□□□□ -0.19
CTSA-201ENST00000191018 A0A1W2PRX2 142 aa13.83□□□□□ -0.2
CTSA-201ENST00000191018 D6R8Y8 96 aa13.83□□□□□ -0.2
CTSA-201ENST00000191018 DUSP14O95147 198 aaKnown RBP13.83□□□□□ -0.2
CTSA-201ENST00000191018 LEPP41159 167 aa13.83□□□□□ -0.2
CTSA-201ENST00000191018 PROK1P58294 105 aa13.83□□□□□ -0.2
CTSA-201ENST00000191018 CACNG7P62955 275 aa13.83□□□□□ -0.2
CTSA-201ENST00000191018 RNF114Q9Y508 228 aa13.83□□□□□ -0.2
CTSA-201ENST00000191018 H3BVH4 76 aa13.82□□□□□ -0.2
CTSA-201ENST00000191018 LINC00614P0C842 121 aa13.82□□□□□ -0.2
CTSA-201ENST00000191018 MED14OSP0DP75 135 aa13.82□□□□□ -0.2
CTSA-201ENST00000191018 ORMDL3Q8N138 153 aa13.82□□□□□ -0.2
CTSA-201ENST00000191018 DYNLRB2Q8TF09 96 aa13.82□□□□□ -0.2
CTSA-201ENST00000191018 RAB4AP20338 218 aa13.82□□□□□ -0.2
CTSA-201ENST00000191018 AGRNO00468 2067 aa13.81□□□□□ -0.2
CTSA-201ENST00000191018 NOTCH2Q04721 2471 aa13.81□□□□□ -0.2
CTSA-201ENST00000191018 ASIPP42127 132 aa13.81□□□□□ -0.2
CTSA-201ENST00000191018 PRELID3AQ96N28 172 aa13.81□□□□□ -0.2
CTSA-201ENST00000191018 SCRT2Q9NQ03 307 aa13.81□□□□□ -0.2
CTSA-201ENST00000191018 C7orf71A4D174 169 aa13.8□□□□□ -0.2
CTSA-201ENST00000191018 A8MTW9 85 aa13.8□□□□□ -0.2
CTSA-201ENST00000191018 AMTNQ6UX39 209 aa13.8□□□□□ -0.2
CTSA-201ENST00000191018 SIGLEC8Q9NYZ4 499 aa13.8□□□□□ -0.2
CTSA-201ENST00000191018 INAFM1C9JVW0 142 aa13.8□□□□□ -0.2
CTSA-201ENST00000191018 SCGB1D1O95968 90 aa13.8□□□□□ -0.2
CTSA-201ENST00000191018 CDKN1BP46527 198 aa13.8□□□□□ -0.2
CTSA-201ENST00000191018 CD300EQ496F6 205 aaPredicted RBP13.8□□□□□ -0.2
CTSA-201ENST00000191018 SPANXN1Q5VSR9 72 aa13.8□□□□□ -0.2
CTSA-201ENST00000191018 M0R2Z0 102 aa13.79□□□□□ -0.2
CTSA-201ENST00000191018 GNRH2O43555 120 aa13.79□□□□□ -0.2
CTSA-201ENST00000191018 PPBPP02775 128 aa13.79□□□□□ -0.2
CTSA-201ENST00000191018 RNASE3P12724 160 aaKnown RBP13.79□□□□□ -0.2
CTSA-201ENST00000191018 FOSL1P15407 271 aa13.79□□□□□ -0.2
CTSA-201ENST00000191018 CKS2P33552 79 aa13.79□□□□□ -0.2
CTSA-201ENST00000191018 DEFB131AP59861 70 aa13.79□□□□□ -0.2
CTSA-201ENST00000191018 SORL1Q92673 2214 aa13.79□□□□□ -0.2
CTSA-201ENST00000191018 TRAV12-3A0A0B4J271 114 aa13.78□□□□□ -0.2
CTSA-201ENST00000191018 ADARB2-AS1A8MUL3 147 aa13.78□□□□□ -0.2
CTSA-201ENST00000191018 IGKV3-20P01619 116 aa13.78□□□□□ -0.2
CTSA-201ENST00000191018 EVI2AP22794 236 aa13.78□□□□□ -0.2
CTSA-201ENST00000191018 S100A4P26447 101 aaKnown RBP13.78□□□□□ -0.2
CTSA-201ENST00000191018 TSPOP30536 169 aa13.78□□□□□ -0.2
CTSA-201ENST00000191018 TDRG1Q3Y452 100 aa13.78□□□□□ -0.2
CTSA-201ENST00000191018 SPAG8Q99932 426 aaPredicted RBP13.78□□□□□ -0.2
CTSA-201ENST00000191018 TRAV25A0A0B4J276 109 aa13.78□□□□□ -0.2
CTSA-201ENST00000191018 IGHV1-24A0A0C4DH33 117 aa13.78□□□□□ -0.2
CTSA-201ENST00000191018 HLA-DRB4P13762 266 aa13.78□□□□□ -0.2
CTSA-201ENST00000191018 FAM159AQ6UWV7 190 aa13.78□□□□□ -0.2
CTSA-201ENST00000191018 ZNF256Q9Y2P7 627 aaPredicted RBP13.78□□□□□ -0.2
CTSA-201ENST00000191018 HLA-DRB4X5D2U9 266 aa13.78□□□□□ -0.2
CTSA-201ENST00000191018 SMKR1H3BMG3 65 aa13.77□□□□□ -0.21
CTSA-201ENST00000191018 Q8N976 141 aa13.77□□□□□ -0.21
CTSA-201ENST00000191018 MAP6D1Q9H9H5 199 aa13.77□□□□□ -0.21
CTSA-201ENST00000191018 TRAV12-2A0A075B6T6 113 aa13.76□□□□□ -0.21
CTSA-201ENST00000191018 NPYP01303 97 aa13.76□□□□□ -0.21
CTSA-201ENST00000191018 C3orf79P0CE67 100 aa13.76□□□□□ -0.21
CTSA-201ENST00000191018 KRTDAPP60985 99 aa13.76□□□□□ -0.21
CTSA-201ENST00000191018 SPINK13Q1W4C9 94 aa13.76□□□□□ -0.21
CTSA-201ENST00000191018 SMIM15Q7Z3B0 74 aa13.76□□□□□ -0.21
CTSA-201ENST00000191018 LAMTOR2Q9Y2Q5 125 aa13.76□□□□□ -0.21
CTSA-201ENST00000191018 OR4C46A6NHA9 309 aa13.76□□□□□ -0.21
CTSA-201ENST00000191018 KNCNA6PVL3 124 aa13.76□□□□□ -0.21
CTSA-201ENST00000191018 H3BMM0 161 aa13.76□□□□□ -0.21
CTSA-201ENST00000191018 NCR2O95944 276 aa13.76□□□□□ -0.21
CTSA-201ENST00000191018 PMCHL1Q16048 86 aa13.76□□□□□ -0.21
CTSA-201ENST00000191018 PRSS3P2Q8NHM4 247 aa13.76□□□□□ -0.21
CTSA-201ENST00000191018 AP5S1Q9NUS5 200 aa13.76□□□□□ -0.21
CTSA-201ENST00000191018 PHLDA3Q9Y5J5 127 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms