RNA–Protein interactions for RNA: ENST00000164640.8

PDZD4-201, Transcript of PDZ domain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDZD4, Length 3,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-201ENST00000164640 PRSS2P07478 247 aa11.68□□□□□ -0.54
PDZD4-201ENST00000164640 SMCPP49901 116 aaPredicted RBP11.68□□□□□ -0.54
PDZD4-201ENST00000164640 TRAV2A0A0B4J234 112 aa11.68□□□□□ -0.54
PDZD4-201ENST00000164640 KALRNO60229 2985 aa11.68□□□□□ -0.54
PDZD4-201ENST00000164640 ORMDL2Q53FV1 153 aa11.68□□□□□ -0.54
PDZD4-201ENST00000164640 DMXL2Q8TDJ6 3036 aa11.68□□□□□ -0.54
PDZD4-201ENST00000164640 FCN3O75636 299 aa11.67□□□□□ -0.54
PDZD4-201ENST00000164640 RPL39LQ96EH5 51 aaKnown RBP11.67□□□□□ -0.54
PDZD4-201ENST00000164640 Q6ZQT7 251 aa11.67□□□□□ -0.54
PDZD4-201ENST00000164640 SMIM2Q9BVW6 85 aa11.67□□□□□ -0.54
PDZD4-201ENST00000164640 PIFOQ8TCI5 191 aa11.67□□□□□ -0.54
PDZD4-201ENST00000164640 RIF1Q5UIP0 2472 aaKnown RBP11.67□□□□□ -0.54
PDZD4-201ENST00000164640 SLC25A20O43772 301 aa11.66□□□□□ -0.54
PDZD4-201ENST00000164640 LGALS3P17931 250 aaKnown RBP11.66□□□□□ -0.54
PDZD4-201ENST00000164640 C16orf92Q96LL3 132 aa11.66□□□□□ -0.54
PDZD4-201ENST00000164640 HERV-K104P63124 156 aa11.66□□□□□ -0.54
PDZD4-201ENST00000164640 FHL3Q13643 280 aa11.66□□□□□ -0.54
PDZD4-201ENST00000164640 SUMO2P61956 95 aaKnown RBP11.66□□□□□ -0.54
PDZD4-201ENST00000164640 NDPQ00604 133 aa11.66□□□□□ -0.54
PDZD4-201ENST00000164640 TRPT1Q86TN4 253 aaKnown RBP11.66□□□□□ -0.54
PDZD4-201ENST00000164640 IGKV3D-20A0A0C4DH25 116 aa11.65□□□□□ -0.54
PDZD4-201ENST00000164640 NTN5Q8WTR8 489 aaPredicted RBP11.65□□□□□ -0.54
PDZD4-201ENST00000164640 RNASE6Q93091 150 aaKnown RBP11.65□□□□□ -0.54
PDZD4-201ENST00000164640 CREBBPQ92793 2442 aa11.65□□□□□ -0.54
PDZD4-201ENST00000164640 MBD3L4A6NDZ8 208 aaPredicted RBP11.65□□□□□ -0.54
PDZD4-201ENST00000164640 MBD3L3A6NE82 208 aaPredicted RBP11.65□□□□□ -0.54
PDZD4-201ENST00000164640 MBD3L5A6NJ08 208 aaPredicted RBP11.65□□□□□ -0.54
PDZD4-201ENST00000164640 MBD3L2Q8NHZ7 208 aaPredicted RBP11.65□□□□□ -0.54
PDZD4-201ENST00000164640 AGPAT4-IT1Q9H0P7 198 aa11.65□□□□□ -0.54
PDZD4-201ENST00000164640 VCX2Q9H322 139 aa11.65□□□□□ -0.54
PDZD4-201ENST00000164640 GAGE12JA6NER3 117 aa11.64□□□□□ -0.55
PDZD4-201ENST00000164640 GAGE7O76087 117 aa11.64□□□□□ -0.55
PDZD4-201ENST00000164640 GAGE12FP0CL80 117 aa11.64□□□□□ -0.55
PDZD4-201ENST00000164640 GAGE12GP0CL81 117 aa11.64□□□□□ -0.55
PDZD4-201ENST00000164640 GAGE12IP0CL82 117 aa11.64□□□□□ -0.55
PDZD4-201ENST00000164640 GAGE4Q13068 117 aa11.64□□□□□ -0.55
PDZD4-201ENST00000164640 CARD19Q96LW7 228 aa11.64□□□□□ -0.55
PDZD4-201ENST00000164640 CLEC19AQ6UXS0 136 aa11.64□□□□□ -0.55
PDZD4-201ENST00000164640 DPM3Q9P2X0 92 aa11.64□□□□□ -0.55
PDZD4-201ENST00000164640 FAM215AQ9Y5M1 114 aa11.64□□□□□ -0.55
PDZD4-201ENST00000164640 LY6HO94772 140 aa11.63□□□□□ -0.55
PDZD4-201ENST00000164640 FAM74A4Q5TZK3 123 aa11.63□□□□□ -0.55
PDZD4-201ENST00000164640 ATP6V0E2Q8NHE4 81 aa11.63□□□□□ -0.55
PDZD4-201ENST00000164640 ADGRG4Q8IZF6 3080 aa11.63□□□□□ -0.55
PDZD4-201ENST00000164640 COL6A6A6NMZ7 2263 aa11.63□□□□□ -0.55
PDZD4-201ENST00000164640 MRPS12O15235 138 aaKnown RBP11.63□□□□□ -0.55
PDZD4-201ENST00000164640 C11orf21Q9P2W6 132 aa11.63□□□□□ -0.55
PDZD4-201ENST00000164640 NDUFA11Q86Y39 141 aa11.62□□□□□ -0.55
PDZD4-201ENST00000164640 PRO1854Q9UHT4 67 aa11.62□□□□□ -0.55
PDZD4-201ENST00000164640 MUC3AQ02505 3323 aa11.62□□□□□ -0.55
PDZD4-201ENST00000164640 CRYGBP07316 175 aa11.62□□□□□ -0.55
PDZD4-201ENST00000164640 SPTAN1Q13813 2472 aaKnown RBP11.62□□□□□ -0.55
PDZD4-201ENST00000164640 TRAV8-4A0A0B4J246 113 aa11.62□□□□□ -0.55
PDZD4-201ENST00000164640 IFITM1P13164 125 aa11.62□□□□□ -0.55
PDZD4-201ENST00000164640 TCF15Q12870 199 aa11.62□□□□□ -0.55
PDZD4-201ENST00000164640 C15orf32Q32M92 178 aa11.62□□□□□ -0.55
PDZD4-201ENST00000164640 BAALCQ8WXS3 180 aa11.62□□□□□ -0.55
PDZD4-201ENST00000164640 COLQQ9Y215 455 aaPredicted RBP11.62□□□□□ -0.55
PDZD4-201ENST00000164640 ZNF256Q9Y2P7 627 aaPredicted RBP11.62□□□□□ -0.55
PDZD4-201ENST00000164640 SMG1Q96Q15 3661 aaKnown RBP11.61□□□□□ -0.55
PDZD4-201ENST00000164640 DUSP14O95147 198 aaKnown RBP11.61□□□□□ -0.55
PDZD4-201ENST00000164640 CD59P13987 128 aa11.61□□□□□ -0.55
PDZD4-201ENST00000164640 NPC2P61916 151 aa11.61□□□□□ -0.55
PDZD4-201ENST00000164640 TRAV4A0A0B4J268 109 aa11.61□□□□□ -0.55
PDZD4-201ENST00000164640 CCDC179H3BU77 68 aa11.61□□□□□ -0.55
PDZD4-201ENST00000164640 TP53TG1Q9Y2A0 90 aa11.61□□□□□ -0.55
PDZD4-201ENST00000164640 SMAD5-AS1Q9Y6J3 95 aa11.61□□□□□ -0.55
PDZD4-201ENST00000164640 IGLV1-47P01700 117 aa11.61□□□□□ -0.55
PDZD4-201ENST00000164640 C5orf64Q2M2E5 130 aa11.61□□□□□ -0.55
PDZD4-201ENST00000164640 TIMD4Q96H15 378 aa11.61□□□□□ -0.55
PDZD4-201ENST00000164640 NRACQ8N912 160 aa11.6□□□□□ -0.55
PDZD4-201ENST00000164640 DEFB1P60022 68 aa11.6□□□□□ -0.55
PDZD4-201ENST00000164640 MGAQ8IWI9 3026 aa11.6□□□□□ -0.55
PDZD4-201ENST00000164640 C11orf86A6NJI1 115 aa11.59□□□□□ -0.55
PDZD4-201ENST00000164640 RNASE4P34096 147 aaKnown RBP11.59□□□□□ -0.55
PDZD4-201ENST00000164640 FANCD2OSQ96PS1 177 aa11.59□□□□□ -0.55
PDZD4-201ENST00000164640 SLC50A1Q9BRV3 221 aa11.59□□□□□ -0.55
PDZD4-201ENST00000164640 CTSGP08311 255 aa11.59□□□□□ -0.55
PDZD4-201ENST00000164640 SHISA2Q6UWI4 295 aa11.59□□□□□ -0.55
PDZD4-201ENST00000164640 Q6ZS46 218 aa11.59□□□□□ -0.55
PDZD4-201ENST00000164640 C10orf126Q8N4M7 172 aa11.59□□□□□ -0.55
PDZD4-201ENST00000164640 METTL26Q96S19 204 aa11.59□□□□□ -0.55
PDZD4-201ENST00000164640 ASIPP42127 132 aa11.58□□□□□ -0.55
PDZD4-201ENST00000164640 NDUFV3P56181 108 aaKnown RBP11.58□□□□□ -0.55
PDZD4-201ENST00000164640 C15orf53Q8NAA6 179 aa11.58□□□□□ -0.55
PDZD4-201ENST00000164640 IGLV2-18A0A075B6J9 118 aa11.58□□□□□ -0.56
PDZD4-201ENST00000164640 CRIP2P52943 208 aaPredicted RBP11.58□□□□□ -0.56
PDZD4-201ENST00000164640 FAM159AQ6UWV7 190 aa11.58□□□□□ -0.56
PDZD4-201ENST00000164640 C8orf31Q8N9H6 132 aa11.58□□□□□ -0.56
PDZD4-201ENST00000164640 TRBV7-9A0A0J9YWB2 115 aa11.58□□□□□ -0.56
PDZD4-201ENST00000164640 A4D1N5 150 aa11.58□□□□□ -0.56
PDZD4-201ENST00000164640 NUP37Q8NFH4 326 aa11.58□□□□□ -0.56
PDZD4-201ENST00000164640 RASL10AQ92737 203 aa11.58□□□□□ -0.56
PDZD4-201ENST00000164640 RPL39P62891 51 aaKnown RBP11.57□□□□□ -0.56
PDZD4-201ENST00000164640 ADARB2-AS1A8MUL3 147 aa11.57□□□□□ -0.56
PDZD4-201ENST00000164640 CFAP161Q6P656 301 aa11.57□□□□□ -0.56
PDZD4-201ENST00000164640 NEXN-AS1Q8NBZ9 246 aa11.57□□□□□ -0.56
PDZD4-201ENST00000164640 DEFB124Q8NES8 71 aa11.57□□□□□ -0.56
PDZD4-201ENST00000164640 DPH3P1Q9H4G8 78 aa11.57□□□□□ -0.56
PDZD4-201ENST00000164640 A0A087WWL8 130 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms