RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 ADORA2A-AS1P86434 159 aa10.71□□□□□ -0.7
USH1C-201ENST00000005226 SRSF1Q07955 248 aaKnown RBP eCLIP10.71□□□□□ -0.7
USH1C-201ENST00000005226 C11orf71Q6IPW1 123 aa10.71□□□□□ -0.7
USH1C-201ENST00000005226 RBAKDNA6NC62 111 aa10.7□□□□□ -0.7
USH1C-201ENST00000005226 GLMPQ8WWB7 406 aa10.7□□□□□ -0.7
USH1C-201ENST00000005226 METTL26Q96S19 204 aa10.7□□□□□ -0.7
USH1C-201ENST00000005226 SIRPDQ9H106 197 aa10.7□□□□□ -0.7
USH1C-201ENST00000005226 GTSF1LQ9H1H1 148 aa10.7□□□□□ -0.7
USH1C-201ENST00000005226 SMPXQ9UHP9 88 aa10.7□□□□□ -0.7
USH1C-201ENST00000005226 C14orf178Q8N769 122 aaPredicted RBP10.7□□□□□ -0.7
USH1C-201ENST00000005226 ZNF479Q96JC4 524 aa10.7□□□□□ -0.7
USH1C-201ENST00000005226 E9PLD3 99 aa10.69□□□□□ -0.7
USH1C-201ENST00000005226 MINOS1Q5TGZ0 78 aa10.69□□□□□ -0.7
USH1C-201ENST00000005226 HIF1ANQ9NWT6 349 aa10.69□□□□□ -0.7
USH1C-201ENST00000005226 MINOS1-NBL1R4GNA1 71 aa10.69□□□□□ -0.7
USH1C-201ENST00000005226 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.69□□□□□ -0.7
USH1C-201ENST00000005226 SFTA2Q6UW10 78 aa10.69□□□□□ -0.7
USH1C-201ENST00000005226 CYSLTR1Q9Y271 337 aa10.69□□□□□ -0.7
USH1C-201ENST00000005226 VPS13CQ709C8 3753 aa10.68□□□□□ -0.7
USH1C-201ENST00000005226 F6UB75 175 aa10.68□□□□□ -0.7
USH1C-201ENST00000005226 K7ENP7 123 aa10.68□□□□□ -0.7
USH1C-201ENST00000005226 TRBV12-3P01733 135 aa10.68□□□□□ -0.7
USH1C-201ENST00000005226 SCGB3A1Q96QR1 104 aa10.68□□□□□ -0.7
USH1C-201ENST00000005226 ETDBQ3ZM63 59 aa10.68□□□□□ -0.7
USH1C-201ENST00000005226 FOXI2Q6ZQN5 318 aa10.68□□□□□ -0.7
USH1C-201ENST00000005226 EEF1AKMT3Q96AZ1 226 aa10.68□□□□□ -0.7
USH1C-201ENST00000005226 SMIM2Q9BVW6 85 aa10.68□□□□□ -0.7
USH1C-201ENST00000005226 OOSP1A8MZH6 123 aa10.67□□□□□ -0.7
USH1C-201ENST00000005226 MGPP08493 103 aa10.67□□□□□ -0.7
USH1C-201ENST00000005226 UNQ9165/PRO28630Q6UXU0 137 aa10.67□□□□□ -0.7
USH1C-201ENST00000005226 C9orf47Q6ZRZ4 202 aa10.67□□□□□ -0.7
USH1C-201ENST00000005226 RASL10AQ92737 203 aa10.67□□□□□ -0.7
USH1C-201ENST00000005226 C1orf122Q6ZSJ8 110 aa10.67□□□□□ -0.7
USH1C-201ENST00000005226 CHTOPQ9Y3Y2 248 aaKnown RBP10.67□□□□□ -0.7
USH1C-201ENST00000005226 TSSC4Q9Y5U2 329 aaPredicted RBP10.67□□□□□ -0.7
USH1C-201ENST00000005226 GNRH2O43555 120 aa10.66□□□□□ -0.7
USH1C-201ENST00000005226 RAB9AP51151 201 aa10.66□□□□□ -0.7
USH1C-201ENST00000005226 INSL3P51460 131 aa10.66□□□□□ -0.7
USH1C-201ENST00000005226 EMP1P54849 157 aa10.66□□□□□ -0.7
USH1C-201ENST00000005226 FBXL19-AS1Q494R0 122 aa10.66□□□□□ -0.7
USH1C-201ENST00000005226 H7C1H1 209 aa10.66□□□□□ -0.7
USH1C-201ENST00000005226 S100A4P26447 101 aaKnown RBP10.66□□□□□ -0.7
USH1C-201ENST00000005226 ATP5G2Q06055 141 aa10.66□□□□□ -0.7
USH1C-201ENST00000005226 SMAGPQ0VAQ4 97 aa10.66□□□□□ -0.7
USH1C-201ENST00000005226 WFDC12Q8WWY7 111 aa10.66□□□□□ -0.7
USH1C-201ENST00000005226 SPANXB1Q9NS25 103 aaPredicted RBP10.66□□□□□ -0.7
USH1C-201ENST00000005226 F8VRH5 84 aa10.65□□□□□ -0.7
USH1C-201ENST00000005226 AZU1P20160 251 aa10.65□□□□□ -0.7
USH1C-201ENST00000005226 RPL11P62913 178 aaKnown RBP10.65□□□□□ -0.7
USH1C-201ENST00000005226 TRBV7-3A0A075B6L6 115 aa10.65□□□□□ -0.7
USH1C-201ENST00000005226 CENPVL3A0A0U1RRI6 287 aa10.65□□□□□ -0.7
USH1C-201ENST00000005226 RNASE4P34096 147 aaKnown RBP10.65□□□□□ -0.7
USH1C-201ENST00000005226 PRSS47A8MTI9 375 aa10.64□□□□□ -0.71
USH1C-201ENST00000005226 OR11H12B2RN74 326 aa10.64□□□□□ -0.71
USH1C-201ENST00000005226 IGHV3-11P01762 117 aa10.64□□□□□ -0.71
USH1C-201ENST00000005226 PLNP26678 52 aa10.64□□□□□ -0.71
USH1C-201ENST00000005226 UBE2E1P51965 193 aa10.64□□□□□ -0.71
USH1C-201ENST00000005226 SUMO2P61956 95 aaKnown RBP10.64□□□□□ -0.71
USH1C-201ENST00000005226 ANXA2RQ3ZCQ2 193 aa10.64□□□□□ -0.71
USH1C-201ENST00000005226 SAMD13Q5VXD3 122 aa10.64□□□□□ -0.71
USH1C-201ENST00000005226 GPHB5Q86YW7 130 aa10.64□□□□□ -0.71
USH1C-201ENST00000005226 KLHL30-AS1Q8NEE0 82 aa10.64□□□□□ -0.71
USH1C-201ENST00000005226 OR11H1Q8NG94 326 aa10.64□□□□□ -0.71
USH1C-201ENST00000005226 OR11H2Q8NH07 326 aa10.64□□□□□ -0.71
USH1C-201ENST00000005226 MYMXA0A1B0GTQ4 84 aa10.64□□□□□ -0.71
USH1C-201ENST00000005226 SRD5A1P18405 259 aa10.64□□□□□ -0.71
USH1C-201ENST00000005226 PSMG4Q5JS54 123 aa10.64□□□□□ -0.71
USH1C-201ENST00000005226 ZFAND2AQ8N6M9 145 aa10.64□□□□□ -0.71
USH1C-201ENST00000005226 U3KQE9 123 aa10.64□□□□□ -0.71
USH1C-201ENST00000005226 IGHV4-4A0A075B6R2 117 aa10.64□□□□□ -0.71
USH1C-201ENST00000005226 PLEKHB2Q96CS7 222 aa10.64□□□□□ -0.71
USH1C-201ENST00000005226 SPAG8Q99932 426 aaPredicted RBP10.64□□□□□ -0.71
USH1C-201ENST00000005226 UBTD1Q9HAC8 227 aa10.64□□□□□ -0.71
USH1C-201ENST00000005226 LGALS1P09382 135 aaKnown RBP10.63□□□□□ -0.71
USH1C-201ENST00000005226 C2orf66Q6UXQ4 117 aa10.63□□□□□ -0.71
USH1C-201ENST00000005226 NEXN-AS1Q8NBZ9 246 aa10.63□□□□□ -0.71
USH1C-201ENST00000005226 PHLDA3Q9Y5J5 127 aa10.63□□□□□ -0.71
USH1C-201ENST00000005226 HIVEP3Q5T1R4 2406 aa10.63□□□□□ -0.71
USH1C-201ENST00000005226 TRBV7-1A0A0A6YYK4 115 aa10.63□□□□□ -0.71
USH1C-201ENST00000005226 PRSS29PA6NIE9 313 aa10.63□□□□□ -0.71
USH1C-201ENST00000005226 RNF223E7ERA6 249 aa10.63□□□□□ -0.71
USH1C-201ENST00000005226 HLA-DRB4P13762 266 aa10.63□□□□□ -0.71
USH1C-201ENST00000005226 RRN3P1Q2M238 152 aa10.63□□□□□ -0.71
USH1C-201ENST00000005226 C5orf56Q8N8D9 126 aa10.63□□□□□ -0.71
USH1C-201ENST00000005226 BAALCQ8WXS3 180 aa10.63□□□□□ -0.71
USH1C-201ENST00000005226 PRADC1Q9BSG0 188 aa10.63□□□□□ -0.71
USH1C-201ENST00000005226 BPESC1Q9GZL8 116 aa10.63□□□□□ -0.71
USH1C-201ENST00000005226 RAXQ9Y2V3 346 aa10.63□□□□□ -0.71
USH1C-201ENST00000005226 HLA-DRB4X5D2U9 266 aa10.63□□□□□ -0.71
USH1C-201ENST00000005226 ARL3P36405 182 aa10.62□□□□□ -0.71
USH1C-201ENST00000005226 BRD3OSQ6XYD6 125 aa10.62□□□□□ -0.71
USH1C-201ENST00000005226 ITLN2Q8WWU7 325 aaPredicted RBP10.62□□□□□ -0.71
USH1C-201ENST00000005226 TOMM6Q96B49 74 aa10.62□□□□□ -0.71
USH1C-201ENST00000005226 MRAP2Q96G30 205 aa10.62□□□□□ -0.71
USH1C-201ENST00000005226 JPT2Q9H910 190 aa10.62□□□□□ -0.71
USH1C-201ENST00000005226 SLC25A16P16260 332 aa10.62□□□□□ -0.71
USH1C-201ENST00000005226 SCGB2A2Q13296 93 aa10.62□□□□□ -0.71
USH1C-201ENST00000005226 CD300EQ496F6 205 aaPredicted RBP10.62□□□□□ -0.71
USH1C-201ENST00000005226 TRAV41A0A0B4J266 112 aa10.61□□□□□ -0.71
USH1C-201ENST00000005226 GAGE12HA6NDE8 117 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms