RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Zswim8Q3UHH1 1832 aaKnown RBP12.51□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Igkv4-50A0A0B4J1J0 117 aa12.51□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Trav12d-1A0N8R0 115 aa12.51□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Zglp1Q1WG82 266 aa12.51□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Ssbp4Q3U4B1 363 aa12.51□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Trdv2-2Q5R1A4 116 aa12.51□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Gm10118Q8C8J5 116 aa12.51□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Q8VE95 218 aa12.51□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 9930021J03RikH3BKP8 2027 aa12.51□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Fam53bQ8BGR5 422 aa12.51□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Rita1Q9D1H0 253 aa12.51□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Mixl1Q9WUI0 231 aa12.51□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Trav18A0A075B656 109 aa12.51□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Olfr175-ps1A0A140T8K4 308 aa12.51□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Ly6g6fB2RXM6 300 aa12.51□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 CebpbP28033 296 aa12.51□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 RflnaQ7TS73 204 aa12.51□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Nhlrc3Q8CCH2 347 aa12.51□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Rtn4rQ99PI8 473 aa12.51□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 DnlzQ9D113 177 aa12.51□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Urb1Q571H0 2274 aaKnown RBP12.51□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 RttnQ8R4Y8 2226 aa12.51□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Olfr466E9Q2B9 308 aa12.5□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Gm10665K7N6B7 321 aa12.5□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Tcrg-V1P06325 135 aa12.5□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Defa3P28310 93 aa12.5□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Defa10P50708 93 aa12.5□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Defa15P50713 93 aa12.5□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Arf6P62331 175 aa12.5□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Anapc10Q8K2H6 185 aa12.5□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Lime1Q9EQR5 269 aa12.5□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Pcm1Q9R0L6 2025 aa12.5□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 C2cd4aE9Q861 334 aa12.5□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Snrpd3P62320 126 aaKnown RBP12.5□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Atp5lQ9CPQ8 103 aa12.5□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Trav6d-5A0A075B6B9 112 aa12.5□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Gm6812B1AXU1 112 aa12.5□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Smim13E9Q942 88 aa12.5□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 1700020N15RikL7MTX3 112 aa12.5□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Ifitm5O88728 134 aa12.5□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Klk1b22P15948 259 aa12.5□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 CampP51437 172 aa12.5□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Gfra1P97785 468 aa12.5□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Shisa6Q3UH99 525 aa12.5□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Gm5615Q3UW02 101 aa12.5□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 PgpQ8CHP8 321 aa12.5□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Tmem189Q99LQ7 271 aa12.5□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Gm21719J3KMI9 230 aa12.5□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Gm21882J3QN86 361 aa12.5□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Ascl2O35885 263 aa12.5□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Adrb3P25962 400 aa12.5□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Gpr35Q9ES90 307 aa12.5□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Tmem29A2ANF5 204 aa12.49□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Fam3dP97805 223 aa12.49□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Mob4Q6PEB6 225 aa12.49□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Gm21789J3QMZ1 123 aa12.49□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Gm21870J3QPN2 123 aa12.49□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Gm21883J3QPV3 123 aa12.49□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Ccl2P10148 148 aa12.49□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 G0s2Q61585 103 aa12.49□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Zfp677Q6PEP4 634 aa12.49□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 C1ql2Q8CFR0 287 aa12.49□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Cnn3Q9DAW9 330 aaKnown RBP12.49□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Frrs1lB1AXV0 293 aa12.49□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Gpr132Q9Z282 382 aa12.49□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Iqcf6G3UWF2 157 aa12.49□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Spock3Q8BKV0 436 aa12.49□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Trpt1Q8K3A2 249 aa12.49□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Vmn1r235Q8R297 328 aa12.49□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 St6galnac3Q9WUV2 305 aa12.49□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Gm37797A0A1D5RLC8 261 aa12.48□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Olfr1016A2ASV2 309 aa12.48□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Spink11Q09TK7 88 aa12.48□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Nkain3Q3URJ8 181 aa12.48□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 SostQ99P68 211 aa12.48□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Q9CQM1 111 aa12.48□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Atad5Q4QY64 1826 aa12.48□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Ren2P00796 401 aa12.48□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Prss44Q402U7 372 aa12.48□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Dock5B2RY04 1868 aa12.48□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Mrpl51Q9CPY1 128 aa12.48□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 ChtopQ9CY57 249 aaKnown RBP12.48□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Sh2d6Q9D413 297 aa12.48□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Tmem139E9PX92 214 aa12.48□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Olfr177E9Q7W1 309 aa12.48□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Acrv1P50289 261 aa12.48□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Eda2rQ8BX35 297 aa12.48□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Trav6n-5A0A075B621 112 aa12.47□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Trav6-5A0A075B6B5 112 aa12.47□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Dlx6P70397 175 aa12.47□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Npc2Q9Z0J0 149 aa12.47□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Gm21913J3KML9 361 aa12.47□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Gm21776J3QPJ5 361 aa12.47□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Wnt5bP22726 359 aa12.47□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 MlanaQ2TA50 113 aa12.47□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Q9DAA3 117 aa12.47□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 eef1akmt3D3YWP0 232 aa12.47□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Mst1P26928 716 aa12.47□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Tbr1Q64336 681 aa12.47□□□□□ -0.41
Pcdh20-201ENSMUST00000061628 Vkorc1l1Q6TEK5 176 aa12.47□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 27.3 ms