RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Vmn1r197Q8R265 298 aa14.3□□□□□ -0.12
Col17a1-201ENSMUST00000026045 Olfr477Q8VGI6 310 aa14.3□□□□□ -0.12
Col17a1-201ENSMUST00000026045 Urb1Q571H0 2274 aaKnown RBP14.29□□□□□ -0.12
Col17a1-201ENSMUST00000026045 LtbP41155 306 aa14.29□□□□□ -0.12
Col17a1-201ENSMUST00000026045 OsmP53347 263 aa14.29□□□□□ -0.12
Col17a1-201ENSMUST00000026045 Fam57aQ5ND56 257 aa14.29□□□□□ -0.12
Col17a1-201ENSMUST00000026045 GgnQ80WJ1 673 aa14.29□□□□□ -0.12
Col17a1-201ENSMUST00000026045 SowahbQ8BZW2 760 aa14.29□□□□□ -0.12
Col17a1-201ENSMUST00000026045 Rnf126Q91YL2 313 aa14.29□□□□□ -0.12
Col17a1-201ENSMUST00000026045 Tmem29A2ANF5 204 aa14.29□□□□□ -0.12
Col17a1-201ENSMUST00000026045 Shisal1Q0VBP7 198 aa14.29□□□□□ -0.12
Col17a1-201ENSMUST00000026045 Zfp72Q0VFY0 435 aa14.29□□□□□ -0.12
Col17a1-201ENSMUST00000026045 AamdcQ8R0P4 122 aa14.29□□□□□ -0.12
Col17a1-201ENSMUST00000026045 Trav7-4A0A075B6C1 113 aa14.29□□□□□ -0.12
Col17a1-201ENSMUST00000026045 Ighv1-42A0A0A6YY38 117 aa14.29□□□□□ -0.12
Col17a1-201ENSMUST00000026045 Gm5819E9PZ96 154 aa14.29□□□□□ -0.12
Col17a1-201ENSMUST00000026045 B4galt1P15535 399 aa14.29□□□□□ -0.12
Col17a1-201ENSMUST00000026045 Trav7d-4Q5R1H9 113 aa14.29□□□□□ -0.12
Col17a1-201ENSMUST00000026045 Unc119Q9Z2R6 240 aa14.29□□□□□ -0.12
Col17a1-201ENSMUST00000026045 Gprin2D3Z1D7 455 aa14.29□□□□□ -0.12
Col17a1-201ENSMUST00000026045 Zdhhc23Q5Y5T3 425 aa14.29□□□□□ -0.12
Col17a1-201ENSMUST00000026045 Ccsmst1Q6RUT7 136 aa14.29□□□□□ -0.12
Col17a1-201ENSMUST00000026045 Fscn3Q9QXW4 498 aa14.29□□□□□ -0.12
Col17a1-201ENSMUST00000026045 Csf2rb2P26954 878 aa14.28□□□□□ -0.12
Col17a1-201ENSMUST00000026045 Atp6v0bQ91V37 205 aa14.28□□□□□ -0.12
Col17a1-201ENSMUST00000026045 Tmem178aQ9CZ16 297 aa14.28□□□□□ -0.12
Col17a1-201ENSMUST00000026045 Gm42517A0A1Y7VLQ2 374 aa14.28□□□□□ -0.12
Col17a1-201ENSMUST00000026045 NrtnP97463 195 aa14.28□□□□□ -0.12
Col17a1-201ENSMUST00000026045 Sf3b5Q923D4 86 aaKnown RBP14.28□□□□□ -0.12
Col17a1-201ENSMUST00000026045 P18533 117 aa14.28□□□□□ -0.12
Col17a1-201ENSMUST00000026045 Prickle3Q80VL3 624 aa14.28□□□□□ -0.12
Col17a1-201ENSMUST00000026045 Olfr365Q8VFT2 312 aa14.28□□□□□ -0.12
Col17a1-201ENSMUST00000026045 Rita1Q9D1H0 253 aa14.28□□□□□ -0.12
Col17a1-201ENSMUST00000026045 Kntc1Q8C3Y4 2207 aa14.28□□□□□ -0.12
Col17a1-201ENSMUST00000026045 C2cd4aE9Q861 334 aa14.28□□□□□ -0.12
Col17a1-201ENSMUST00000026045 Mpc1P63030 109 aa14.28□□□□□ -0.12
Col17a1-201ENSMUST00000026045 UngP97931 306 aa14.28□□□□□ -0.12
Col17a1-201ENSMUST00000026045 Bst1Q64277 311 aa14.28□□□□□ -0.12
Col17a1-201ENSMUST00000026045 Mrps18cQ8R2L5 143 aaKnown RBP14.28□□□□□ -0.12
Col17a1-201ENSMUST00000026045 Cox6cQ9CPQ1 76 aa14.28□□□□□ -0.12
Col17a1-201ENSMUST00000026045 Esp23A8R0V5 104 aa14.28□□□□□ -0.12
Col17a1-201ENSMUST00000026045 Tnfsf11O35235 316 aa14.28□□□□□ -0.12
Col17a1-201ENSMUST00000026045 NmsQ5H8A1 153 aa14.28□□□□□ -0.12
Col17a1-201ENSMUST00000026045 Plppr1Q8BFZ2 325 aa14.28□□□□□ -0.12
Col17a1-201ENSMUST00000026045 C730034F03RikQ8BGL5 111 aa14.28□□□□□ -0.12
Col17a1-201ENSMUST00000026045 Bpifa5Q9CQX3 270 aa14.28□□□□□ -0.12
Col17a1-201ENSMUST00000026045 Ap5s1Q9D742 170 aa14.28□□□□□ -0.12
Col17a1-201ENSMUST00000026045 Igf2rQ07113 2483 aaKnown RBP14.27□□□□□ -0.12
Col17a1-201ENSMUST00000026045 Rln3Q8CHK2 141 aa14.27□□□□□ -0.12
Col17a1-201ENSMUST00000026045 SostQ99P68 211 aa14.27□□□□□ -0.12
Col17a1-201ENSMUST00000026045 1500009C09RikD3YYW9 81 aa14.27□□□□□ -0.12
Col17a1-201ENSMUST00000026045 A630023A22RikJ3QP60 199 aa14.27□□□□□ -0.12
Col17a1-201ENSMUST00000026045 2410004P03RikA0A087WQY2 205 aa14.27□□□□□ -0.13
Col17a1-201ENSMUST00000026045 Fam240bJ3QMB3 78 aa14.27□□□□□ -0.13
Col17a1-201ENSMUST00000026045 A630076J17RikJ3QQ32 107 aa14.27□□□□□ -0.13
Col17a1-201ENSMUST00000026045 CrxO54751 299 aa14.27□□□□□ -0.13
Col17a1-201ENSMUST00000026045 Evx1P23683 416 aa14.27□□□□□ -0.13
Col17a1-201ENSMUST00000026045 Scn2aA0A0J9YTW6 2006 aa14.27□□□□□ -0.13
Col17a1-201ENSMUST00000026045 Vmn1r1E9PVR6 306 aa14.27□□□□□ -0.13
Col17a1-201ENSMUST00000026045 Mst1P26928 716 aa14.27□□□□□ -0.13
Col17a1-201ENSMUST00000026045 Chrdl2Q8VEA6 426 aa14.27□□□□□ -0.13
Col17a1-201ENSMUST00000026045 Prss37Q9DAA4 237 aa14.27□□□□□ -0.13
Col17a1-201ENSMUST00000026045 Cldn10Q9Z0S6 231 aa14.27□□□□□ -0.13
Col17a1-201ENSMUST00000026045 Fgf4P11403 202 aa14.26□□□□□ -0.13
Col17a1-201ENSMUST00000026045 AY761184Q9D848 116 aa14.26□□□□□ -0.13
Col17a1-201ENSMUST00000026045 Mmp23O88676 391 aa14.26□□□□□ -0.13
Col17a1-201ENSMUST00000026045 Ighv1-47A0A0A6YY41 117 aa14.26□□□□□ -0.13
Col17a1-201ENSMUST00000026045 Gm20939L7N243 523 aa14.26□□□□□ -0.13
Col17a1-201ENSMUST00000026045 Nabp1Q8BGW5 198 aa14.26□□□□□ -0.13
Col17a1-201ENSMUST00000026045 9330161L09RikQ9D253 136 aa14.26□□□□□ -0.13
Col17a1-201ENSMUST00000026045 Olfr1331K7N684 317 aa14.26□□□□□ -0.13
Col17a1-201ENSMUST00000026045 GfralQ6SJE0 393 aa14.26□□□□□ -0.13
Col17a1-201ENSMUST00000026045 Olfr1333Q7TQV7 317 aa14.26□□□□□ -0.13
Col17a1-201ENSMUST00000026045 Wbp1lQ8BGW2 348 aa14.26□□□□□ -0.13
Col17a1-201ENSMUST00000026045 Klre1Q8CJC7 226 aa14.26□□□□□ -0.13
Col17a1-201ENSMUST00000026045 ChtopQ9CY57 249 aaKnown RBP14.26□□□□□ -0.13
Col17a1-201ENSMUST00000026045 4933402D24RikQ9D4D3 167 aa14.26□□□□□ -0.13
Col17a1-201ENSMUST00000026045 TbpP29037 316 aa14.25□□□□□ -0.13
Col17a1-201ENSMUST00000026045 Zfp119aQ9JIC0 545 aa14.25□□□□□ -0.13
Col17a1-201ENSMUST00000026045 Trpm7Q923J1 1863 aa14.25□□□□□ -0.13
Col17a1-201ENSMUST00000026045 Gm10097J3KMK7 105 aa14.25□□□□□ -0.13
Col17a1-201ENSMUST00000026045 Rnase9P60154 184 aa14.25□□□□□ -0.13
Col17a1-201ENSMUST00000026045 Olfr358Q7TRY5 330 aa14.25□□□□□ -0.13
Col17a1-201ENSMUST00000026045 Cend1Q9JKC6 149 aa14.25□□□□□ -0.13
Col17a1-201ENSMUST00000026045 Pglyrp3A1A547 347 aa14.25□□□□□ -0.13
Col17a1-201ENSMUST00000026045 Gm7849D3YX03 116 aa14.25□□□□□ -0.13
Col17a1-201ENSMUST00000026045 Tspan13Q9D8C2 204 aa14.25□□□□□ -0.13
Col17a1-201ENSMUST00000026045 Thsd7bQ6P4U0 1607 aa14.25□□□□□ -0.13
Col17a1-201ENSMUST00000026045 Fam19a2Q7TPG7 131 aa14.25□□□□□ -0.13
Col17a1-201ENSMUST00000026045 Tmem160Q9D938 188 aa14.25□□□□□ -0.13
Col17a1-201ENSMUST00000026045 NgbQ9ER97 151 aa14.25□□□□□ -0.13
Col17a1-201ENSMUST00000026045 Tstd1E9PY03 133 aa14.25□□□□□ -0.13
Col17a1-201ENSMUST00000026045 B430218F22RikQ8BQR5 223 aa14.25□□□□□ -0.13
Col17a1-201ENSMUST00000026045 Gm5111Q8C9M4 190 aa14.25□□□□□ -0.13
Col17a1-201ENSMUST00000026045 Vmn1r237Q8R296 289 aa14.25□□□□□ -0.13
Col17a1-201ENSMUST00000026045 Dock1Q8BUR4 1865 aa14.24□□□□□ -0.13
Col17a1-201ENSMUST00000026045 Trav8-1A0A075B641 109 aa14.24□□□□□ -0.13
Col17a1-201ENSMUST00000026045 Gm6970F7DCP6 221 aa14.24□□□□□ -0.13
Col17a1-201ENSMUST00000026045 CiartQ3TQ03 375 aa14.24□□□□□ -0.13
Col17a1-201ENSMUST00000026045 Olfr433Q7TRV9 314 aa14.24□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 32.7 ms