RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, human

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-223	ENST00000641597	DOPEY2	Q9Y3R5	2298 aa		12.9	□□□□□ -0.34
PHGDH-223	ENST00000641597	CACNA1A	O00555	2505 aa		12.89	□□□□□ -0.35
PHGDH-223	ENST00000641597	PRR9	Q5T870	116 aa		12.89	□□□□□ -0.35
PHGDH-223	ENST00000641597	IGKV3-7	A0A075B6H7	116 aa		12.89	□□□□□ -0.35
PHGDH-223	ENST00000641597	TRAV40	A0A0B4J280	105 aa		12.89	□□□□□ -0.35
PHGDH-223	ENST00000641597	HBD	P02042	147 aa		12.89	□□□□□ -0.35
PHGDH-223	ENST00000641597	VAMP3	Q15836	100 aa		12.89	□□□□□ -0.35
PHGDH-223	ENST00000641597	PIFO	Q8TCI5	191 aa		12.89	□□□□□ -0.35
PHGDH-223	ENST00000641597	RNASE8	Q8TDE3	154 aa	Known RBP	12.89	□□□□□ -0.35
PHGDH-223	ENST00000641597	TTTY13	Q9BZ97	58 aa		12.89	□□□□□ -0.35
PHGDH-223	ENST00000641597	IGHV3-11	P01762	117 aa		12.88	□□□□□ -0.35
PHGDH-223	ENST00000641597	COX8A	P10176	69 aa		12.88	□□□□□ -0.35
PHGDH-223	ENST00000641597	FGF6	P10767	208 aa		12.88	□□□□□ -0.35
PHGDH-223	ENST00000641597	UBE2V1	Q13404	147 aa		12.88	□□□□□ -0.35
PHGDH-223	ENST00000641597		Q6ZS46	218 aa		12.88	□□□□□ -0.35
PHGDH-223	ENST00000641597	C20orf173	Q96LM9	149 aa		12.88	□□□□□ -0.35
PHGDH-223	ENST00000641597	SMAD7	O15105	426 aa	Known RBP	12.88	□□□□□ -0.35
PHGDH-223	ENST00000641597	PCP2	Q8IVA1	136 aa		12.88	□□□□□ -0.35
PHGDH-223	ENST00000641597	SCGB2A1	O75556	95 aa		12.87	□□□□□ -0.35
PHGDH-223	ENST00000641597	IFI27L1	Q96BM0	104 aa		12.87	□□□□□ -0.35
PHGDH-223	ENST00000641597	NAA38	Q9BRA0	125 aa	Known RBP	12.87	□□□□□ -0.35
PHGDH-223	ENST00000641597	IGHV4-61	A0A0C4DH41	118 aa		12.87	□□□□□ -0.35
PHGDH-223	ENST00000641597	TNFRSF6B	O95407	300 aa		12.87	□□□□□ -0.35
PHGDH-223	ENST00000641597	IGHV4-38-2	P0DP08	117 aa		12.87	□□□□□ -0.35
PHGDH-223	ENST00000641597	EEF1AKMT3	Q96AZ1	226 aa		12.87	□□□□□ -0.35
PHGDH-223	ENST00000641597	LEP	P41159	167 aa		12.86	□□□□□ -0.35
PHGDH-223	ENST00000641597	METTL26	Q96S19	204 aa		12.86	□□□□□ -0.35
PHGDH-223	ENST00000641597	MS4A6A	Q9H2W1	248 aa		12.86	□□□□□ -0.35
PHGDH-223	ENST00000641597	TRAV41	A0A0B4J266	112 aa		12.86	□□□□□ -0.35
PHGDH-223	ENST00000641597	KIR3DS1	Q14943	382 aa		12.86	□□□□□ -0.35
PHGDH-223	ENST00000641597	LINC01559	Q495D7	138 aa		12.86	□□□□□ -0.35
PHGDH-223	ENST00000641597	UFC1	Q9Y3C8	167 aa		12.86	□□□□□ -0.35
PHGDH-223	ENST00000641597	RPS20	P60866	119 aa	Known RBP	12.85	□□□□□ -0.35
PHGDH-223	ENST00000641597	ATP5G2	Q06055	141 aa		12.85	□□□□□ -0.35
PHGDH-223	ENST00000641597	DEFB125	Q8N687	156 aa		12.85	□□□□□ -0.35
PHGDH-223	ENST00000641597	KLK15	Q9H2R5	256 aa		12.85	□□□□□ -0.35
PHGDH-223	ENST00000641597	EDN2	P20800	178 aa		12.85	□□□□□ -0.35
PHGDH-223	ENST00000641597	NMU	P48645	174 aa		12.85	□□□□□ -0.35
PHGDH-223	ENST00000641597	HIST1H1A	Q02539	215 aa	Predicted RBP	12.84	□□□□□ -0.35
PHGDH-223	ENST00000641597	AMMECR1L	Q6DCA0	310 aa		12.84	□□□□□ -0.35
PHGDH-223	ENST00000641597	IGHV7-4-1	A0A0J9YVY3	117 aa		12.84	□□□□□ -0.35
PHGDH-223	ENST00000641597	FBLL1	A6NHQ2	334 aa	Known RBP	12.84	□□□□□ -0.35
PHGDH-223	ENST00000641597		F6UB75	175 aa		12.84	□□□□□ -0.35
PHGDH-223	ENST00000641597	TM4SF20	Q53R12	229 aa		12.84	□□□□□ -0.35
PHGDH-223	ENST00000641597	TMEM78	Q5T7P6	136 aa		12.84	□□□□□ -0.35
PHGDH-223	ENST00000641597	GLMP	Q8WWB7	406 aa		12.84	□□□□□ -0.35
PHGDH-223	ENST00000641597	CNFN	Q9BYD5	112 aa		12.84	□□□□□ -0.35
PHGDH-223	ENST00000641597	SORL1	Q92673	2214 aa		12.84	□□□□□ -0.35
PHGDH-223	ENST00000641597	TRAV8-6	A0A0B4J262	113 aa		12.83	□□□□□ -0.35
PHGDH-223	ENST00000641597		H3BVH4	76 aa		12.83	□□□□□ -0.35
PHGDH-223	ENST00000641597	BLCAP	P62952	87 aa		12.83	□□□□□ -0.35
PHGDH-223	ENST00000641597	GPHB5	Q86YW7	130 aa		12.83	□□□□□ -0.35
PHGDH-223	ENST00000641597	TMEM190	Q8WZ59	177 aa		12.83	□□□□□ -0.35
PHGDH-223	ENST00000641597	C16orf92	Q96LL3	132 aa		12.83	□□□□□ -0.35
PHGDH-223	ENST00000641597	MAP1LC3A	Q9H492	121 aa		12.83	□□□□□ -0.35
PHGDH-223	ENST00000641597	MXRA5	Q9NR99	2828 aa		12.83	□□□□□ -0.36
PHGDH-223	ENST00000641597	IGKV2D-26	A0A0A0MRZ7	120 aa		12.83	□□□□□ -0.36
PHGDH-223	ENST00000641597	C12orf54	Q6X4T0	127 aa		12.83	□□□□□ -0.36
PHGDH-223	ENST00000641597	SLC50A1	Q9BRV3	221 aa		12.83	□□□□□ -0.36
PHGDH-223	ENST00000641597	SRD5A1	P18405	259 aa		12.82	□□□□□ -0.36
PHGDH-223	ENST00000641597	LGALS9B	Q3B8N2	356 aa		12.82	□□□□□ -0.36
PHGDH-223	ENST00000641597	LGALS9C	Q6DKI2	356 aa		12.82	□□□□□ -0.36
PHGDH-223	ENST00000641597	FAM208B	Q5VWN6	2430 aa		12.82	□□□□□ -0.36
PHGDH-223	ENST00000641597	DOPEY1	Q5JWR5	2465 aa		12.82	□□□□□ -0.36
PHGDH-223	ENST00000641597	TRBV7-1	A0A0A6YYK4	115 aa		12.82	□□□□□ -0.36
PHGDH-223	ENST00000641597	ARL3	P36405	182 aa		12.82	□□□□□ -0.36
PHGDH-223	ENST00000641597	ARL6IP6	Q8N6S5	226 aa		12.82	□□□□□ -0.36
PHGDH-223	ENST00000641597	OR4C5	Q8NGB2	326 aa		12.82	□□□□□ -0.36
PHGDH-223	ENST00000641597	TMEM158	Q8WZ71	300 aa		12.82	□□□□□ -0.36
PHGDH-223	ENST00000641597	FBN2	P35556	2912 aa		12.82	□□□□□ -0.36
PHGDH-223	ENST00000641597		K7EP13	123 aa		12.81	□□□□□ -0.36
PHGDH-223	ENST00000641597	DEFB104A	Q8WTQ1	72 aa		12.81	□□□□□ -0.36
PHGDH-223	ENST00000641597	NRGN	Q92686	78 aa		12.81	□□□□□ -0.36
PHGDH-223	ENST00000641597	MOB4	Q9Y3A3	225 aa		12.81	□□□□□ -0.36
PHGDH-223	ENST00000641597		U3KQE9	123 aa		12.81	□□□□□ -0.36
PHGDH-223	ENST00000641597	ACACB	O00763	2458 aa		12.81	□□□□□ -0.36
PHGDH-223	ENST00000641597	IGHV1-69D	A0A0B4J2H0	117 aa		12.81	□□□□□ -0.36
PHGDH-223	ENST00000641597	IGHV1-69	P01742	117 aa		12.81	□□□□□ -0.36
PHGDH-223	ENST00000641597	RPL11	P62913	178 aa	Known RBP	12.81	□□□□□ -0.36
PHGDH-223	ENST00000641597	C21orf62-AS1	Q17RA5	79 aa		12.8	□□□□□ -0.36
PHGDH-223	ENST00000641597	TMEM97	Q5BJF2	176 aa		12.8	□□□□□ -0.36
PHGDH-223	ENST00000641597	C19orf54	Q5BKX5	351 aa		12.8	□□□□□ -0.36
PHGDH-223	ENST00000641597	WFDC12	Q8WWY7	111 aa		12.8	□□□□□ -0.36
PHGDH-223	ENST00000641597	CREBBP	Q92793	2442 aa		12.8	□□□□□ -0.36
PHGDH-223	ENST00000641597	RBAKDN	A6NC62	111 aa		12.8	□□□□□ -0.36
PHGDH-223	ENST00000641597		H3BUX3	64 aa		12.79	□□□□□ -0.36
PHGDH-223	ENST00000641597		K7EMI3	77 aa		12.79	□□□□□ -0.36
PHGDH-223	ENST00000641597	KLK9	Q2XQG4	91 aa		12.79	□□□□□ -0.36
PHGDH-223	ENST00000641597	TMEM95	Q3KNT9	176 aa		12.79	□□□□□ -0.36
PHGDH-223	ENST00000641597	KLK9	Q9UKQ9	250 aa		12.79	□□□□□ -0.36
PHGDH-223	ENST00000641597	C7orf71	A4D174	169 aa		12.79	□□□□□ -0.36
PHGDH-223	ENST00000641597	PRSS1	P07477	247 aa		12.79	□□□□□ -0.36
PHGDH-223	ENST00000641597	RAB9A	P51151	201 aa		12.79	□□□□□ -0.36
PHGDH-223	ENST00000641597	BOD1L2	Q8IYS8	172 aa		12.79	□□□□□ -0.36
PHGDH-223	ENST00000641597	LRRK2	Q5S007	2527 aa		12.79	□□□□□ -0.36
PHGDH-223	ENST00000641597		M0R381	172 aa		12.78	□□□□□ -0.36
PHGDH-223	ENST00000641597	SPANXN1	Q5VSR9	72 aa		12.78	□□□□□ -0.36
PHGDH-223	ENST00000641597	OR2K2	Q8NGT1	345 aa		12.78	□□□□□ -0.36
PHGDH-223	ENST00000641597	IGLV2-18	A0A075B6J9	118 aa		12.78	□□□□□ -0.36
PHGDH-223	ENST00000641597	IGHV4-30-2	A0A087WSY4	118 aa		12.78	□□□□□ -0.36

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