RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 TNFAIP6P98066 277 aaPredicted RBP9.37□□□□□ -0.91
RBFOX1-224ENST00000641259 MRPL51Q4U2R6 128 aaKnown RBP9.37□□□□□ -0.91
RBFOX1-224ENST00000641259 SLC25A48Q6ZT89 311 aaKnown RBP9.37□□□□□ -0.91
RBFOX1-224ENST00000641259 C10orf126Q8N4M7 172 aa9.37□□□□□ -0.91
RBFOX1-224ENST00000641259 MAPKAPK5-AS1Q8N8E1 139 aa9.37□□□□□ -0.91
RBFOX1-224ENST00000641259 FXYD5Q96DB9 178 aa9.37□□□□□ -0.91
RBFOX1-224ENST00000641259 FAM167A-AS1Q96KT0 104 aa9.37□□□□□ -0.91
RBFOX1-224ENST00000641259 KLF12Q9Y4X4 402 aa9.37□□□□□ -0.91
RBFOX1-224ENST00000641259 SPRY2O43597 315 aa9.36□□□□□ -0.91
RBFOX1-224ENST00000641259 KLRD1Q13241 179 aa9.36□□□□□ -0.91
RBFOX1-224ENST00000641259 CSMD1Q96PZ7 3565 aa9.36□□□□□ -0.91
RBFOX1-224ENST00000641259 TRAV26-2A0A0B4J265 109 aa9.36□□□□□ -0.91
RBFOX1-224ENST00000641259 A6NJY4 79 aa9.36□□□□□ -0.91
RBFOX1-224ENST00000641259 SRRM4A7MD48 611 aaKnown RBP9.36□□□□□ -0.91
RBFOX1-224ENST00000641259 ZNF562Q6V9R5 426 aa9.36□□□□□ -0.91
RBFOX1-224ENST00000641259 PPP1R27Q86WC6 154 aa9.36□□□□□ -0.91
RBFOX1-224ENST00000641259 C8orf46Q8TAG6 207 aa9.36□□□□□ -0.91
RBFOX1-224ENST00000641259 CSMD2Q7Z408 3487 aa9.36□□□□□ -0.91
RBFOX1-224ENST00000641259 E7EQL1 145 aa9.36□□□□□ -0.91
RBFOX1-224ENST00000641259 RS1O15537 224 aa9.36□□□□□ -0.91
RBFOX1-224ENST00000641259 PF4V1P10720 104 aa9.36□□□□□ -0.91
RBFOX1-224ENST00000641259 PATE2Q6UY27 113 aa9.36□□□□□ -0.91
RBFOX1-224ENST00000641259 NFE4Q86UQ8 179 aa9.36□□□□□ -0.91
RBFOX1-224ENST00000641259 TMEM262E9PQX1 116 aa9.35□□□□□ -0.91
RBFOX1-224ENST00000641259 ZNF688P0C7X2 276 aa9.35□□□□□ -0.91
RBFOX1-224ENST00000641259 GATA4P43694 442 aa9.35□□□□□ -0.91
RBFOX1-224ENST00000641259 HERVK_113P61574 105 aa9.35□□□□□ -0.91
RBFOX1-224ENST00000641259 FAM90A1Q86YD7 464 aa9.35□□□□□ -0.91
RBFOX1-224ENST00000641259 MRPL36Q9P0J6 103 aaKnown RBP9.35□□□□□ -0.91
RBFOX1-224ENST00000641259 IGKV2-40A0A087WW87 121 aaPredicted RBP9.35□□□□□ -0.91
RBFOX1-224ENST00000641259 E9PLD3 99 aa9.35□□□□□ -0.91
RBFOX1-224ENST00000641259 IGKV2D-40P01614 121 aaPredicted RBP9.35□□□□□ -0.91
RBFOX1-224ENST00000641259 P0C879 139 aa9.35□□□□□ -0.91
RBFOX1-224ENST00000641259 RNASE2P10153 161 aaKnown RBP9.35□□□□□ -0.91
RBFOX1-224ENST00000641259 HES1Q14469 280 aa9.35□□□□□ -0.91
RBFOX1-224ENST00000641259 LYRM7Q5U5X0 104 aa9.35□□□□□ -0.91
RBFOX1-224ENST00000641259 Q86TA4 180 aa9.35□□□□□ -0.91
RBFOX1-224ENST00000641259 NTN5Q8WTR8 489 aaPredicted RBP9.35□□□□□ -0.91
RBFOX1-224ENST00000641259 RASL11BQ9BPW5 248 aa9.35□□□□□ -0.91
RBFOX1-224ENST00000641259 TRAV4A0A0B4J268 109 aa9.35□□□□□ -0.91
RBFOX1-224ENST00000641259 FCN3O75636 299 aa9.35□□□□□ -0.91
RBFOX1-224ENST00000641259 PRCDQ00LT1 54 aa9.35□□□□□ -0.91
RBFOX1-224ENST00000641259 ZNF56Q15929 161 aa9.35□□□□□ -0.91
RBFOX1-224ENST00000641259 ZNF714Q96N38 554 aa9.35□□□□□ -0.91
RBFOX1-224ENST00000641259 UTP20O75691 2785 aaKnown RBP9.35□□□□□ -0.91
RBFOX1-224ENST00000641259 TET2Q6N021 2002 aaPredicted RBP9.34□□□□□ -0.91
RBFOX1-224ENST00000641259 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.34□□□□□ -0.91
RBFOX1-224ENST00000641259 C15orf65H3BRN8 121 aa9.34□□□□□ -0.91
RBFOX1-224ENST00000641259 ANKRD29Q8N6D5 301 aa9.34□□□□□ -0.91
RBFOX1-224ENST00000641259 MRPL20Q9BYC9 149 aaKnown RBP9.34□□□□□ -0.91
RBFOX1-224ENST00000641259 UPK2O00526 184 aa9.34□□□□□ -0.91
RBFOX1-224ENST00000641259 IGHV3-23P01764 117 aa9.34□□□□□ -0.91
RBFOX1-224ENST00000641259 MGPP08493 103 aa9.34□□□□□ -0.91
RBFOX1-224ENST00000641259 KIR2DS2P43631 304 aa9.34□□□□□ -0.91
RBFOX1-224ENST00000641259 NPC2P61916 151 aa9.34□□□□□ -0.91
RBFOX1-224ENST00000641259 Q6AWC8 147 aa9.34□□□□□ -0.91
RBFOX1-224ENST00000641259 KLHL30-AS1Q8NEE0 82 aa9.34□□□□□ -0.91
RBFOX1-224ENST00000641259 PPDPFQ9H3Y8 114 aa9.34□□□□□ -0.91
RBFOX1-224ENST00000641259 RAB9BQ9NP90 201 aa9.34□□□□□ -0.91
RBFOX1-224ENST00000641259 TMEM170BQ5T4T1 132 aa9.34□□□□□ -0.91
RBFOX1-224ENST00000641259 C15orf53Q8NAA6 179 aa9.34□□□□□ -0.91
RBFOX1-224ENST00000641259 ZFHX3Q15911 3703 aa9.34□□□□□ -0.92
RBFOX1-224ENST00000641259 TRAV12-3A0A0B4J271 114 aa9.33□□□□□ -0.92
RBFOX1-224ENST00000641259 C17orf100A8MU93 164 aa9.33□□□□□ -0.92
RBFOX1-224ENST00000641259 CDIP1Q9H305 208 aa9.33□□□□□ -0.92
RBFOX1-224ENST00000641259 NDUFV3P56181 108 aaKnown RBP9.33□□□□□ -0.92
RBFOX1-224ENST00000641259 FAM216BQ8N7L0 139 aa9.33□□□□□ -0.92
RBFOX1-224ENST00000641259 TM2D2Q9BX73 214 aa9.33□□□□□ -0.92
RBFOX1-224ENST00000641259 TRAV8-4A0A0B4J246 113 aa9.33□□□□□ -0.92
RBFOX1-224ENST00000641259 FABP5P3A8MUU1 101 aa9.33□□□□□ -0.92
RBFOX1-224ENST00000641259 E7EUB6 86 aa9.33□□□□□ -0.92
RBFOX1-224ENST00000641259 GAS8-AS1O95177 125 aa9.33□□□□□ -0.92
RBFOX1-224ENST00000641259 DLX1P56177 255 aa9.33□□□□□ -0.92
RBFOX1-224ENST00000641259 SPANXN1Q5VSR9 72 aa9.33□□□□□ -0.92
RBFOX1-224ENST00000641259 FAM104BQ5XKR9 115 aa9.33□□□□□ -0.92
RBFOX1-224ENST00000641259 CHCHD5Q9BSY4 110 aa9.33□□□□□ -0.92
RBFOX1-224ENST00000641259 NACAE9PAV3 2078 aa9.32□□□□□ -0.92
RBFOX1-224ENST00000641259 IGHV3-49A0A0A0MS15 119 aa9.32□□□□□ -0.92
RBFOX1-224ENST00000641259 IGHV3-66A0A0C4DH42 116 aa9.32□□□□□ -0.92
RBFOX1-224ENST00000641259 HAX1O00165 279 aa9.32□□□□□ -0.92
RBFOX1-224ENST00000641259 Q6ZQT7 251 aa9.32□□□□□ -0.92
RBFOX1-224ENST00000641259 C1orf229Q6ZS94 237 aaPredicted RBP9.32□□□□□ -0.92
RBFOX1-224ENST00000641259 GAFA1Q96PS6 74 aa9.32□□□□□ -0.92
RBFOX1-224ENST00000641259 SCGB3A1Q96QR1 104 aa9.32□□□□□ -0.92
RBFOX1-224ENST00000641259 RNF7Q9UBF6 113 aa9.32□□□□□ -0.92
RBFOX1-224ENST00000641259 ANKHD1Q8IWZ3 2542 aaKnown RBP9.32□□□□□ -0.92
RBFOX1-224ENST00000641259 PRSS46E5RG02 174 aa9.32□□□□□ -0.92
RBFOX1-224ENST00000641259 SLC25A16P16260 332 aa9.32□□□□□ -0.92
RBFOX1-224ENST00000641259 ODF1Q14990 250 aa9.32□□□□□ -0.92
RBFOX1-224ENST00000641259 FBXL19-AS1Q494R0 122 aa9.32□□□□□ -0.92
RBFOX1-224ENST00000641259 TMEM14BQ9NUH8 114 aa9.32□□□□□ -0.92
RBFOX1-224ENST00000641259 FOXA2Q9Y261 457 aaPredicted RBP9.32□□□□□ -0.92
RBFOX1-224ENST00000641259 CCL3L1P16619 93 aa9.31□□□□□ -0.92
RBFOX1-224ENST00000641259 EIF4EBP1Q13541 118 aaPredicted RBP9.31□□□□□ -0.92
RBFOX1-224ENST00000641259 TMEM78Q5T7P6 136 aa9.31□□□□□ -0.92
RBFOX1-224ENST00000641259 TRPT1Q86TN4 253 aaKnown RBP9.31□□□□□ -0.92
RBFOX1-224ENST00000641259 OR4C13Q8NGP0 309 aa9.31□□□□□ -0.92
RBFOX1-224ENST00000641259 RNASE6Q93091 150 aaKnown RBP9.31□□□□□ -0.92
RBFOX1-224ENST00000641259 TRAV2A0A0B4J234 112 aa9.31□□□□□ -0.92
RBFOX1-224ENST00000641259 TMEM133Q9H2Q1 129 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms