RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 SGK494Q96LW2 274 aa6.65□□□□□ -1.34
SCARB2-225ENST00000640900 CSTL1Q9H114 145 aa6.65□□□□□ -1.34
SCARB2-225ENST00000640900 PARLQ9H300 379 aa6.65□□□□□ -1.34
SCARB2-225ENST00000640900 FBN3Q75N90 2809 aa6.65□□□□□ -1.35
SCARB2-225ENST00000640900 COL7A1Q02388 2944 aa6.64□□□□□ -1.35
SCARB2-225ENST00000640900 TMEM218A2RU14 115 aa6.64□□□□□ -1.35
SCARB2-225ENST00000640900 M0R2Z0 102 aa6.64□□□□□ -1.35
SCARB2-225ENST00000640900 FRMD6-AS1P0C7T7 363 aa6.64□□□□□ -1.35
SCARB2-225ENST00000640900 RBMY1A1P0DJD3 496 aaKnown RBP6.64□□□□□ -1.35
SCARB2-225ENST00000640900 RBMY1CP0DJD4 496 aa6.64□□□□□ -1.35
SCARB2-225ENST00000640900 TSPOP30536 169 aa6.64□□□□□ -1.35
SCARB2-225ENST00000640900 LEPP41159 167 aa6.64□□□□□ -1.35
SCARB2-225ENST00000640900 CDKN1BP46527 198 aa6.64□□□□□ -1.35
SCARB2-225ENST00000640900 RBMY1FQ15415 496 aaKnown RBP6.64□□□□□ -1.35
SCARB2-225ENST00000640900 ZNF674Q2M3X9 581 aa6.64□□□□□ -1.35
SCARB2-225ENST00000640900 CENPWQ5EE01 88 aa6.64□□□□□ -1.35
SCARB2-225ENST00000640900 GFI1BQ5VTD9 330 aa6.64□□□□□ -1.35
SCARB2-225ENST00000640900 PRNTQ86SH4 94 aa6.64□□□□□ -1.35
SCARB2-225ENST00000640900 ZNF575Q86XF7 245 aa6.64□□□□□ -1.35
SCARB2-225ENST00000640900 OR4B1Q8NGF8 309 aa6.64□□□□□ -1.35
SCARB2-225ENST00000640900 C20orf144Q9BQM9 153 aa6.64□□□□□ -1.35
SCARB2-225ENST00000640900 LINC00467Q9BRT7 94 aa6.64□□□□□ -1.35
SCARB2-225ENST00000640900 TUBA4BQ9H853 241 aa6.64□□□□□ -1.35
SCARB2-225ENST00000640900 RPH3ALQ9UNE2 315 aa6.64□□□□□ -1.35
SCARB2-225ENST00000640900 EIF4EBP3O60516 100 aaPredicted RBP6.63□□□□□ -1.35
SCARB2-225ENST00000640900 IGKV3-20P01619 116 aa6.63□□□□□ -1.35
SCARB2-225ENST00000640900 RPL35AP18077 110 aaKnown RBP6.63□□□□□ -1.35
SCARB2-225ENST00000640900 ADCYAP1P18509 176 aa6.63□□□□□ -1.35
SCARB2-225ENST00000640900 ZNF80P51504 273 aaPredicted RBP6.63□□□□□ -1.35
SCARB2-225ENST00000640900 APOC4P55056 127 aa6.63□□□□□ -1.35
SCARB2-225ENST00000640900 NUTF2P61970 127 aaKnown RBP6.63□□□□□ -1.35
SCARB2-225ENST00000640900 NDUFA5Q16718 116 aa6.63□□□□□ -1.35
SCARB2-225ENST00000640900 SPINK13Q1W4C9 94 aa6.63□□□□□ -1.35
SCARB2-225ENST00000640900 SOHLH1Q5JUK2 328 aa6.63□□□□□ -1.35
SCARB2-225ENST00000640900 ZNF705AQ6ZN79 300 aaPredicted RBP6.63□□□□□ -1.35
SCARB2-225ENST00000640900 Q6ZWC4 215 aa6.63□□□□□ -1.35
SCARB2-225ENST00000640900 BAGE2Q86Y30 109 aa6.63□□□□□ -1.35
SCARB2-225ENST00000640900 C1orf158Q8N1D5 194 aa6.63□□□□□ -1.35
SCARB2-225ENST00000640900 OCC1Q8TAD7 63 aa6.63□□□□□ -1.35
SCARB2-225ENST00000640900 ZC2HC1AQ96GY0 325 aa6.63□□□□□ -1.35
SCARB2-225ENST00000640900 C8orf49Q96NF6 230 aa6.63□□□□□ -1.35
SCARB2-225ENST00000640900 ASCL2Q99929 193 aa6.63□□□□□ -1.35
SCARB2-225ENST00000640900 TREM1Q9NP99 234 aa6.63□□□□□ -1.35
SCARB2-225ENST00000640900 TENM3Q9P273 2699 aa6.63□□□□□ -1.35
SCARB2-225ENST00000640900 C7orf71A4D174 169 aa6.62□□□□□ -1.35
SCARB2-225ENST00000640900 K7EN84 100 aa6.62□□□□□ -1.35
SCARB2-225ENST00000640900 GCGP01275 180 aa6.62□□□□□ -1.35
SCARB2-225ENST00000640900 SFTA3P0C7M3 94 aa6.62□□□□□ -1.35
SCARB2-225ENST00000640900 UBE2G1P62253 170 aa6.62□□□□□ -1.35
SCARB2-225ENST00000640900 TDRG1Q3Y452 100 aa6.62□□□□□ -1.35
SCARB2-225ENST00000640900 SMUG1Q53HV7 270 aa6.62□□□□□ -1.35
SCARB2-225ENST00000640900 LINC01551Q86U37 167 aa6.62□□□□□ -1.35
SCARB2-225ENST00000640900 SMIM7Q9BQ49 75 aa6.62□□□□□ -1.35
SCARB2-225ENST00000640900 TM2D3Q9BRN9 247 aa6.62□□□□□ -1.35
SCARB2-225ENST00000640900 C1QTNF4Q9BXJ3 329 aa6.62□□□□□ -1.35
SCARB2-225ENST00000640900 MRPL18Q9H0U6 180 aaKnown RBP6.62□□□□□ -1.35
SCARB2-225ENST00000640900 TP53TG1Q9Y2A0 90 aa6.62□□□□□ -1.35
SCARB2-225ENST00000640900 C19orf71A6NCJ1 209 aa6.61□□□□□ -1.35
SCARB2-225ENST00000640900 ZNF727A8MUV8 499 aa6.61□□□□□ -1.35
SCARB2-225ENST00000640900 CA1P00915 261 aaPredicted RBP6.61□□□□□ -1.35
SCARB2-225ENST00000640900 GPX1P07203 203 aa6.61□□□□□ -1.35
SCARB2-225ENST00000640900 PFN1P07737 140 aaKnown RBP6.61□□□□□ -1.35
SCARB2-225ENST00000640900 GNG4P50150 75 aa6.61□□□□□ -1.35
SCARB2-225ENST00000640900 BTN1A1Q13410 526 aa6.61□□□□□ -1.35
SCARB2-225ENST00000640900 TMEM241Q24JQ0 296 aa6.61□□□□□ -1.35
SCARB2-225ENST00000640900 Q6ZQT7 251 aa6.61□□□□□ -1.35
SCARB2-225ENST00000640900 SBSPONQ8IVN8 264 aa6.61□□□□□ -1.35
SCARB2-225ENST00000640900 SLC7A5P1Q8MH63 180 aa6.61□□□□□ -1.35
SCARB2-225ENST00000640900 RNF183Q96D59 192 aa6.61□□□□□ -1.35
SCARB2-225ENST00000640900 NEU1Q99519 415 aa6.61□□□□□ -1.35
SCARB2-225ENST00000640900 NDFIP1Q9BT67 221 aa6.61□□□□□ -1.35
SCARB2-225ENST00000640900 SEC11CQ9BY50 192 aa6.61□□□□□ -1.35
SCARB2-225ENST00000640900 SDF2L1Q9HCN8 221 aa6.61□□□□□ -1.35
SCARB2-225ENST00000640900 C11orf21Q9P2W6 132 aa6.61□□□□□ -1.35
SCARB2-225ENST00000640900 XCL2Q9UBD3 114 aa6.61□□□□□ -1.35
SCARB2-225ENST00000640900 NAT8Q9UHE5 227 aa6.61□□□□□ -1.35
SCARB2-225ENST00000640900 TP53TG3Q9ULZ0 132 aa6.61□□□□□ -1.35
SCARB2-225ENST00000640900 CARHSP1Q9Y2V2 147 aaKnown RBP6.61□□□□□ -1.35
SCARB2-225ENST00000640900 TRAV12-2A0A075B6T6 113 aa6.6□□□□□ -1.35
SCARB2-225ENST00000640900 TRAV21A0A0B4J279 112 aa6.6□□□□□ -1.35
SCARB2-225ENST00000640900 PGPEP1LA6NFU8 196 aa6.6□□□□□ -1.35
SCARB2-225ENST00000640900 FABP5P3A8MUU1 101 aa6.6□□□□□ -1.35
SCARB2-225ENST00000640900 INSP01308 110 aa6.6□□□□□ -1.35
SCARB2-225ENST00000640900 RNASE4P34096 147 aaKnown RBP6.6□□□□□ -1.35
SCARB2-225ENST00000640900 FXYD7P58549 80 aa6.6□□□□□ -1.35
SCARB2-225ENST00000640900 RPL23P62829 140 aaKnown RBP6.6□□□□□ -1.35
SCARB2-225ENST00000640900 DNLZQ5SXM8 178 aa6.6□□□□□ -1.35
SCARB2-225ENST00000640900 FAM231DQ6ZW35 169 aa6.6□□□□□ -1.35
SCARB2-225ENST00000640900 TMEM256Q8N2U0 113 aa6.6□□□□□ -1.35
SCARB2-225ENST00000640900 B9D2Q9BPU9 175 aa6.6□□□□□ -1.35
SCARB2-225ENST00000640900 OVOL2Q9BRP0 275 aa6.6□□□□□ -1.35
SCARB2-225ENST00000640900 X6R8D5 127 aa6.6□□□□□ -1.35
SCARB2-225ENST00000640900 TRAV12-3A0A0B4J271 114 aa6.59□□□□□ -1.35
SCARB2-225ENST00000640900 IGKV3D-20A0A0C4DH25 116 aa6.59□□□□□ -1.35
SCARB2-225ENST00000640900 H7BYZ3 331 aa6.59□□□□□ -1.35
SCARB2-225ENST00000640900 SH2D1AO60880 128 aa6.59□□□□□ -1.35
SCARB2-225ENST00000640900 DEFA6Q01524 100 aa6.59□□□□□ -1.35
SCARB2-225ENST00000640900 FAM162BQ5T6X4 162 aa6.59□□□□□ -1.35
SCARB2-225ENST00000640900 NHLRC2Q8NBF2 726 aa6.59□□□□□ -1.35
SCARB2-225ENST00000640900 MRAPQ8TCY5 172 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms