RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 SAV1Q9H4B6 383 aaPredicted RBP11.46□□□□□ -0.57
CLN6-219ENST00000637329 ZNF256Q9Y2P7 627 aaPredicted RBP11.46□□□□□ -0.57
CLN6-219ENST00000637329 SMIM27A0A1W2PRY6 76 aa11.45□□□□□ -0.58
CLN6-219ENST00000637329 PRB4P10163 310 aaPredicted RBP11.45□□□□□ -0.58
CLN6-219ENST00000637329 CMC4P56277 68 aaPredicted RBP11.45□□□□□ -0.58
CLN6-219ENST00000637329 LINC00322Q6ZN03 302 aaPredicted RBP11.45□□□□□ -0.58
CLN6-219ENST00000637329 TSKUQ8WUA8 353 aa11.45□□□□□ -0.58
CLN6-219ENST00000637329 ASCL2Q99929 193 aa11.45□□□□□ -0.58
CLN6-219ENST00000637329 GFRA4Q9GZZ7 299 aa11.45□□□□□ -0.58
CLN6-219ENST00000637329 A8MWL6 223 aa11.44□□□□□ -0.58
CLN6-219ENST00000637329 F6UB75 175 aa11.44□□□□□ -0.58
CLN6-219ENST00000637329 SH2D1AO60880 128 aa11.44□□□□□ -0.58
CLN6-219ENST00000637329 RPL19P84098 196 aaKnown RBP11.44□□□□□ -0.58
CLN6-219ENST00000637329 FAM110AQ9BQ89 295 aa11.44□□□□□ -0.58
CLN6-219ENST00000637329 MAP6D1Q9H9H5 199 aa11.44□□□□□ -0.58
CLN6-219ENST00000637329 A0A1W2PPQ1 181 aa11.43□□□□□ -0.58
CLN6-219ENST00000637329 XKRY2A2RUG3 117 aa11.43□□□□□ -0.58
CLN6-219ENST00000637329 A8MTW9 85 aa11.43□□□□□ -0.58
CLN6-219ENST00000637329 FABP5P3A8MUU1 101 aa11.43□□□□□ -0.58
CLN6-219ENST00000637329 ZNF705DP0CH99 300 aaPredicted RBP11.43□□□□□ -0.58
CLN6-219ENST00000637329 ZNF705BP0CI00 300 aaPredicted RBP11.43□□□□□ -0.58
CLN6-219ENST00000637329 HLA-DRB4P13762 266 aa11.43□□□□□ -0.58
CLN6-219ENST00000637329 RAB5AP20339 215 aa11.43□□□□□ -0.58
CLN6-219ENST00000637329 LEPP41159 167 aa11.43□□□□□ -0.58
CLN6-219ENST00000637329 CRIP1P50238 77 aa11.43□□□□□ -0.58
CLN6-219ENST00000637329 RPS20P60866 119 aaKnown RBP11.43□□□□□ -0.58
CLN6-219ENST00000637329 C9orf66Q5T8R8 295 aa11.43□□□□□ -0.58
CLN6-219ENST00000637329 Q6AWC8 147 aa11.43□□□□□ -0.58
CLN6-219ENST00000637329 ZFAND2AQ8N6M9 145 aa11.43□□□□□ -0.58
CLN6-219ENST00000637329 MCRIP2Q9BUT9 160 aaKnown RBP11.43□□□□□ -0.58
CLN6-219ENST00000637329 NAT8BQ9UHF3 227 aa11.43□□□□□ -0.58
CLN6-219ENST00000637329 HLA-DRB4X5D2U9 266 aa11.43□□□□□ -0.58
CLN6-219ENST00000637329 TGIF2-C20orf24A0A0A6YYL0 155 aa11.42□□□□□ -0.58
CLN6-219ENST00000637329 TYMSP04818 313 aa11.42□□□□□ -0.58
CLN6-219ENST00000637329 CXCL1P09341 107 aa11.42□□□□□ -0.58
CLN6-219ENST00000637329 DEFB131AP59861 70 aa11.42□□□□□ -0.58
CLN6-219ENST00000637329 C3orf56Q8N813 242 aa11.42□□□□□ -0.58
CLN6-219ENST00000637329 OR2D3Q8NGH3 330 aa11.42□□□□□ -0.58
CLN6-219ENST00000637329 FAM210BQ96KR6 192 aa11.42□□□□□ -0.58
CLN6-219ENST00000637329 CLUHP3Q96NS8 147 aa11.42□□□□□ -0.58
CLN6-219ENST00000637329 IZUMO1RA6ND01 250 aa11.41□□□□□ -0.58
CLN6-219ENST00000637329 KLLNB2CW77 178 aa11.41□□□□□ -0.58
CLN6-219ENST00000637329 TSPOP30536 169 aa11.41□□□□□ -0.58
CLN6-219ENST00000637329 ZNF80P51504 273 aaPredicted RBP11.41□□□□□ -0.58
CLN6-219ENST00000637329 DEFB1P60022 68 aa11.41□□□□□ -0.58
CLN6-219ENST00000637329 ODF3L2Q3SX64 289 aa11.41□□□□□ -0.58
CLN6-219ENST00000637329 LINC01559Q495D7 138 aa11.41□□□□□ -0.58
CLN6-219ENST00000637329 GDF5OSQ5U4N7 250 aa11.41□□□□□ -0.58
CLN6-219ENST00000637329 SHISA2Q6UWI4 295 aa11.41□□□□□ -0.58
CLN6-219ENST00000637329 TENM1Q9UKZ4 2725 aa11.41□□□□□ -0.58
CLN6-219ENST00000637329 TRAV21A0A0B4J279 112 aa11.4□□□□□ -0.58
CLN6-219ENST00000637329 TMEM189A5PLL7 270 aa11.4□□□□□ -0.58
CLN6-219ENST00000637329 OR11H12B2RN74 326 aa11.4□□□□□ -0.58
CLN6-219ENST00000637329 CA1P00915 261 aaPredicted RBP11.4□□□□□ -0.58
CLN6-219ENST00000637329 FAM3BP58499 235 aaPredicted RBP11.4□□□□□ -0.58
CLN6-219ENST00000637329 BEAN1Q3B7T3 259 aa11.4□□□□□ -0.58
CLN6-219ENST00000637329 NEU1Q99519 415 aa11.4□□□□□ -0.58
CLN6-219ENST00000637329 HIGD1CA8MV81 97 aa11.39□□□□□ -0.59
CLN6-219ENST00000637329 GPX1P07203 203 aa11.39□□□□□ -0.59
CLN6-219ENST00000637329 COX19Q49B96 90 aa11.39□□□□□ -0.59
CLN6-219ENST00000637329 RASL11AQ6T310 242 aa11.39□□□□□ -0.59
CLN6-219ENST00000637329 ATP5L2Q7Z4Y8 100 aa11.39□□□□□ -0.59
CLN6-219ENST00000637329 SRD5A3Q9H8P0 318 aa11.39□□□□□ -0.59
CLN6-219ENST00000637329 H3BMM0 161 aa11.38□□□□□ -0.59
CLN6-219ENST00000637329 CD33P20138 364 aa11.38□□□□□ -0.59
CLN6-219ENST00000637329 FOXA3P55318 350 aaPredicted RBP11.38□□□□□ -0.59
CLN6-219ENST00000637329 TCL1AP56279 114 aa11.38□□□□□ -0.59
CLN6-219ENST00000637329 PRR9Q5T870 116 aa11.38□□□□□ -0.59
CLN6-219ENST00000637329 AMTNQ6UX39 209 aa11.38□□□□□ -0.59
CLN6-219ENST00000637329 WFDC9Q8NEX5 89 aa11.38□□□□□ -0.59
CLN6-219ENST00000637329 CDKN1BP46527 198 aa11.37□□□□□ -0.59
CLN6-219ENST00000637329 ACTL10Q5JWF8 245 aa11.37□□□□□ -0.59
CLN6-219ENST00000637329 NUP35Q8NFH5 326 aa11.37□□□□□ -0.59
CLN6-219ENST00000637329 GTSF1Q8WW33 167 aa11.37□□□□□ -0.59
CLN6-219ENST00000637329 C7orf71A4D174 169 aa11.36□□□□□ -0.59
CLN6-219ENST00000637329 KNCNA6PVL3 124 aa11.36□□□□□ -0.59
CLN6-219ENST00000637329 ORM1P02763 201 aa11.36□□□□□ -0.59
CLN6-219ENST00000637329 CTRLP40313 264 aa11.36□□□□□ -0.59
CLN6-219ENST00000637329 RPS10P46783 165 aaKnown RBP11.36□□□□□ -0.59
CLN6-219ENST00000637329 DEFA6Q01524 100 aa11.36□□□□□ -0.59
CLN6-219ENST00000637329 MGAM2Q2M2H8 2515 aa11.36□□□□□ -0.59
CLN6-219ENST00000637329 AMBPP02760 352 aa11.35□□□□□ -0.59
CLN6-219ENST00000637329 MT-ND6P03923 174 aa11.35□□□□□ -0.59
CLN6-219ENST00000637329 WDR73Q6P4I2 378 aa11.35□□□□□ -0.59
CLN6-219ENST00000637329 A0A1B0GW15 77 aa11.34□□□□□ -0.59
CLN6-219ENST00000637329 C1orf196B1AJZ1 125 aa11.34□□□□□ -0.59
CLN6-219ENST00000637329 IGLC6P0CF74 106 aa11.34□□□□□ -0.59
CLN6-219ENST00000637329 RNASE4P34096 147 aaKnown RBP11.34□□□□□ -0.59
CLN6-219ENST00000637329 GFI1BQ5VTD9 330 aa11.34□□□□□ -0.59
CLN6-219ENST00000637329 STHQ8IWL8 128 aa11.34□□□□□ -0.59
CLN6-219ENST00000637329 BORCS7Q96B45 105 aa11.34□□□□□ -0.59
CLN6-219ENST00000637329 GNB1LQ9BYB4 327 aa11.34□□□□□ -0.59
CLN6-219ENST00000637329 C11orf21Q9P2W6 132 aa11.34□□□□□ -0.59
CLN6-219ENST00000637329 WNK1Q9H4A3 2382 aa11.33□□□□□ -0.6
CLN6-219ENST00000637329 IGKV3D-20A0A0C4DH25 116 aa11.33□□□□□ -0.6
CLN6-219ENST00000637329 A0A1B0GXF2 115 aa11.33□□□□□ -0.6
CLN6-219ENST00000637329 GZMBP10144 247 aa11.33□□□□□ -0.6
CLN6-219ENST00000637329 RAB5BP61020 215 aa11.33□□□□□ -0.6
CLN6-219ENST00000637329 HBBP68871 147 aa11.33□□□□□ -0.6
CLN6-219ENST00000637329 SPINK13Q1W4C9 94 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms