RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 ZNF524Q96C55 264 aa2.09□□□□□ -2.07
VIM-210ENST00000637053 LINC01600Q96MT4 127 aa2.09□□□□□ -2.07
VIM-210ENST00000637053 ODF3Q96PU9 254 aa2.09□□□□□ -2.07
VIM-210ENST00000637053 DSCAML1Q8TD84 2053 aa2.09□□□□□ -2.07
VIM-210ENST00000637053 TIAM1Q13009 1591 aa2.09□□□□□ -2.08
VIM-210ENST00000637053 PLXNA4Q9HCM2 1894 aa2.09□□□□□ -2.08
VIM-210ENST00000637053 RAI1Q7Z5J4 1906 aaPredicted RBP2.09□□□□□ -2.08
VIM-210ENST00000637053 CRB1P82279 1406 aa2.08□□□□□ -2.08
VIM-210ENST00000637053 COL18A1P39060 1754 aa2.08□□□□□ -2.08
VIM-210ENST00000637053 ABCC1P33527 1531 aa2.08□□□□□ -2.08
VIM-210ENST00000637053 GLI2P10070 1586 aa2.08□□□□□ -2.08
VIM-210ENST00000637053 LAMC3Q9Y6N6 1575 aa2.08□□□□□ -2.08
VIM-210ENST00000637053 IGLV1-50A0A075B6I6 118 aa2.08□□□□□ -2.08
VIM-210ENST00000637053 IGHV3-21A0A0B4J1V1 117 aa2.08□□□□□ -2.08
VIM-210ENST00000637053 IGHV1-24A0A0C4DH33 117 aa2.08□□□□□ -2.08
VIM-210ENST00000637053 IGHV3-66A0A0C4DH42 116 aa2.08□□□□□ -2.08
VIM-210ENST00000637053 FAM72CH0Y354 149 aa2.08□□□□□ -2.08
VIM-210ENST00000637053 K7ERS5 55 aa2.08□□□□□ -2.08
VIM-210ENST00000637053 IGLV3-25P01717 112 aa2.08□□□□□ -2.08
VIM-210ENST00000637053 ASAH2BP0C7U1 165 aa2.08□□□□□ -2.08
VIM-210ENST00000637053 PTHLHP12272 177 aa2.08□□□□□ -2.08
VIM-210ENST00000637053 UBE2G1P62253 170 aa2.08□□□□□ -2.08
VIM-210ENST00000637053 Q1T7F1 81 aa2.08□□□□□ -2.08
VIM-210ENST00000637053 C9orf57Q5W0N0 161 aa2.08□□□□□ -2.08
VIM-210ENST00000637053 FAM72DQ6L9T8 149 aa2.08□□□□□ -2.08
VIM-210ENST00000637053 C16orf47Q6ZP98 133 aaPredicted RBP2.08□□□□□ -2.08
VIM-210ENST00000637053 ADM2Q7Z4H4 148 aa2.08□□□□□ -2.08
VIM-210ENST00000637053 CAMK2N1Q7Z7J9 78 aa2.08□□□□□ -2.08
VIM-210ENST00000637053 CNEP1R1Q8N9A8 125 aa2.08□□□□□ -2.08
VIM-210ENST00000637053 TVP23CQ96ET8 276 aa2.08□□□□□ -2.08
VIM-210ENST00000637053 C1orf147Q96MC9 270 aaPredicted RBP2.08□□□□□ -2.08
VIM-210ENST00000637053 HIGD1BQ9P298 99 aa2.08□□□□□ -2.08
VIM-210ENST00000637053 LINC00474Q9P2X8 69 aa2.08□□□□□ -2.08
VIM-210ENST00000637053 ITSN2Q9NZM3 1697 aa2.08□□□□□ -2.08
VIM-210ENST00000637053 PEAK1Q9H792 1746 aa2.08□□□□□ -2.08
VIM-210ENST00000637053 PIK3C2BO00750 1634 aa2.07□□□□□ -2.08
VIM-210ENST00000637053 IGLV3-12A0A075B6K2 115 aa2.07□□□□□ -2.08
VIM-210ENST00000637053 IGKV1D-17A0A075B6S4 117 aa2.07□□□□□ -2.08
VIM-210ENST00000637053 IGHV3-49A0A0A0MS15 119 aa2.07□□□□□ -2.08
VIM-210ENST00000637053 IGKV6D-41A0A0C4DH26 115 aa2.07□□□□□ -2.08
VIM-210ENST00000637053 SNRPGP15A8MWD9 76 aa2.07□□□□□ -2.08
VIM-210ENST00000637053 SOCS3O14543 225 aa2.07□□□□□ -2.08
VIM-210ENST00000637053 IGHV1-69P01742 117 aa2.07□□□□□ -2.08
VIM-210ENST00000637053 SLC25A16P16260 332 aa2.07□□□□□ -2.08
VIM-210ENST00000637053 SNRPFP62306 86 aaKnown RBP2.07□□□□□ -2.08
VIM-210ENST00000637053 SUPT4H1P63272 117 aaKnown RBP2.07□□□□□ -2.08
VIM-210ENST00000637053 RHOHQ15669 191 aa2.07□□□□□ -2.08
VIM-210ENST00000637053 PYDC2Q56P42 97 aa2.07□□□□□ -2.08
VIM-210ENST00000637053 S100A7L2Q5SY68 101 aa2.07□□□□□ -2.08
VIM-210ENST00000637053 RPL7L1Q6DKI1 246 aaKnown RBP2.07□□□□□ -2.08
VIM-210ENST00000637053 Q6P435 159 aa2.07□□□□□ -2.08
VIM-210ENST00000637053 TMEM256Q8N2U0 113 aa2.07□□□□□ -2.08
VIM-210ENST00000637053 Q8NBF4 154 aa2.07□□□□□ -2.08
VIM-210ENST00000637053 RETNLBQ9BQ08 111 aa2.07□□□□□ -2.08
VIM-210ENST00000637053 CHCHD7Q9BUK0 85 aa2.07□□□□□ -2.08
VIM-210ENST00000637053 SCRT1Q9BWW7 348 aa2.07□□□□□ -2.08
VIM-210ENST00000637053 CST11Q9H112 138 aa2.07□□□□□ -2.08
VIM-210ENST00000637053 CYSTM1Q9H1C7 97 aa2.07□□□□□ -2.08
VIM-210ENST00000637053 SCRT2Q9NQ03 307 aa2.07□□□□□ -2.08
VIM-210ENST00000637053 MRPL35Q9NZE8 188 aaKnown RBP2.07□□□□□ -2.08
VIM-210ENST00000637053 RGPD4Q7Z3J3 1758 aa2.07□□□□□ -2.08
VIM-210ENST00000637053 SNRNP200O75643 2136 aaKnown RBP2.06□□□□□ -2.08
VIM-210ENST00000637053 MAST2Q6P0Q8 1798 aa2.06□□□□□ -2.08
VIM-210ENST00000637053 OBSL1O75147 1896 aa2.06□□□□□ -2.08
VIM-210ENST00000637053 FXYD6-FXYD2A0A087WZ82 144 aa2.06□□□□□ -2.08
VIM-210ENST00000637053 PIGBOS1A0A0B4J2F0 54 aa2.06□□□□□ -2.08
VIM-210ENST00000637053 IGHV5-51A0A0C4DH38 117 aa2.06□□□□□ -2.08
VIM-210ENST00000637053 IGHV5-10-1A0A0J9YXX1 117 aa2.06□□□□□ -2.08
VIM-210ENST00000637053 A6NED7 52 aa2.06□□□□□ -2.08
VIM-210ENST00000637053 C17orf51A8MQB3 221 aa2.06□□□□□ -2.08
VIM-210ENST00000637053 A8MWP4 228 aa2.06□□□□□ -2.08
VIM-210ENST00000637053 F2Z2F3 143 aa2.06□□□□□ -2.08
VIM-210ENST00000637053 GNRH2O43555 120 aa2.06□□□□□ -2.08
VIM-210ENST00000637053 NDUFC1O43677 76 aa2.06□□□□□ -2.08
VIM-210ENST00000637053 SLC25A20O43772 301 aa2.06□□□□□ -2.08
VIM-210ENST00000637053 SERF1AO75920 110 aa2.06□□□□□ -2.08
VIM-210ENST00000637053 NPYP01303 97 aa2.06□□□□□ -2.08
VIM-210ENST00000637053 ACYP1P07311 99 aa2.06□□□□□ -2.08
VIM-210ENST00000637053 CXCL8P10145 99 aa2.06□□□□□ -2.08
VIM-210ENST00000637053 EFNA4P52798 201 aa2.06□□□□□ -2.08
VIM-210ENST00000637053 IL17AQ16552 155 aa2.06□□□□□ -2.08
VIM-210ENST00000637053 MIAQ16674 131 aa2.06□□□□□ -2.08
VIM-210ENST00000637053 SPANXN1Q5VSR9 72 aa2.06□□□□□ -2.08
VIM-210ENST00000637053 C19orf48Q6RUI8 117 aa2.06□□□□□ -2.08
VIM-210ENST00000637053 C2orf91Q6ZV80 131 aa2.06□□□□□ -2.08
VIM-210ENST00000637053 LINC00269Q8N2A0 174 aa2.06□□□□□ -2.08
VIM-210ENST00000637053 SLC50A1Q9BRV3 221 aa2.06□□□□□ -2.08
VIM-210ENST00000637053 FXYD6Q9H0Q3 95 aa2.06□□□□□ -2.08
VIM-210ENST00000637053 GABARAPL1Q9H0R8 117 aa2.06□□□□□ -2.08
VIM-210ENST00000637053 TICRRQ7Z2Z1 1910 aa2.06□□□□□ -2.08
VIM-210ENST00000637053 ANAPC1Q9H1A4 1944 aa2.06□□□□□ -2.08
VIM-210ENST00000637053 DSCAMO60469 2012 aa2.06□□□□□ -2.08
VIM-210ENST00000637053 MEGF6O75095 1541 aa2.06□□□□□ -2.08
VIM-210ENST00000637053 HMGXB3Q12766 1538 aa2.06□□□□□ -2.08
VIM-210ENST00000637053 MAP3K4Q9Y6R4 1608 aa2.06□□□□□ -2.08
VIM-210ENST00000637053 NOTCH2Q04721 2471 aa2.06□□□□□ -2.08
VIM-210ENST00000637053 TOPAZ1Q8N9V7 1692 aa2.06□□□□□ -2.08
VIM-210ENST00000637053 COL24A1Q17RW2 1714 aa2.05□□□□□ -2.08
VIM-210ENST00000637053 ARHGEF28Q8N1W1 1705 aaKnown RBP2.05□□□□□ -2.08
VIM-210ENST00000637053 NUP98P52948 1817 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms