RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-223ENST00000636306 LINC00311Q8N616 119 aa8.43□□□□□ -1.06
CHD2-223ENST00000636306 CCL17Q92583 94 aa8.43□□□□□ -1.06
CHD2-223ENST00000636306 TRGV9Q99603 122 aa8.43□□□□□ -1.06
CHD2-223ENST00000636306 TMEM14CQ9P0S9 112 aa8.43□□□□□ -1.06
CHD2-223ENST00000636306 SIGLEC9Q9Y336 463 aa8.43□□□□□ -1.06
CHD2-223ENST00000636306 LOC107984156A0A0G2JMH3 177 aa8.42□□□□□ -1.06
CHD2-223ENST00000636306 SMIM9A6NGZ8 99 aa8.42□□□□□ -1.06
CHD2-223ENST00000636306 ARL17AQ8IVW1 177 aa8.42□□□□□ -1.06
CHD2-223ENST00000636306 OR11H6Q8NGC7 330 aa8.42□□□□□ -1.06
CHD2-223ENST00000636306 PKD1L2Q7Z442 2459 aa8.42□□□□□ -1.06
CHD2-223ENST00000636306 ZGRF1Q86YA3 2104 aa8.42□□□□□ -1.06
CHD2-223ENST00000636306 DIDO1Q9BTC0 2240 aaKnown RBP8.41□□□□□ -1.06
CHD2-223ENST00000636306 TRAV8-2A0A0B4J237 113 aa8.41□□□□□ -1.06
CHD2-223ENST00000636306 SCGB2A1O75556 95 aa8.41□□□□□ -1.06
CHD2-223ENST00000636306 FXYD7P58549 80 aa8.41□□□□□ -1.06
CHD2-223ENST00000636306 DUX4L9Q6RFH8 374 aaPredicted RBP8.41□□□□□ -1.06
CHD2-223ENST00000636306 OR4C13Q8NGP0 309 aa8.41□□□□□ -1.06
CHD2-223ENST00000636306 LEAP2Q969E1 77 aa8.41□□□□□ -1.06
CHD2-223ENST00000636306 TMEM160Q9NX00 188 aa8.41□□□□□ -1.06
CHD2-223ENST00000636306 PRR14LQ5THK1 2151 aa8.41□□□□□ -1.06
CHD2-223ENST00000636306 A0A1B0GX51 115 aa8.4□□□□□ -1.06
CHD2-223ENST00000636306 TCL1BO95988 128 aa8.4□□□□□ -1.06
CHD2-223ENST00000636306 LYZL1Q6UWQ5 148 aa8.4□□□□□ -1.06
CHD2-223ENST00000636306 ZFP2Q6ZN57 461 aa8.4□□□□□ -1.06
CHD2-223ENST00000636306 NPIPB3Q92617 1050 aa8.4□□□□□ -1.06
CHD2-223ENST00000636306 FLYWCH2Q96CP2 140 aaKnown RBP8.4□□□□□ -1.06
CHD2-223ENST00000636306 TRAV12-1A0A0B4J245 112 aa8.4□□□□□ -1.07
CHD2-223ENST00000636306 TRAV40A0A0B4J280 105 aa8.4□□□□□ -1.07
CHD2-223ENST00000636306 ZNF672Q499Z4 452 aaPredicted RBP8.4□□□□□ -1.07
CHD2-223ENST00000636306 WFDC3Q8IUB2 231 aa8.4□□□□□ -1.07
CHD2-223ENST00000636306 Q8N8P6 123 aa8.4□□□□□ -1.07
CHD2-223ENST00000636306 MYOZ3Q8TDC0 251 aa8.4□□□□□ -1.07
CHD2-223ENST00000636306 NDUFA4L2Q9NRX3 87 aa8.4□□□□□ -1.07
CHD2-223ENST00000636306 TRAV8-4A0A0B4J246 113 aa8.39□□□□□ -1.07
CHD2-223ENST00000636306 CRLF1O75462 422 aa8.39□□□□□ -1.07
CHD2-223ENST00000636306 LGALS1P09382 135 aaKnown RBP8.39□□□□□ -1.07
CHD2-223ENST00000636306 RPL13AP40429 203 aaKnown RBP8.39□□□□□ -1.07
CHD2-223ENST00000636306 TMEM155Q4W5P6 130 aa8.39□□□□□ -1.07
CHD2-223ENST00000636306 TMEM200BQ69YZ2 307 aa8.39□□□□□ -1.07
CHD2-223ENST00000636306 GOLT1AQ6ZVE7 132 aa8.39□□□□□ -1.07
CHD2-223ENST00000636306 C15orf53Q8NAA6 179 aa8.39□□□□□ -1.07
CHD2-223ENST00000636306 MRPL35Q9NZE8 188 aaKnown RBP8.39□□□□□ -1.07
CHD2-223ENST00000636306 SLC25A20O43772 301 aa8.38□□□□□ -1.07
CHD2-223ENST00000636306 DUSP14O95147 198 aaKnown RBP8.38□□□□□ -1.07
CHD2-223ENST00000636306 LOXP28300 417 aaPredicted RBP8.38□□□□□ -1.07
CHD2-223ENST00000636306 RPS28P62857 69 aaKnown RBP8.38□□□□□ -1.07
CHD2-223ENST00000636306 HES1Q14469 280 aa8.38□□□□□ -1.07
CHD2-223ENST00000636306 LYPD1Q8N2G4 141 aa8.38□□□□□ -1.07
CHD2-223ENST00000636306 TIMD4Q96H15 378 aa8.38□□□□□ -1.07
CHD2-223ENST00000636306 APC2O95996 2303 aa8.38□□□□□ -1.07
CHD2-223ENST00000636306 CACNA1BQ00975 2339 aa8.38□□□□□ -1.07
CHD2-223ENST00000636306 CADP27708 2225 aa8.38□□□□□ -1.07
CHD2-223ENST00000636306 H7C1H1 209 aa8.38□□□□□ -1.07
CHD2-223ENST00000636306 J3KT08 172 aa8.38□□□□□ -1.07
CHD2-223ENST00000636306 PLAUP00749 431 aa8.38□□□□□ -1.07
CHD2-223ENST00000636306 CCL3L1P16619 93 aa8.38□□□□□ -1.07
CHD2-223ENST00000636306 SRSF2Q01130 221 aaKnown RBP8.38□□□□□ -1.07
CHD2-223ENST00000636306 VMA21Q3ZAQ7 101 aa8.38□□□□□ -1.07
CHD2-223ENST00000636306 ODF3Q96PU9 254 aa8.38□□□□□ -1.07
CHD2-223ENST00000636306 MRPL20Q9BYC9 149 aaKnown RBP8.38□□□□□ -1.07
CHD2-223ENST00000636306 CACNA1DQ01668 2161 aa8.38□□□□□ -1.07
CHD2-223ENST00000636306 ACACAQ13085 2346 aa8.37□□□□□ -1.07
CHD2-223ENST00000636306 TRAV8-1A0A0A6YYK1 113 aa8.37□□□□□ -1.07
CHD2-223ENST00000636306 LINC01548A6NM66 108 aa8.37□□□□□ -1.07
CHD2-223ENST00000636306 H3BVH4 76 aa8.37□□□□□ -1.07
CHD2-223ENST00000636306 CD7P09564 240 aa8.37□□□□□ -1.07
CHD2-223ENST00000636306 ORM2P19652 201 aa8.37□□□□□ -1.07
CHD2-223ENST00000636306 CRIP1P50238 77 aa8.37□□□□□ -1.07
CHD2-223ENST00000636306 C1orf229Q6ZS94 237 aaPredicted RBP8.37□□□□□ -1.07
CHD2-223ENST00000636306 COX8CQ7Z4L0 72 aa8.37□□□□□ -1.07
CHD2-223ENST00000636306 NDUFA11Q86Y39 141 aa8.37□□□□□ -1.07
CHD2-223ENST00000636306 OR13C6PQ8NH95 151 aa8.37□□□□□ -1.07
CHD2-223ENST00000636306 LINC01560Q8TB33 94 aa8.37□□□□□ -1.07
CHD2-223ENST00000636306 TPPP3Q9BW30 176 aa8.37□□□□□ -1.07
CHD2-223ENST00000636306 AAMDCQ9H7C9 122 aa8.37□□□□□ -1.07
CHD2-223ENST00000636306 CTSZQ9UBR2 303 aa8.37□□□□□ -1.07
CHD2-223ENST00000636306 DMXL1Q9Y485 3027 aa8.37□□□□□ -1.07
CHD2-223ENST00000636306 TRAV2A0A0B4J234 112 aa8.36□□□□□ -1.07
CHD2-223ENST00000636306 TRBV7-7A0A0K0K1E9 115 aa8.36□□□□□ -1.07
CHD2-223ENST00000636306 F8VRH5 84 aa8.36□□□□□ -1.07
CHD2-223ENST00000636306 SAA1P0DJI8 122 aaPredicted RBP8.36□□□□□ -1.07
CHD2-223ENST00000636306 IGHV1-8P0DP01 117 aa8.36□□□□□ -1.07
CHD2-223ENST00000636306 DLX6P56179 175 aa8.36□□□□□ -1.07
CHD2-223ENST00000636306 ADORA2A-AS1P86434 159 aa8.36□□□□□ -1.07
CHD2-223ENST00000636306 LYPD2Q6UXB3 125 aa8.36□□□□□ -1.07
CHD2-223ENST00000636306 TMEM167AQ8TBQ9 72 aa8.36□□□□□ -1.07
CHD2-223ENST00000636306 RNF185Q96GF1 192 aa8.36□□□□□ -1.07
CHD2-223ENST00000636306 PLCE1Q9P212 2302 aa8.36□□□□□ -1.07
CHD2-223ENST00000636306 AKAP13Q12802 2813 aa8.36□□□□□ -1.07
CHD2-223ENST00000636306 ANKRD11Q6UB99 2663 aaPredicted RBP8.36□□□□□ -1.07
CHD2-223ENST00000636306 SMKR1H3BMG3 65 aa8.35□□□□□ -1.07
CHD2-223ENST00000636306 TNFRSF6BO95407 300 aa8.35□□□□□ -1.07
CHD2-223ENST00000636306 PVRIGQ6DKI7 326 aa8.35□□□□□ -1.07
CHD2-223ENST00000636306 Q8N1Y9 231 aa8.35□□□□□ -1.07
CHD2-223ENST00000636306 C21orf62Q9NYP8 219 aa8.35□□□□□ -1.07
CHD2-223ENST00000636306 HIGD1AQ9Y241 93 aa8.35□□□□□ -1.07
CHD2-223ENST00000636306 TMSB15BA0A087X1C1 80 aa8.35□□□□□ -1.07
CHD2-223ENST00000636306 FAM240AA0A1B0GVK7 77 aa8.35□□□□□ -1.07
CHD2-223ENST00000636306 M0R2P5 195 aa8.35□□□□□ -1.07
CHD2-223ENST00000636306 P0DMU3 169 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms