RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 GIPP09681 153 aaPredicted RBP11.87□□□□□ -0.51
CLN6-212ENST00000636020 RNASE4P34096 147 aaKnown RBP11.87□□□□□ -0.51
CLN6-212ENST00000636020 SH2D6Q7Z4S9 175 aa11.87□□□□□ -0.51
CLN6-212ENST00000636020 TCTE3Q8IZS6 198 aa11.87□□□□□ -0.51
CLN6-212ENST00000636020 OR10G4Q8NGN3 311 aa11.87□□□□□ -0.51
CLN6-212ENST00000636020 FAM19A4Q96LR4 140 aa11.87□□□□□ -0.51
CLN6-212ENST00000636020 SLC25A31Q9H0C2 315 aa11.87□□□□□ -0.51
CLN6-212ENST00000636020 PIGBOS1A0A0B4J2F0 54 aa11.86□□□□□ -0.51
CLN6-212ENST00000636020 LOC100131303A0A0U1RQF7 123 aa11.86□□□□□ -0.51
CLN6-212ENST00000636020 SMCO3A2RU48 225 aa11.86□□□□□ -0.51
CLN6-212ENST00000636020 WRBO00258 174 aa11.86□□□□□ -0.51
CLN6-212ENST00000636020 IGHV3-30P01768 117 aa11.86□□□□□ -0.51
CLN6-212ENST00000636020 IGHV3-33P01772 117 aa11.86□□□□□ -0.51
CLN6-212ENST00000636020 IGHV3-30-3P0DP02 117 aa11.86□□□□□ -0.51
CLN6-212ENST00000636020 IGHV3-30-5P0DP03 117 aa11.86□□□□□ -0.51
CLN6-212ENST00000636020 LAGE3Q14657 143 aa11.86□□□□□ -0.51
CLN6-212ENST00000636020 SPANXN5Q5MJ07 72 aa11.86□□□□□ -0.51
CLN6-212ENST00000636020 BPIFA4PQ86YQ2 179 aa11.86□□□□□ -0.51
CLN6-212ENST00000636020 ASB13Q8WXK3 278 aa11.86□□□□□ -0.51
CLN6-212ENST00000636020 BOLA1Q9Y3E2 137 aa11.86□□□□□ -0.51
CLN6-212ENST00000636020 RBFOX3A6NFN3 312 aa11.85□□□□□ -0.51
CLN6-212ENST00000636020 H3BQ15 152 aa11.85□□□□□ -0.51
CLN6-212ENST00000636020 IGLC2P0DOY2 106 aa11.85□□□□□ -0.51
CLN6-212ENST00000636020 PPT1P50897 306 aa11.85□□□□□ -0.51
CLN6-212ENST00000636020 ERCC8Q13216 396 aa11.85□□□□□ -0.51
CLN6-212ENST00000636020 LINC00305Q7Z4B0 112 aa11.85□□□□□ -0.51
CLN6-212ENST00000636020 IGHV1OR15-1A0A075B7D0 117 aa11.84□□□□□ -0.51
CLN6-212ENST00000636020 TRAV8-6A0A0B4J262 113 aa11.84□□□□□ -0.51
CLN6-212ENST00000636020 C5orf51A6NDU8 294 aa11.84□□□□□ -0.51
CLN6-212ENST00000636020 G3V3Q6 166 aa11.84□□□□□ -0.51
CLN6-212ENST00000636020 RGS13O14921 159 aa11.84□□□□□ -0.51
CLN6-212ENST00000636020 SYNGR2O43760 224 aa11.84□□□□□ -0.51
CLN6-212ENST00000636020 IL15RAQ13261 267 aa11.84□□□□□ -0.51
CLN6-212ENST00000636020 C9orf47Q6ZRZ4 202 aa11.84□□□□□ -0.51
CLN6-212ENST00000636020 OR10P1Q8NGE3 313 aa11.84□□□□□ -0.51
CLN6-212ENST00000636020 TMEM37Q8WXS4 190 aa11.84□□□□□ -0.51
CLN6-212ENST00000636020 C2orf50Q96LR7 162 aa11.84□□□□□ -0.51
CLN6-212ENST00000636020 KRTAP9-2Q9BYQ4 174 aa11.84□□□□□ -0.51
CLN6-212ENST00000636020 NMES1Q9C002 83 aa11.84□□□□□ -0.51
CLN6-212ENST00000636020 FAM25EA8MYX2 175 aa11.83□□□□□ -0.52
CLN6-212ENST00000636020 K7EPK0 472 aa11.83□□□□□ -0.52
CLN6-212ENST00000636020 SLC25A6P12236 298 aa11.83□□□□□ -0.52
CLN6-212ENST00000636020 OPCMLQ14982 345 aa11.83□□□□□ -0.52
CLN6-212ENST00000636020 IAH1Q2TAA2 248 aaPredicted RBP11.83□□□□□ -0.52
CLN6-212ENST00000636020 Q6ZQT7 251 aa11.83□□□□□ -0.52
CLN6-212ENST00000636020 Q6ZRU5 148 aa11.83□□□□□ -0.52
CLN6-212ENST00000636020 BAALCQ8WXS3 180 aa11.83□□□□□ -0.52
CLN6-212ENST00000636020 ARPC5LQ9BPX5 153 aa11.83□□□□□ -0.52
CLN6-212ENST00000636020 STRAPQ9Y3F4 350 aaKnown RBP11.83□□□□□ -0.52
CLN6-212ENST00000636020 H3BP45 60 aa11.82□□□□□ -0.52
CLN6-212ENST00000636020 GPX1P07203 203 aa11.82□□□□□ -0.52
CLN6-212ENST00000636020 CRISP2P16562 243 aa11.82□□□□□ -0.52
CLN6-212ENST00000636020 OR10J3Q5JRS4 329 aa11.82□□□□□ -0.52
CLN6-212ENST00000636020 PXDC1Q5TGL8 231 aa11.82□□□□□ -0.52
CLN6-212ENST00000636020 NHLRC2Q8NBF2 726 aa11.82□□□□□ -0.52
CLN6-212ENST00000636020 RASL10AQ92737 203 aa11.82□□□□□ -0.52
CLN6-212ENST00000636020 LINC00477Q96M19 166 aa11.82□□□□□ -0.52
CLN6-212ENST00000636020 AGPAT4-IT1Q9H0P7 198 aa11.82□□□□□ -0.52
CLN6-212ENST00000636020 SMLR1H3BR10 107 aa11.81□□□□□ -0.52
CLN6-212ENST00000636020 CYCSP99999 105 aaKnown RBP11.81□□□□□ -0.52
CLN6-212ENST00000636020 OR2T35Q8NGX2 323 aa11.81□□□□□ -0.52
CLN6-212ENST00000636020 GAS8-AS1O95177 125 aa11.8□□□□□ -0.52
CLN6-212ENST00000636020 NMBP08949 121 aa11.8□□□□□ -0.52
CLN6-212ENST00000636020 Q5BKY6 102 aa11.8□□□□□ -0.52
CLN6-212ENST00000636020 PRR9Q5T870 116 aa11.8□□□□□ -0.52
CLN6-212ENST00000636020 ZFAND2AQ8N6M9 145 aa11.8□□□□□ -0.52
CLN6-212ENST00000636020 PPP1R1CQ8WVI7 109 aa11.8□□□□□ -0.52
CLN6-212ENST00000636020 MRPL53Q96EL3 112 aaKnown RBP11.8□□□□□ -0.52
CLN6-212ENST00000636020 TRAV8-3A0A0A6YYJ7 113 aa11.79□□□□□ -0.52
CLN6-212ENST00000636020 RNF222A6NCQ9 220 aa11.79□□□□□ -0.52
CLN6-212ENST00000636020 M0R3E3 92 aa11.79□□□□□ -0.52
CLN6-212ENST00000636020 SLC38A11Q08AI6 406 aa11.79□□□□□ -0.52
CLN6-212ENST00000636020 GUK1Q16774 197 aa11.79□□□□□ -0.52
CLN6-212ENST00000636020 Q8N976 141 aa11.79□□□□□ -0.52
CLN6-212ENST00000636020 PAXXQ9BUH6 204 aa11.79□□□□□ -0.52
CLN6-212ENST00000636020 NPVFQ9HCQ7 196 aa11.79□□□□□ -0.52
CLN6-212ENST00000636020 GSKIPQ9P0R6 139 aa11.79□□□□□ -0.52
CLN6-212ENST00000636020 TRAV4A0A0B4J268 109 aa11.78□□□□□ -0.52
CLN6-212ENST00000636020 MPC2O95563 127 aa11.78□□□□□ -0.52
CLN6-212ENST00000636020 RAB32Q13637 225 aa11.78□□□□□ -0.52
CLN6-212ENST00000636020 H0YIZ8 118 aa11.77□□□□□ -0.53
CLN6-212ENST00000636020 ZNF253O75346 499 aa11.77□□□□□ -0.53
CLN6-212ENST00000636020 MBPP02686 304 aaPredicted RBP11.77□□□□□ -0.53
CLN6-212ENST00000636020 PFN1P07737 140 aaKnown RBP11.77□□□□□ -0.53
CLN6-212ENST00000636020 ZFP69Q49AA0 526 aa11.77□□□□□ -0.53
CLN6-212ENST00000636020 LRRC37A5PQ49AS3 106 aa11.77□□□□□ -0.53
CLN6-212ENST00000636020 LELP1Q5T871 98 aa11.77□□□□□ -0.53
CLN6-212ENST00000636020 Q8N3U1 123 aa11.77□□□□□ -0.53
CLN6-212ENST00000636020 OR11H4Q8NGC9 324 aa11.77□□□□□ -0.53
CLN6-212ENST00000636020 COX7A2P2O60397 106 aa11.76□□□□□ -0.53
CLN6-212ENST00000636020 SCGB1D2O95969 90 aa11.76□□□□□ -0.53
CLN6-212ENST00000636020 ID3Q02535 119 aa11.76□□□□□ -0.53
CLN6-212ENST00000636020 SPXQ9BT56 116 aa11.76□□□□□ -0.53
CLN6-212ENST00000636020 C11orf1Q9H5F2 150 aa11.76□□□□□ -0.53
CLN6-212ENST00000636020 FNDC10F2Z333 226 aa11.75□□□□□ -0.53
CLN6-212ENST00000636020 GATA1P15976 413 aaPredicted RBP11.75□□□□□ -0.53
CLN6-212ENST00000636020 S100A10P60903 97 aa11.75□□□□□ -0.53
CLN6-212ENST00000636020 ZNF546Q86UE3 836 aa11.75□□□□□ -0.53
CLN6-212ENST00000636020 OR4C5Q8NGB2 326 aa11.75□□□□□ -0.53
CLN6-212ENST00000636020 ATP6V0E2Q8NHE4 81 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms