RNA–Protein interactions for RNA: ENST00000635325.1

UBASH3A-209, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

TSL 1 (best)

Gene UBASH3A, Length 2,095 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-209ENST00000635325 HIST2H2BCQ6DN03 193 aa9.52□□□□□ -0.88
UBASH3A-209ENST00000635325 ZNF493Q6ZR52 646 aa9.52□□□□□ -0.88
UBASH3A-209ENST00000635325 MAPK1IP1LQ8NDC0 245 aa9.52□□□□□ -0.88
UBASH3A-209ENST00000635325 AGPAT4-IT1Q9H0P7 198 aa9.52□□□□□ -0.88
UBASH3A-209ENST00000635325 ABCA12Q86UK0 2595 aa9.52□□□□□ -0.88
UBASH3A-209ENST00000635325 A0A096LNT2 108 aa9.52□□□□□ -0.89
UBASH3A-209ENST00000635325 RBAKDNA6NC62 111 aa9.52□□□□□ -0.89
UBASH3A-209ENST00000635325 ORM1P02763 201 aa9.52□□□□□ -0.89
UBASH3A-209ENST00000635325 IGLC6P0CF74 106 aa9.52□□□□□ -0.89
UBASH3A-209ENST00000635325 PF4V1P10720 104 aa9.52□□□□□ -0.89
UBASH3A-209ENST00000635325 GLMPQ8WWB7 406 aa9.52□□□□□ -0.89
UBASH3A-209ENST00000635325 MIEN1Q9BRT3 115 aa9.52□□□□□ -0.89
UBASH3A-209ENST00000635325 TMEM95Q3KNT9 176 aa9.51□□□□□ -0.89
UBASH3A-209ENST00000635325 SPATA45Q537H7 98 aa9.51□□□□□ -0.89
UBASH3A-209ENST00000635325 ZNF705AQ6ZN79 300 aaPredicted RBP9.51□□□□□ -0.89
UBASH3A-209ENST00000635325 AMN1Q8IY45 258 aa9.51□□□□□ -0.89
UBASH3A-209ENST00000635325 FER1L6-AS1Q8NA97 138 aa9.51□□□□□ -0.89
UBASH3A-209ENST00000635325 FABP5P3A8MUU1 101 aa9.51□□□□□ -0.89
UBASH3A-209ENST00000635325 BRI3O95415 125 aa9.51□□□□□ -0.89
UBASH3A-209ENST00000635325 GPHB5Q86YW7 130 aa9.51□□□□□ -0.89
UBASH3A-209ENST00000635325 D6R8Y8 96 aa9.5□□□□□ -0.89
UBASH3A-209ENST00000635325 IGHV4-59P01825 116 aa9.5□□□□□ -0.89
UBASH3A-209ENST00000635325 PPBPP02775 128 aa9.5□□□□□ -0.89
UBASH3A-209ENST00000635325 RPS20P60866 119 aaKnown RBP9.5□□□□□ -0.89
UBASH3A-209ENST00000635325 SRSF2Q01130 221 aaKnown RBP9.5□□□□□ -0.89
UBASH3A-209ENST00000635325 FAM104BQ5XKR9 115 aa9.5□□□□□ -0.89
UBASH3A-209ENST00000635325 USMG5Q96IX5 58 aa9.5□□□□□ -0.89
UBASH3A-209ENST00000635325 C20orf173Q96LM9 149 aa9.5□□□□□ -0.89
UBASH3A-209ENST00000635325 MSRB1Q9NZV6 116 aa9.5□□□□□ -0.89
UBASH3A-209ENST00000635325 C11orf21Q9P2W6 132 aa9.5□□□□□ -0.89
UBASH3A-209ENST00000635325 H3BUA1 57 aa9.49□□□□□ -0.89
UBASH3A-209ENST00000635325 NDUFA4O00483 81 aa9.49□□□□□ -0.89
UBASH3A-209ENST00000635325 IGLV1-40P01703 118 aa9.49□□□□□ -0.89
UBASH3A-209ENST00000635325 TWIST1Q15672 202 aa9.49□□□□□ -0.89
UBASH3A-209ENST00000635325 DEFB112Q30KQ8 113 aa9.49□□□□□ -0.89
UBASH3A-209ENST00000635325 Q6ZQT7 251 aa9.49□□□□□ -0.89
UBASH3A-209ENST00000635325 OR4X2Q8NGF9 303 aa9.49□□□□□ -0.89
UBASH3A-209ENST00000635325 RNASE8Q8TDE3 154 aaKnown RBP9.49□□□□□ -0.89
UBASH3A-209ENST00000635325 C16orf92Q96LL3 132 aa9.49□□□□□ -0.89
UBASH3A-209ENST00000635325 NAV2Q8IVL1 2488 aa9.49□□□□□ -0.89
UBASH3A-209ENST00000635325 GATA3P23771 443 aa9.49□□□□□ -0.89
UBASH3A-209ENST00000635325 CFHR3Q02985 330 aa9.49□□□□□ -0.89
UBASH3A-209ENST00000635325 FAM106AQ4KMX7 169 aa9.49□□□□□ -0.89
UBASH3A-209ENST00000635325 Q5PR19 223 aa9.49□□□□□ -0.89
UBASH3A-209ENST00000635325 PRSS57Q6UWY2 283 aa9.49□□□□□ -0.89
UBASH3A-209ENST00000635325 LINC01356Q8N9X3 169 aa9.49□□□□□ -0.89
UBASH3A-209ENST00000635325 MRPL53Q96EL3 112 aaKnown RBP9.49□□□□□ -0.89
UBASH3A-209ENST00000635325 TMEM70Q9BUB7 260 aa9.49□□□□□ -0.89
UBASH3A-209ENST00000635325 SELENOKQ9Y6D0 94 aa9.49□□□□□ -0.89
UBASH3A-209ENST00000635325 U3KQK5 164 aa9.49□□□□□ -0.89
UBASH3A-209ENST00000635325 IGKV3D-20A0A0C4DH25 116 aa9.48□□□□□ -0.89
UBASH3A-209ENST00000635325 K7EP13 123 aa9.48□□□□□ -0.89
UBASH3A-209ENST00000635325 TCF21O43680 179 aa9.48□□□□□ -0.89
UBASH3A-209ENST00000635325 LEPROTL1O95214 131 aa9.48□□□□□ -0.89
UBASH3A-209ENST00000635325 LOXL1Q08397 574 aaPredicted RBP9.48□□□□□ -0.89
UBASH3A-209ENST00000635325 LINC01559Q495D7 138 aa9.48□□□□□ -0.89
UBASH3A-209ENST00000635325 MRPL51Q4U2R6 128 aaKnown RBP9.48□□□□□ -0.89
UBASH3A-209ENST00000635325 TMEM78Q5T7P6 136 aa9.48□□□□□ -0.89
UBASH3A-209ENST00000635325 SMKR1H3BMG3 65 aa9.47□□□□□ -0.89
UBASH3A-209ENST00000635325 OR5AL1P0C617 328 aa9.47□□□□□ -0.89
UBASH3A-209ENST00000635325 DEFB1P60022 68 aa9.47□□□□□ -0.89
UBASH3A-209ENST00000635325 C9orf47Q6ZRZ4 202 aa9.47□□□□□ -0.89
UBASH3A-209ENST00000635325 TIMM8BQ9Y5J9 83 aaPredicted RBP9.47□□□□□ -0.89
UBASH3A-209ENST00000635325 MXRA5Q9NR99 2828 aa9.47□□□□□ -0.89
UBASH3A-209ENST00000635325 LOC389332A0A1B0GUA5 103 aa9.47□□□□□ -0.89
UBASH3A-209ENST00000635325 SYS1-DBNDD2H3BUS1 97 aa9.47□□□□□ -0.89
UBASH3A-209ENST00000635325 TGFAP01135 160 aa9.47□□□□□ -0.89
UBASH3A-209ENST00000635325 IFI27P40305 119 aaPredicted RBP9.47□□□□□ -0.89
UBASH3A-209ENST00000635325 FOXE3Q13461 319 aa9.47□□□□□ -0.89
UBASH3A-209ENST00000635325 C10orf99Q6UWK7 81 aa9.47□□□□□ -0.89
UBASH3A-209ENST00000635325 PRELID3AQ96N28 172 aa9.47□□□□□ -0.89
UBASH3A-209ENST00000635325 AP5S1Q9NUS5 200 aa9.47□□□□□ -0.89
UBASH3A-209ENST00000635325 RNF223E7ERA6 249 aa9.46□□□□□ -0.89
UBASH3A-209ENST00000635325 SOCS3O14543 225 aa9.46□□□□□ -0.89
UBASH3A-209ENST00000635325 CRXO43186 299 aaPredicted RBP9.46□□□□□ -0.89
UBASH3A-209ENST00000635325 NCR2O95944 276 aa9.46□□□□□ -0.89
UBASH3A-209ENST00000635325 IGLC3P0DOY3 106 aa9.46□□□□□ -0.89
UBASH3A-209ENST00000635325 EDN2P20800 178 aa9.46□□□□□ -0.89
UBASH3A-209ENST00000635325 TM4SF20Q53R12 229 aa9.46□□□□□ -0.89
UBASH3A-209ENST00000635325 PRR9Q5T870 116 aa9.46□□□□□ -0.89
UBASH3A-209ENST00000635325 C9orf139Q6ZV77 190 aa9.46□□□□□ -0.89
UBASH3A-209ENST00000635325 KRTAP1-3Q8IUG1 177 aa9.46□□□□□ -0.89
UBASH3A-209ENST00000635325 ORMDL3Q8N138 153 aa9.46□□□□□ -0.89
UBASH3A-209ENST00000635325 ZNF738Q8NE65 137 aa9.46□□□□□ -0.89
UBASH3A-209ENST00000635325 PRSS3P2Q8NHM4 247 aa9.46□□□□□ -0.89
UBASH3A-209ENST00000635325 MCRIP2Q9BUT9 160 aaKnown RBP9.46□□□□□ -0.89
UBASH3A-209ENST00000635325 CNFNQ9BYD5 112 aa9.46□□□□□ -0.89
UBASH3A-209ENST00000635325 NPFFR1Q9GZQ6 430 aa9.46□□□□□ -0.89
UBASH3A-209ENST00000635325 SIGLEC8Q9NYZ4 499 aa9.46□□□□□ -0.89
UBASH3A-209ENST00000635325 UNC79Q9P2D8 2635 aa9.46□□□□□ -0.9
UBASH3A-209ENST00000635325 TRAV9-2A0A087WT02 112 aa9.46□□□□□ -0.9
UBASH3A-209ENST00000635325 TMEM238C9JI98 176 aa9.46□□□□□ -0.9
UBASH3A-209ENST00000635325 ITPR2Q14571 2701 aa9.46□□□□□ -0.9
UBASH3A-209ENST00000635325 NOTCH2Q04721 2471 aa9.46□□□□□ -0.9
UBASH3A-209ENST00000635325 GAS8-AS1O95177 125 aa9.45□□□□□ -0.9
UBASH3A-209ENST00000635325 HIST1H1AQ02539 215 aaPredicted RBP9.45□□□□□ -0.9
UBASH3A-209ENST00000635325 FA2HQ7L5A8 372 aa9.45□□□□□ -0.9
UBASH3A-209ENST00000635325 KLHDC1Q8N7A1 406 aa9.45□□□□□ -0.9
UBASH3A-209ENST00000635325 IGKV3-7A0A075B6H7 116 aa9.44□□□□□ -0.9
UBASH3A-209ENST00000635325 A0A096LNJ9 63 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms