RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 TRAV1-1A0A0B4J248 108 aa2□□□□□ -2.09
CNOT1-223ENST00000628857 IGKV1-9A0A0C4DH69 117 aa2□□□□□ -2.09
CNOT1-223ENST00000628857 A0A0D9SEW6 157 aa2□□□□□ -2.09
CNOT1-223ENST00000628857 A0A0D9SFI3 127 aa2□□□□□ -2.09
CNOT1-223ENST00000628857 TIMM17BO60830 172 aa2□□□□□ -2.09
CNOT1-223ENST00000628857 SOD1P00441 154 aa2□□□□□ -2.09
CNOT1-223ENST00000628857 PRM2P04554 102 aa2□□□□□ -2.09
CNOT1-223ENST00000628857 CD7P09564 240 aa2□□□□□ -2.09
CNOT1-223ENST00000628857 MDKP21741 143 aaPredicted RBP2□□□□□ -2.09
CNOT1-223ENST00000628857 UBE2AP49459 152 aa2□□□□□ -2.09
CNOT1-223ENST00000628857 PCBD1P61457 104 aa2□□□□□ -2.09
CNOT1-223ENST00000628857 HERVK_113P61574 105 aa2□□□□□ -2.09
CNOT1-223ENST00000628857 CCL20P78556 96 aa2□□□□□ -2.09
CNOT1-223ENST00000628857 REG3AQ06141 175 aa2□□□□□ -2.09
CNOT1-223ENST00000628857 IL17AQ16552 155 aa2□□□□□ -2.09
CNOT1-223ENST00000628857 MPV17LQ2QL34 196 aa2□□□□□ -2.09
CNOT1-223ENST00000628857 LINC01554Q52M75 96 aa2□□□□□ -2.09
CNOT1-223ENST00000628857 NMSQ5H8A3 153 aa2□□□□□ -2.09
CNOT1-223ENST00000628857 ZNF678Q5SXM1 525 aa2□□□□□ -2.09
CNOT1-223ENST00000628857 C12orf73Q69YU5 71 aa2□□□□□ -2.09
CNOT1-223ENST00000628857 SCXQ7RTU7 201 aa2□□□□□ -2.09
CNOT1-223ENST00000628857 MARCH3Q86UD3 253 aa2□□□□□ -2.09
CNOT1-223ENST00000628857 C17orf82Q86X59 251 aaPredicted RBP2□□□□□ -2.09
CNOT1-223ENST00000628857 GPHB5Q86YW7 130 aa2□□□□□ -2.09
CNOT1-223ENST00000628857 SBSPONQ8IVN8 264 aa2□□□□□ -2.09
CNOT1-223ENST00000628857 OR8B3Q8NGG8 313 aa2□□□□□ -2.09
CNOT1-223ENST00000628857 WFDC5Q8TCV5 224 aa2□□□□□ -2.09
CNOT1-223ENST00000628857 TSKUQ8WUA8 353 aa2□□□□□ -2.09
CNOT1-223ENST00000628857 TVP23CQ96ET8 276 aa2□□□□□ -2.09
CNOT1-223ENST00000628857 SLC25A2Q9BXI2 301 aa2□□□□□ -2.09
CNOT1-223ENST00000628857 NPCDR1Q9BY65 106 aa2□□□□□ -2.09
CNOT1-223ENST00000628857 PARP12Q9H0J9 701 aaKnown RBP2□□□□□ -2.09
CNOT1-223ENST00000628857 DPH3P1Q9H4G8 78 aa2□□□□□ -2.09
CNOT1-223ENST00000628857 IL36BQ9NZH7 164 aa2□□□□□ -2.09
CNOT1-223ENST00000628857 ZNF492Q9P255 531 aa2□□□□□ -2.09
CNOT1-223ENST00000628857 TAC3Q9UHF0 121 aa2□□□□□ -2.09
CNOT1-223ENST00000628857 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2□□□□□ -2.09
CNOT1-223ENST00000628857 UBR1Q8IWV7 1749 aa2□□□□□ -2.09
CNOT1-223ENST00000628857 MYOM1P52179 1685 aa1.99□□□□□ -2.09
CNOT1-223ENST00000628857 PLXNA1Q9UIW2 1896 aa1.99□□□□□ -2.09
CNOT1-223ENST00000628857 SNRNP200O75643 2136 aaKnown RBP1.99□□□□□ -2.09
CNOT1-223ENST00000628857 KIAA2026Q5HYC2 2103 aa1.99□□□□□ -2.09
CNOT1-223ENST00000628857 ARFGEF1Q9Y6D6 1849 aa1.99□□□□□ -2.09
CNOT1-223ENST00000628857 IGHV1OR15-1A0A075B7D0 117 aa1.99□□□□□ -2.09
CNOT1-223ENST00000628857 MDFIC2A0A1B0GVS7 189 aa1.99□□□□□ -2.09
CNOT1-223ENST00000628857 hADV29S1A0JD25 119 aa1.99□□□□□ -2.09
CNOT1-223ENST00000628857 ZNF736B4DX44 427 aaPredicted RBP1.99□□□□□ -2.09
CNOT1-223ENST00000628857 C9JCJ5 164 aa1.99□□□□□ -2.09
CNOT1-223ENST00000628857 NUPR1O60356 82 aa1.99□□□□□ -2.09
CNOT1-223ENST00000628857 SLC25A14O95258 325 aaPredicted RBP1.99□□□□□ -2.09
CNOT1-223ENST00000628857 LTAP01374 205 aa1.99□□□□□ -2.09
CNOT1-223ENST00000628857 IGHV3-7P01780 117 aa1.99□□□□□ -2.09
CNOT1-223ENST00000628857 SMIM13P0DJ93 91 aa1.99□□□□□ -2.09
CNOT1-223ENST00000628857 IGHV3-43DP0DP04 118 aa1.99□□□□□ -2.09
CNOT1-223ENST00000628857 FUSP35637 526 aaKnown RBP eCLIP1.99□□□□□ -2.09
CNOT1-223ENST00000628857 SSR2P43308 183 aa1.99□□□□□ -2.09
CNOT1-223ENST00000628857 KRTDAPP60985 99 aa1.99□□□□□ -2.09
CNOT1-223ENST00000628857 RPL30P62888 115 aaKnown RBP1.99□□□□□ -2.09
CNOT1-223ENST00000628857 CCL8P80075 99 aa1.99□□□□□ -2.09
CNOT1-223ENST00000628857 CIRBPQ14011 172 aaKnown RBP1.99□□□□□ -2.09
CNOT1-223ENST00000628857 LINC00303Q3SY05 128 aa1.99□□□□□ -2.09
CNOT1-223ENST00000628857 FAM78AQ5JUQ0 283 aa1.99□□□□□ -2.09
CNOT1-223ENST00000628857 C5orf38Q86SI9 138 aa1.99□□□□□ -2.09
CNOT1-223ENST00000628857 TMEM61Q8N0U2 210 aa1.99□□□□□ -2.09
CNOT1-223ENST00000628857 OR5AS1Q8N127 324 aa1.99□□□□□ -2.09
CNOT1-223ENST00000628857 TMEM252Q8N6L7 170 aa1.99□□□□□ -2.09
CNOT1-223ENST00000628857 ZNF645Q8N7E2 425 aa1.99□□□□□ -2.09
CNOT1-223ENST00000628857 FGF13Q92913 245 aa1.99□□□□□ -2.09
CNOT1-223ENST00000628857 SPTSSAQ969W0 71 aa1.99□□□□□ -2.09
CNOT1-223ENST00000628857 SMIM14Q96QK8 99 aa1.99□□□□□ -2.09
CNOT1-223ENST00000628857 CST11Q9H112 138 aa1.99□□□□□ -2.09
CNOT1-223ENST00000628857 LINC00588Q9Y4M8 146 aa1.99□□□□□ -2.09
CNOT1-223ENST00000628857 TRPM2O94759 1503 aa1.99□□□□□ -2.09
CNOT1-223ENST00000628857 IQGAP1P46940 1657 aa1.99□□□□□ -2.09
CNOT1-223ENST00000628857 PLCH1Q4KWH8 1693 aa1.99□□□□□ -2.09
CNOT1-223ENST00000628857 EDC4Q6P2E9 1401 aaKnown RBP1.99□□□□□ -2.09
CNOT1-223ENST00000628857 TSC2P49815 1807 aa1.98□□□□□ -2.09
CNOT1-223ENST00000628857 NFAT5O94916 1531 aa1.98□□□□□ -2.09
CNOT1-223ENST00000628857 KCPQ6ZWJ8 1503 aa1.98□□□□□ -2.09
CNOT1-223ENST00000628857 IGHV1-45A0A0A0MS14 117 aa1.98□□□□□ -2.09
CNOT1-223ENST00000628857 A0A1B0GW54 56 aa1.98□□□□□ -2.09
CNOT1-223ENST00000628857 PANO1I0J062 215 aa1.98□□□□□ -2.09
CNOT1-223ENST00000628857 PEX7O00628 323 aa1.98□□□□□ -2.09
CNOT1-223ENST00000628857 ZNF324O75467 553 aaPredicted RBP1.98□□□□□ -2.09
CNOT1-223ENST00000628857 C1QAP02745 245 aa1.98□□□□□ -2.09
CNOT1-223ENST00000628857 PTHLHP12272 177 aa1.98□□□□□ -2.09
CNOT1-223ENST00000628857 ZNF823P16415 610 aa1.98□□□□□ -2.09
CNOT1-223ENST00000628857 COX7A1P24310 79 aa1.98□□□□□ -2.09
CNOT1-223ENST00000628857 COL8A2P25067 703 aa1.98□□□□□ -2.09
CNOT1-223ENST00000628857 MPV17P39210 176 aa1.98□□□□□ -2.09
CNOT1-223ENST00000628857 SS18Q15532 418 aa1.98□□□□□ -2.09
CNOT1-223ENST00000628857 LAIR2Q6ISS4 152 aa1.98□□□□□ -2.09
CNOT1-223ENST00000628857 TIFABQ6ZNK6 161 aa1.98□□□□□ -2.09
CNOT1-223ENST00000628857 FP248Q71RG6 208 aaPredicted RBP1.98□□□□□ -2.09
CNOT1-223ENST00000628857 SPATA12Q7Z6I5 190 aa1.98□□□□□ -2.09
CNOT1-223ENST00000628857 SERP2Q8N6R1 65 aa1.98□□□□□ -2.09
CNOT1-223ENST00000628857 SLC25A29Q8N8R3 303 aa1.98□□□□□ -2.09
CNOT1-223ENST00000628857 Q8N976 141 aa1.98□□□□□ -2.09
CNOT1-223ENST00000628857 DIRC1Q969H9 104 aa1.98□□□□□ -2.09
CNOT1-223ENST00000628857 RMI2Q96E14 147 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms