RNA–Protein interactions for RNA: ENST00000628018.2

CAPNS1-215, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-215ENST00000628018 ZFAND2AQ8N6M9 145 aa18.49■□□□□ 0.55
CAPNS1-215ENST00000628018 CXCL1P09341 107 aa18.49■□□□□ 0.55
CAPNS1-215ENST00000628018 INSL3P51460 131 aa18.49■□□□□ 0.55
CAPNS1-215ENST00000628018 ODF3L2Q3SX64 289 aa18.49■□□□□ 0.55
CAPNS1-215ENST00000628018 ODF3Q96PU9 254 aa18.49■□□□□ 0.55
CAPNS1-215ENST00000628018 TRBV24-1A0A075B6N3 115 aa18.48■□□□□ 0.55
CAPNS1-215ENST00000628018 TGIF2-C20orf24A0A0A6YYL0 155 aa18.48■□□□□ 0.55
CAPNS1-215ENST00000628018 SMIM27A0A1W2PRY6 76 aa18.48■□□□□ 0.55
CAPNS1-215ENST00000628018 FABP5P3A8MUU1 101 aa18.48■□□□□ 0.55
CAPNS1-215ENST00000628018 PRR9Q5T870 116 aa18.48■□□□□ 0.55
CAPNS1-215ENST00000628018 C9orf66Q5T8R8 295 aa18.48■□□□□ 0.55
CAPNS1-215ENST00000628018 SHISA2Q6UWI4 295 aa18.48■□□□□ 0.55
CAPNS1-215ENST00000628018 APRG1Q8IVJ8 170 aa18.48■□□□□ 0.55
CAPNS1-215ENST00000628018 PYGO2Q9BRQ0 406 aa18.48■□□□□ 0.55
CAPNS1-215ENST00000628018 BEAN1Q3B7T3 259 aa18.47■□□□□ 0.55
CAPNS1-215ENST00000628018 WFDC9Q8NEX5 89 aa18.47■□□□□ 0.55
CAPNS1-215ENST00000628018 TSKUQ8WUA8 353 aa18.47■□□□□ 0.55
CAPNS1-215ENST00000628018 KNCNA6PVL3 124 aa18.46■□□□□ 0.55
CAPNS1-215ENST00000628018 HLA-DRB4P13762 266 aa18.46■□□□□ 0.55
CAPNS1-215ENST00000628018 ZNF124Q15973 351 aa18.46■□□□□ 0.55
CAPNS1-215ENST00000628018 OR2D3Q8NGH3 330 aa18.46■□□□□ 0.55
CAPNS1-215ENST00000628018 HLA-DRB4X5D2U9 266 aa18.46■□□□□ 0.55
CAPNS1-215ENST00000628018 SORL1Q92673 2214 aa18.45■□□□□ 0.54
CAPNS1-215ENST00000628018 A0A1W2PPQ1 181 aa18.45■□□□□ 0.54
CAPNS1-215ENST00000628018 A8MTW9 85 aa18.45■□□□□ 0.54
CAPNS1-215ENST00000628018 A8MWL6 223 aa18.45■□□□□ 0.54
CAPNS1-215ENST00000628018 H3BMM0 161 aa18.44■□□□□ 0.54
CAPNS1-215ENST00000628018 CMC4P56277 68 aaPredicted RBP18.44■□□□□ 0.54
CAPNS1-215ENST00000628018 ACTL10Q5JWF8 245 aa18.44■□□□□ 0.54
CAPNS1-215ENST00000628018 VWFP04275 2813 aa18.44■□□□□ 0.54
CAPNS1-215ENST00000628018 TRAV9-1A0A075B6T8 112 aa18.44■□□□□ 0.54
CAPNS1-215ENST00000628018 KLLNB2CW77 178 aa18.44■□□□□ 0.54
CAPNS1-215ENST00000628018 GPX1P07203 203 aa18.44■□□□□ 0.54
CAPNS1-215ENST00000628018 RPL19P84098 196 aaKnown RBP18.44■□□□□ 0.54
CAPNS1-215ENST00000628018 AMTNQ6UX39 209 aa18.44■□□□□ 0.54
CAPNS1-215ENST00000628018 MCRIP2Q9BUT9 160 aaKnown RBP18.44■□□□□ 0.54
CAPNS1-215ENST00000628018 OR11H12B2RN74 326 aa18.43■□□□□ 0.54
CAPNS1-215ENST00000628018 J3KRW8 73 aa18.43■□□□□ 0.54
CAPNS1-215ENST00000628018 IGKV3-20P01619 116 aa18.43■□□□□ 0.54
CAPNS1-215ENST00000628018 RAB5AP20339 215 aa18.43■□□□□ 0.54
CAPNS1-215ENST00000628018 LEPP41159 167 aa18.43■□□□□ 0.54
CAPNS1-215ENST00000628018 TCL1AP56279 114 aa18.43■□□□□ 0.54
CAPNS1-215ENST00000628018 FAM210BQ96KR6 192 aa18.43■□□□□ 0.54
CAPNS1-215ENST00000628018 FAM110AQ9BQ89 295 aa18.43■□□□□ 0.54
CAPNS1-215ENST00000628018 GFRA4Q9GZZ7 299 aa18.43■□□□□ 0.54
CAPNS1-215ENST00000628018 TMEM189A5PLL7 270 aa18.42■□□□□ 0.54
CAPNS1-215ENST00000628018 FAM231BA6NCW3 169 aa18.42■□□□□ 0.54
CAPNS1-215ENST00000628018 KIR3DS1Q14943 382 aa18.42■□□□□ 0.54
CAPNS1-215ENST00000628018 NEU1Q99519 415 aa18.42■□□□□ 0.54
CAPNS1-215ENST00000628018 LINC01559Q495D7 138 aa18.41■□□□□ 0.54
CAPNS1-215ENST00000628018 Q6AWC8 147 aa18.41■□□□□ 0.54
CAPNS1-215ENST00000628018 GTSF1Q8WW33 167 aa18.41■□□□□ 0.54
CAPNS1-215ENST00000628018 BTF3L4Q96K17 158 aa18.41■□□□□ 0.54
CAPNS1-215ENST00000628018 NAT8BQ9UHF3 227 aa18.41■□□□□ 0.54
CAPNS1-215ENST00000628018 CD7P09564 240 aa18.4■□□□□ 0.54
CAPNS1-215ENST00000628018 RNASE4P34096 147 aaKnown RBP18.4■□□□□ 0.54
CAPNS1-215ENST00000628018 Q6ZQT7 251 aa18.4■□□□□ 0.54
CAPNS1-215ENST00000628018 ZNF575Q86XF7 245 aa18.4■□□□□ 0.54
CAPNS1-215ENST00000628018 C11orf21Q9P2W6 132 aa18.4■□□□□ 0.54
CAPNS1-215ENST00000628018 AGRNO00468 2067 aa18.4■□□□□ 0.54
CAPNS1-215ENST00000628018 TRAV21A0A0B4J279 112 aa18.39■□□□□ 0.54
CAPNS1-215ENST00000628018 HIGD1CA8MV81 97 aa18.39■□□□□ 0.54
CAPNS1-215ENST00000628018 ORM1P02763 201 aa18.39■□□□□ 0.54
CAPNS1-215ENST00000628018 GZMBP10144 247 aa18.39■□□□□ 0.54
CAPNS1-215ENST00000628018 NUP35Q8NFH5 326 aa18.39■□□□□ 0.54
CAPNS1-215ENST00000628018 C19orf73Q9NVV2 129 aa18.39■□□□□ 0.54
CAPNS1-215ENST00000628018 TYMSP04818 313 aa18.39■□□□□ 0.53
CAPNS1-215ENST00000628018 TSPOP30536 169 aa18.39■□□□□ 0.53
CAPNS1-215ENST00000628018 CDKN1BP46527 198 aa18.39■□□□□ 0.53
CAPNS1-215ENST00000628018 FOXA3P55318 350 aaPredicted RBP18.39■□□□□ 0.53
CAPNS1-215ENST00000628018 CLUHP3Q96NS8 147 aa18.39■□□□□ 0.53
CAPNS1-215ENST00000628018 IGKV3D-20A0A0C4DH25 116 aa18.38■□□□□ 0.53
CAPNS1-215ENST00000628018 XKRY2A2RUG3 117 aa18.38■□□□□ 0.53
CAPNS1-215ENST00000628018 RBMY1BA6NDE4 496 aaKnown RBP18.38■□□□□ 0.53
CAPNS1-215ENST00000628018 RBMY1EA6NEQ0 496 aaKnown RBP18.38■□□□□ 0.53
CAPNS1-215ENST00000628018 RBMY1DP0C7P1 496 aaKnown RBP18.38■□□□□ 0.53
CAPNS1-215ENST00000628018 RPS20P60866 119 aaKnown RBP18.38■□□□□ 0.53
CAPNS1-215ENST00000628018 TMSB15BA0A087X1C1 80 aa18.37■□□□□ 0.53
CAPNS1-215ENST00000628018 M0R2Z0 102 aa18.37■□□□□ 0.53
CAPNS1-215ENST00000628018 SPINK13Q1W4C9 94 aa18.37■□□□□ 0.53
CAPNS1-215ENST00000628018 C7orf71A4D174 169 aa18.36■□□□□ 0.53
CAPNS1-215ENST00000628018 WIPF1O43516 503 aa18.36■□□□□ 0.53
CAPNS1-215ENST00000628018 IGLL1P15814 213 aa18.35■□□□□ 0.53
CAPNS1-215ENST00000628018 GFI1BQ5VTD9 330 aa18.35■□□□□ 0.53
CAPNS1-215ENST00000628018 SRD5A3Q9H8P0 318 aa18.35■□□□□ 0.53
CAPNS1-215ENST00000628018 RPS10P46783 165 aaKnown RBP18.34■□□□□ 0.53
CAPNS1-215ENST00000628018 STHQ8IWL8 128 aa18.34■□□□□ 0.53
CAPNS1-215ENST00000628018 TRAV12-2A0A075B6T6 113 aa18.33■□□□□ 0.53
CAPNS1-215ENST00000628018 SPINK4O60575 86 aa18.33■□□□□ 0.53
CAPNS1-215ENST00000628018 ZNF324O75467 553 aaPredicted RBP18.33■□□□□ 0.53
CAPNS1-215ENST00000628018 TRPT1Q86TN4 253 aaKnown RBP18.33■□□□□ 0.53
CAPNS1-215ENST00000628018 PGLYRP4Q96LB8 373 aa18.33■□□□□ 0.53
CAPNS1-215ENST00000628018 STAB1Q9NY15 2570 aa18.33■□□□□ 0.52
CAPNS1-215ENST00000628018 TRAV12-3A0A0B4J271 114 aa18.33■□□□□ 0.52
CAPNS1-215ENST00000628018 CRXO43186 299 aaPredicted RBP18.32■□□□□ 0.52
CAPNS1-215ENST00000628018 IGLC6P0CF74 106 aa18.32■□□□□ 0.52
CAPNS1-215ENST00000628018 FXYD7P58549 80 aa18.32■□□□□ 0.52
CAPNS1-215ENST00000628018 WFDC10AQ9H1F0 79 aa18.32■□□□□ 0.52
CAPNS1-215ENST00000628018 GRIFINA4D1Z8 144 aa18.31■□□□□ 0.52
CAPNS1-215ENST00000628018 FRMD6-AS1P0C7T7 363 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms