RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 MAP1LC3BQ9GZQ8 125 aa0.68□□□□□ -2.3
CDKL5-207ENST00000624700 PSTPIP2Q9H939 334 aa0.68□□□□□ -2.3
CDKL5-207ENST00000624700 POPDC3Q9HBV1 291 aa0.68□□□□□ -2.3
CDKL5-207ENST00000624700 LYRM2Q9NU23 88 aaPredicted RBP0.68□□□□□ -2.3
CDKL5-207ENST00000624700 RFX7Q2KHR2 1363 aa0.68□□□□□ -2.3
CDKL5-207ENST00000624700 CADP27708 2225 aa0.68□□□□□ -2.3
CDKL5-207ENST00000624700 MAP3K4Q9Y6R4 1608 aa0.67□□□□□ -2.3
CDKL5-207ENST00000624700 BCORL1Q5H9F3 1711 aa0.67□□□□□ -2.3
CDKL5-207ENST00000624700 CEP170BQ9Y4F5 1589 aaPredicted RBP0.67□□□□□ -2.3
CDKL5-207ENST00000624700 ASXL3Q9C0F0 2248 aa0.67□□□□□ -2.3
CDKL5-207ENST00000624700 H7C1C5 153 aa0.67□□□□□ -2.3
CDKL5-207ENST00000624700 HOXA6P31267 233 aa0.67□□□□□ -2.3
CDKL5-207ENST00000624700 LCN6P62502 163 aa0.67□□□□□ -2.3
CDKL5-207ENST00000624700 AKR1C8PQ5T2L2 129 aa0.67□□□□□ -2.3
CDKL5-207ENST00000624700 LELP1Q5T871 98 aa0.67□□□□□ -2.3
CDKL5-207ENST00000624700 PATE2Q6UY27 113 aa0.67□□□□□ -2.3
CDKL5-207ENST00000624700 KRTAP19-3Q7Z4W3 81 aa0.67□□□□□ -2.3
CDKL5-207ENST00000624700 DGCR14Q96DF8 476 aaKnown RBP0.67□□□□□ -2.3
CDKL5-207ENST00000624700 HYLS1Q96M11 299 aa0.67□□□□□ -2.3
CDKL5-207ENST00000624700 ZNF714Q96N38 554 aa0.67□□□□□ -2.3
CDKL5-207ENST00000624700 MED29Q9NX70 200 aa0.67□□□□□ -2.3
CDKL5-207ENST00000624700 MGAMO43451 1857 aa0.67□□□□□ -2.3
CDKL5-207ENST00000624700 CD109Q6YHK3 1445 aa0.66□□□□□ -2.3
CDKL5-207ENST00000624700 KLF7O75840 302 aaPredicted RBP0.66□□□□□ -2.3
CDKL5-207ENST00000624700 CRHP06850 196 aa0.66□□□□□ -2.3
CDKL5-207ENST00000624700 KLRD1Q13241 179 aa0.66□□□□□ -2.3
CDKL5-207ENST00000624700 PPTC7Q8NI37 304 aa0.66□□□□□ -2.3
CDKL5-207ENST00000624700 MALSU1Q96EH3 234 aa0.66□□□□□ -2.3
CDKL5-207ENST00000624700 SH3BGRL3Q9H299 93 aa0.66□□□□□ -2.3
CDKL5-207ENST00000624700 TCEAL2Q9H3H9 227 aaPredicted RBP0.66□□□□□ -2.3
CDKL5-207ENST00000624700 PRNDQ9UKY0 176 aa0.66□□□□□ -2.3
CDKL5-207ENST00000624700 SSR3Q9UNL2 185 aa0.66□□□□□ -2.3
CDKL5-207ENST00000624700 PTPRDP23468 1912 aa0.66□□□□□ -2.3
CDKL5-207ENST00000624700 RIIAD1A6NNX1 92 aa0.65□□□□□ -2.31
CDKL5-207ENST00000624700 JMJD7-PLA2G4BH0Y9G9 81 aa0.65□□□□□ -2.31
CDKL5-207ENST00000624700 ATP5HO75947 161 aa0.65□□□□□ -2.31
CDKL5-207ENST00000624700 PHBP35232 272 aa0.65□□□□□ -2.31
CDKL5-207ENST00000624700 SPATA45Q537H7 98 aa0.65□□□□□ -2.31
CDKL5-207ENST00000624700 C1orf134Q5TEV5 83 aa0.65□□□□□ -2.31
CDKL5-207ENST00000624700 LRRC18Q8N456 261 aa0.65□□□□□ -2.31
CDKL5-207ENST00000624700 OR4K15Q8NH41 348 aa0.65□□□□□ -2.31
CDKL5-207ENST00000624700 Q8TAT8 98 aa0.65□□□□□ -2.31
CDKL5-207ENST00000624700 CHCHD1Q96BP2 118 aaKnown RBP0.65□□□□□ -2.31
CDKL5-207ENST00000624700 PBDC1Q9BVG4 233 aa0.65□□□□□ -2.31
CDKL5-207ENST00000624700 STOML2Q9UJZ1 356 aa0.65□□□□□ -2.31
CDKL5-207ENST00000624700 EIF3AQ14152 1382 aaKnown RBP0.65□□□□□ -2.31
CDKL5-207ENST00000624700 ERBINQ96RT1 1412 aa0.64□□□□□ -2.31
CDKL5-207ENST00000624700 TRGC2P03986 189 aa0.64□□□□□ -2.31
CDKL5-207ENST00000624700 OGNP20774 298 aaKnown RBP0.64□□□□□ -2.31
CDKL5-207ENST00000624700 S100A7AQ86SG5 101 aa0.64□□□□□ -2.31
CDKL5-207ENST00000624700 OR13C6PQ8NH95 151 aa0.64□□□□□ -2.31
CDKL5-207ENST00000624700 ZHX1-C8orf76Q96EF9 292 aa0.64□□□□□ -2.31
CDKL5-207ENST00000624700 GGACTQ9BVM4 153 aa0.64□□□□□ -2.31
CDKL5-207ENST00000624700 C10orf95Q9H7T3 257 aa0.64□□□□□ -2.31
CDKL5-207ENST00000624700 CACYBPQ9HB71 228 aaKnown RBP0.64□□□□□ -2.31
CDKL5-207ENST00000624700 MUC4Q99102 2169 aa0.64□□□□□ -2.31
CDKL5-207ENST00000624700 DMDP11532 3685 aa0.64□□□□□ -2.31
CDKL5-207ENST00000624700 CPS1P31327 1500 aa0.64□□□□□ -2.31
CDKL5-207ENST00000624700 FAM135BQ49AJ0 1406 aa0.64□□□□□ -2.31
CDKL5-207ENST00000624700 PAPPA2Q9BXP8 1791 aa0.63□□□□□ -2.31
CDKL5-207ENST00000624700 UNC13BO14795 1591 aa0.63□□□□□ -2.31
CDKL5-207ENST00000624700 hDV103S1A0JD37 113 aa0.63□□□□□ -2.31
CDKL5-207ENST00000624700 LYRM1O43325 122 aa0.63□□□□□ -2.31
CDKL5-207ENST00000624700 HIST1H2BKO60814 126 aa0.63□□□□□ -2.31
CDKL5-207ENST00000624700 PPYP01298 95 aa0.63□□□□□ -2.31
CDKL5-207ENST00000624700 IFNA1P01562 189 aa0.63□□□□□ -2.31
CDKL5-207ENST00000624700 IGLV1-51P01701 117 aa0.63□□□□□ -2.31
CDKL5-207ENST00000624700 HIST1H2BJP06899 126 aa0.63□□□□□ -2.31
CDKL5-207ENST00000624700 GNG5P63218 68 aa0.63□□□□□ -2.31
CDKL5-207ENST00000624700 POU6F1Q14863 301 aa0.63□□□□□ -2.31
CDKL5-207ENST00000624700 TMED4Q7Z7H5 227 aa0.63□□□□□ -2.31
CDKL5-207ENST00000624700 TET1Q8NFU7 2136 aa0.63□□□□□ -2.31
CDKL5-207ENST00000624700 ZC2HC1AQ96GY0 325 aa0.63□□□□□ -2.31
CDKL5-207ENST00000624700 RNF11Q9Y3C5 154 aa0.63□□□□□ -2.31
CDKL5-207ENST00000624700 MYH3P11055 1940 aa0.63□□□□□ -2.31
CDKL5-207ENST00000624700 SPTBN1Q01082 2364 aaKnown RBP0.63□□□□□ -2.31
CDKL5-207ENST00000624700 TULP4Q9NRJ4 1543 aa0.63□□□□□ -2.31
CDKL5-207ENST00000624700 PRKDCP78527 4128 aaKnown RBP0.62□□□□□ -2.31
CDKL5-207ENST00000624700 GRIN2AQ12879 1464 aa0.62□□□□□ -2.31
CDKL5-207ENST00000624700 B4DSR2 109 aa0.62□□□□□ -2.31
CDKL5-207ENST00000624700 RPL19P84098 196 aaKnown RBP0.62□□□□□ -2.31
CDKL5-207ENST00000624700 CIRBPQ14011 172 aaKnown RBP0.62□□□□□ -2.31
CDKL5-207ENST00000624700 SPINK9Q5DT21 86 aa0.62□□□□□ -2.31
CDKL5-207ENST00000624700 NUP35Q8NFH5 326 aa0.62□□□□□ -2.31
CDKL5-207ENST00000624700 GINS3Q9BRX5 216 aa0.62□□□□□ -2.31
CDKL5-207ENST00000624700 RTL8AQ9BWD3 113 aa0.62□□□□□ -2.31
CDKL5-207ENST00000624700 NIT2Q9NQR4 276 aa0.62□□□□□ -2.31
CDKL5-207ENST00000624700 CASZ1Q86V15 1759 aa0.62□□□□□ -2.31
CDKL5-207ENST00000624700 MYCBP2O75592 4640 aa0.61□□□□□ -2.31
CDKL5-207ENST00000624700 KIAA0100Q14667 2235 aaKnown RBP0.61□□□□□ -2.31
CDKL5-207ENST00000624700 ANKRD31Q8N7Z5 1873 aa0.61□□□□□ -2.31
CDKL5-207ENST00000624700 GPR31O00270 319 aa0.61□□□□□ -2.31
CDKL5-207ENST00000624700 FOXA3P55318 350 aaPredicted RBP0.61□□□□□ -2.31
CDKL5-207ENST00000624700 ARPP19P56211 112 aa0.61□□□□□ -2.31
CDKL5-207ENST00000624700 HACD4Q5VWC8 232 aa0.61□□□□□ -2.31
CDKL5-207ENST00000624700 LINC00299Q6ZSB3 139 aa0.61□□□□□ -2.31
CDKL5-207ENST00000624700 GPX7Q96SL4 187 aaPredicted RBP0.61□□□□□ -2.31
CDKL5-207ENST00000624700 PAIP2Q9BPZ3 127 aaKnown RBP0.61□□□□□ -2.31
CDKL5-207ENST00000624700 ABCA3Q99758 1704 aa0.61□□□□□ -2.31
CDKL5-207ENST00000624700 LRRC37A3O60309 1634 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms