RNA–Protein interactions for RNA: ENST00000622483.4

PCSK6-220, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,132 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-220ENST00000622483 FCN3O75636 299 aa16.98■□□□□ 0.31
PCSK6-220ENST00000622483 ZNF502Q8TBZ5 544 aa16.97■□□□□ 0.31
PCSK6-220ENST00000622483 ANAPC13Q9BS18 74 aa16.97■□□□□ 0.31
PCSK6-220ENST00000622483 FBXL15Q9H469 300 aa16.97■□□□□ 0.31
PCSK6-220ENST00000622483 IGKV1-17P01599 117 aa16.97■□□□□ 0.31
PCSK6-220ENST00000622483 HOXB4P17483 251 aaPredicted RBP16.96■□□□□ 0.31
PCSK6-220ENST00000622483 C3orf36Q3SXR2 165 aa16.96■□□□□ 0.31
PCSK6-220ENST00000622483 MSRB2Q9Y3D2 182 aa16.96■□□□□ 0.31
PCSK6-220ENST00000622483 LINC01549A6NIU2 74 aa16.96■□□□□ 0.31
PCSK6-220ENST00000622483 IGHV1-46P01743 117 aa16.96■□□□□ 0.31
PCSK6-220ENST00000622483 RPEQ96AT9 228 aa16.96■□□□□ 0.31
PCSK6-220ENST00000622483 Q6AWC8 147 aa16.96■□□□□ 0.31
PCSK6-220ENST00000622483 MORN3Q6PF18 240 aaPredicted RBP16.96■□□□□ 0.31
PCSK6-220ENST00000622483 GFRALQ6UXV0 394 aa16.96■□□□□ 0.31
PCSK6-220ENST00000622483 RNF185Q96GF1 192 aa16.96■□□□□ 0.31
PCSK6-220ENST00000622483 C1QTNF4Q9BXJ3 329 aa16.96■□□□□ 0.31
PCSK6-220ENST00000622483 UFC1Q9Y3C8 167 aa16.96■□□□□ 0.31
PCSK6-220ENST00000622483 IGLV1-44P01699 117 aa16.95■□□□□ 0.3
PCSK6-220ENST00000622483 IGHV3-23P01764 117 aa16.95■□□□□ 0.3
PCSK6-220ENST00000622483 HLA-DRB4P13762 266 aa16.95■□□□□ 0.3
PCSK6-220ENST00000622483 GATD1Q8NB37 220 aa16.95■□□□□ 0.3
PCSK6-220ENST00000622483 HLA-DRB4X5D2U9 266 aa16.95■□□□□ 0.3
PCSK6-220ENST00000622483 K7ENP7 123 aa16.95■□□□□ 0.3
PCSK6-220ENST00000622483 PLGLAQ15195 96 aa16.94■□□□□ 0.3
PCSK6-220ENST00000622483 ZMAT4Q9H898 229 aa16.94■□□□□ 0.3
PCSK6-220ENST00000622483 SPRY2O43597 315 aa16.94■□□□□ 0.3
PCSK6-220ENST00000622483 LYPD2Q6UXB3 125 aa16.94■□□□□ 0.3
PCSK6-220ENST00000622483 HOXA3O43365 443 aaPredicted RBP16.93■□□□□ 0.3
PCSK6-220ENST00000622483 ZNF474Q6S9Z5 364 aaPredicted RBP16.93■□□□□ 0.3
PCSK6-220ENST00000622483 CCL17Q92583 94 aa16.93■□□□□ 0.3
PCSK6-220ENST00000622483 TRBV20-1A0A075B6N2 111 aa16.92■□□□□ 0.3
PCSK6-220ENST00000622483 AAMDCQ9H7C9 122 aa16.92■□□□□ 0.3
PCSK6-220ENST00000622483 NCBP2LA6PVI3 153 aaKnown RBP16.92■□□□□ 0.3
PCSK6-220ENST00000622483 TRGV3P03979 118 aa16.92■□□□□ 0.3
PCSK6-220ENST00000622483 IGFL3Q6UXB1 125 aa16.92■□□□□ 0.3
PCSK6-220ENST00000622483 INS-IGF2F8WCM5 200 aa16.91■□□□□ 0.3
PCSK6-220ENST00000622483 CFAP126Q5VTH2 177 aa16.91■□□□□ 0.3
PCSK6-220ENST00000622483 SHANK2-AS3Q9BTD1 123 aa16.91■□□□□ 0.3
PCSK6-220ENST00000622483 SLC25A15Q9Y619 301 aa16.91■□□□□ 0.3
PCSK6-220ENST00000622483 SHISA2Q6UWI4 295 aa16.91■□□□□ 0.3
PCSK6-220ENST00000622483 CARD19Q96LW7 228 aa16.91■□□□□ 0.3
PCSK6-220ENST00000622483 ERCC8Q13216 396 aa16.9■□□□□ 0.3
PCSK6-220ENST00000622483 CNIH1O95406 144 aa16.9■□□□□ 0.3
PCSK6-220ENST00000622483 MYOZ3Q8TDC0 251 aa16.9■□□□□ 0.3
PCSK6-220ENST00000622483 RNF125Q96EQ8 232 aa16.9■□□□□ 0.3
PCSK6-220ENST00000622483 TMEM14CQ9P0S9 112 aa16.9■□□□□ 0.3
PCSK6-220ENST00000622483 USP24Q9UPU5 2620 aa16.9■□□□□ 0.3
PCSK6-220ENST00000622483 KLRD1Q13241 179 aa16.9■□□□□ 0.3
PCSK6-220ENST00000622483 DTX2Q86UW9 622 aa16.89■□□□□ 0.29
PCSK6-220ENST00000622483 VKORC1Q9BQB6 163 aa16.89■□□□□ 0.29
PCSK6-220ENST00000622483 ERG28Q9UKR5 140 aa16.89■□□□□ 0.29
PCSK6-220ENST00000622483 ARHGAP32A7KAX9 2087 aa16.89■□□□□ 0.29
PCSK6-220ENST00000622483 TSPAN13O95857 204 aa16.89■□□□□ 0.29
PCSK6-220ENST00000622483 SRSF9Q13242 221 aaKnown RBP eCLIP16.89■□□□□ 0.29
PCSK6-220ENST00000622483 SCGB1D4Q6XE38 83 aa16.89■□□□□ 0.29
PCSK6-220ENST00000622483 PRR25Q96S07 402 aa16.89■□□□□ 0.29
PCSK6-220ENST00000622483 TRBV7-3A0A075B6L6 115 aa16.88■□□□□ 0.29
PCSK6-220ENST00000622483 PRTN3P24158 256 aa16.88■□□□□ 0.29
PCSK6-220ENST00000622483 EMP1P54849 157 aa16.88■□□□□ 0.29
PCSK6-220ENST00000622483 ZNF491Q8N8L2 437 aa16.88■□□□□ 0.29
PCSK6-220ENST00000622483 LRRK2Q5S007 2527 aa16.88■□□□□ 0.29
PCSK6-220ENST00000622483 CSMD2Q7Z408 3487 aa16.88■□□□□ 0.29
PCSK6-220ENST00000622483 OR11H12B2RN74 326 aa16.87■□□□□ 0.29
PCSK6-220ENST00000622483 Q6ZQT7 251 aa16.87■□□□□ 0.29
PCSK6-220ENST00000622483 OR11H1Q8NG94 326 aa16.87■□□□□ 0.29
PCSK6-220ENST00000622483 OR11H2Q8NH07 326 aa16.87■□□□□ 0.29
PCSK6-220ENST00000622483 DLX4Q92988 240 aaPredicted RBP16.87■□□□□ 0.29
PCSK6-220ENST00000622483 SIGLEC9Q9Y336 463 aa16.87■□□□□ 0.29
PCSK6-220ENST00000622483 KLHL30-AS1Q8NEE0 82 aa16.87■□□□□ 0.29
PCSK6-220ENST00000622483 ZNF462Q96JM2 2506 aa16.87■□□□□ 0.29
PCSK6-220ENST00000622483 TEX22C9J3V5 150 aa16.86■□□□□ 0.29
PCSK6-220ENST00000622483 H3BRN7 92 aa16.86■□□□□ 0.29
PCSK6-220ENST00000622483 I3L2K1 104 aa16.86■□□□□ 0.29
PCSK6-220ENST00000622483 GLRXP35754 106 aa16.86■□□□□ 0.29
PCSK6-220ENST00000622483 PPP1R27Q86WC6 154 aa16.86■□□□□ 0.29
PCSK6-220ENST00000622483 ZNF575Q86XF7 245 aa16.86■□□□□ 0.29
PCSK6-220ENST00000622483 PLEKHB2Q96CS7 222 aa16.86■□□□□ 0.29
PCSK6-220ENST00000622483 NXT2Q9NPJ8 142 aaKnown RBP16.86■□□□□ 0.29
PCSK6-220ENST00000622483 A0A0G2JNJ9 132 aa16.85■□□□□ 0.29
PCSK6-220ENST00000622483 ATP5LO75964 103 aa16.85■□□□□ 0.29
PCSK6-220ENST00000622483 COX7A1P24310 79 aa16.85■□□□□ 0.29
PCSK6-220ENST00000622483 Q9UFV3 132 aa16.85■□□□□ 0.29
PCSK6-220ENST00000622483 IGHV3OR16-13A0A075B7E8 117 aa16.85■□□□□ 0.29
PCSK6-220ENST00000622483 IGHV3-74A0A0B4J1X5 117 aa16.85■□□□□ 0.29
PCSK6-220ENST00000622483 USP9XQ93008 2570 aaPredicted RBP16.85■□□□□ 0.29
PCSK6-220ENST00000622483 LINC00574Q9H8X3 128 aa16.85■□□□□ 0.29
PCSK6-220ENST00000622483 PIFOQ8TCI5 191 aa16.84■□□□□ 0.29
PCSK6-220ENST00000622483 MYMXA0A1B0GTQ4 84 aa16.84■□□□□ 0.29
PCSK6-220ENST00000622483 J3KRW8 73 aa16.83■□□□□ 0.29
PCSK6-220ENST00000622483 IGHV3-66A0A0C4DH42 116 aa16.83■□□□□ 0.28
PCSK6-220ENST00000622483 C5orf64Q2M2E5 130 aa16.83■□□□□ 0.28
PCSK6-220ENST00000622483 SMIM20Q8N5G0 67 aa16.83■□□□□ 0.28
PCSK6-220ENST00000622483 H7C2G1 150 aa16.83■□□□□ 0.28
PCSK6-220ENST00000622483 LGALS1P09382 135 aaKnown RBP16.83■□□□□ 0.28
PCSK6-220ENST00000622483 HERV-K104P63124 156 aa16.83■□□□□ 0.28
PCSK6-220ENST00000622483 SRSF1Q07955 248 aaKnown RBP eCLIP16.83■□□□□ 0.283e-6■□□□□ 8.3
PCSK6-220ENST00000622483 C1orf122Q6ZSJ8 110 aa16.83■□□□□ 0.28
PCSK6-220ENST00000622483 POLQO75417 2590 aa16.82■□□□□ 0.28
PCSK6-220ENST00000622483 HRNRQ86YZ3 2850 aaPredicted RBP16.82■□□□□ 0.28
PCSK6-220ENST00000622483 GRNP28799 593 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms