RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 NPC2P61916 151 aa2.1□□□□□ -2.07
BRCA1-229ENST00000621897 Q0VG73 95 aa2.1□□□□□ -2.07
BRCA1-229ENST00000621897 FUT5Q11128 374 aa2.1□□□□□ -2.07
BRCA1-229ENST00000621897 SS18Q15532 418 aa2.1□□□□□ -2.07
BRCA1-229ENST00000621897 DPPA3Q6W0C5 159 aa2.1□□□□□ -2.07
BRCA1-229ENST00000621897 ATP11AUNQ6ZP68 121 aa2.1□□□□□ -2.07
BRCA1-229ENST00000621897 AQP3Q92482 292 aa2.1□□□□□ -2.07
BRCA1-229ENST00000621897 CHCHD1Q96BP2 118 aaKnown RBP2.1□□□□□ -2.07
BRCA1-229ENST00000621897 HYLS1Q96M11 299 aa2.1□□□□□ -2.07
BRCA1-229ENST00000621897 IMMP2LQ96T52 175 aa2.1□□□□□ -2.07
BRCA1-229ENST00000621897 RNF5Q99942 180 aa2.1□□□□□ -2.07
BRCA1-229ENST00000621897 BET1LQ9NYM9 111 aa2.1□□□□□ -2.07
BRCA1-229ENST00000621897 TPRKBQ9Y3C4 175 aa2.1□□□□□ -2.07
BRCA1-229ENST00000621897 FAM215AQ9Y5M1 114 aa2.1□□□□□ -2.07
BRCA1-229ENST00000621897 GREB1Q4ZG55 1949 aa2.1□□□□□ -2.07
BRCA1-229ENST00000621897 LRRIQ1Q96JM4 1722 aa2.1□□□□□ -2.07
BRCA1-229ENST00000621897 MYO9BQ13459 2157 aa2.1□□□□□ -2.07
BRCA1-229ENST00000621897 CHD3Q12873 2000 aaKnown RBP2.1□□□□□ -2.07
BRCA1-229ENST00000621897 UACAQ9BZF9 1416 aa2.09□□□□□ -2.07
BRCA1-229ENST00000621897 POLA1P09884 1462 aaPredicted RBP2.09□□□□□ -2.07
BRCA1-229ENST00000621897 PPLO60437 1756 aa2.09□□□□□ -2.07
BRCA1-229ENST00000621897 TRBV10-2A0A0K0K1G8 114 aa2.09□□□□□ -2.07
BRCA1-229ENST00000621897 MDFIC2A0A1B0GVS7 189 aa2.09□□□□□ -2.07
BRCA1-229ENST00000621897 FAM24AA6NFZ4 105 aa2.09□□□□□ -2.07
BRCA1-229ENST00000621897 C17orf98A8MV24 154 aa2.09□□□□□ -2.07
BRCA1-229ENST00000621897 E7EQL1 145 aa2.09□□□□□ -2.07
BRCA1-229ENST00000621897 H3BQ15 152 aa2.09□□□□□ -2.07
BRCA1-229ENST00000621897 H3BQ85 93 aa2.09□□□□□ -2.07
BRCA1-229ENST00000621897 EDF1O60869 148 aaKnown RBP2.09□□□□□ -2.07
BRCA1-229ENST00000621897 CLPSP04118 112 aa2.09□□□□□ -2.07
BRCA1-229ENST00000621897 IGLV7-43P04211 117 aa2.09□□□□□ -2.07
BRCA1-229ENST00000621897 SHBGP04278 402 aa2.09□□□□□ -2.07
BRCA1-229ENST00000621897 CISD3P0C7P0 127 aa2.09□□□□□ -2.07
BRCA1-229ENST00000621897 COL8A2P25067 703 aa2.09□□□□□ -2.07
BRCA1-229ENST00000621897 FXYD2P54710 66 aa2.09□□□□□ -2.07
BRCA1-229ENST00000621897 DCDP81605 110 aaKnown RBP2.09□□□□□ -2.07
BRCA1-229ENST00000621897 ZNF117Q03924 483 aa2.09□□□□□ -2.07
BRCA1-229ENST00000621897 CIRBPQ14011 172 aaKnown RBP2.09□□□□□ -2.07
BRCA1-229ENST00000621897 SPRNQ5BIV9 151 aa2.09□□□□□ -2.07
BRCA1-229ENST00000621897 MIC13Q5XKP0 118 aa2.09□□□□□ -2.07
BRCA1-229ENST00000621897 C12orf73Q69YU5 71 aa2.09□□□□□ -2.07
BRCA1-229ENST00000621897 FP248Q71RG6 208 aaPredicted RBP2.09□□□□□ -2.07
BRCA1-229ENST00000621897 C1orf64Q8NEQ6 169 aa2.09□□□□□ -2.07
BRCA1-229ENST00000621897 ATP6V0E2Q8NHE4 81 aa2.09□□□□□ -2.07
BRCA1-229ENST00000621897 CLEC2BQ92478 149 aa2.09□□□□□ -2.07
BRCA1-229ENST00000621897 PSMF1Q92530 271 aa2.09□□□□□ -2.07
BRCA1-229ENST00000621897 RETNLBQ9BQ08 111 aa2.09□□□□□ -2.07
BRCA1-229ENST00000621897 NABP2Q9BQ15 211 aa2.09□□□□□ -2.07
BRCA1-229ENST00000621897 ATG5Q9H1Y0 275 aa2.09□□□□□ -2.07
BRCA1-229ENST00000621897 USP54Q70EL1 1684 aa2.09□□□□□ -2.08
BRCA1-229ENST00000621897 WDR90Q96KV7 1748 aa2.08□□□□□ -2.08
BRCA1-229ENST00000621897 TRPM3Q9HCF6 1732 aaPredicted RBP2.08□□□□□ -2.08
BRCA1-229ENST00000621897 ERVK-7P63135 1459 aa2.08□□□□□ -2.08
BRCA1-229ENST00000621897 CASZ1Q86V15 1759 aa2.08□□□□□ -2.08
BRCA1-229ENST00000621897 DOCK1Q14185 1865 aa2.08□□□□□ -2.08
BRCA1-229ENST00000621897 ADAMTS12P58397 1594 aa2.08□□□□□ -2.08
BRCA1-229ENST00000621897 TRAV7A0A075B6U4 112 aa2.08□□□□□ -2.08
BRCA1-229ENST00000621897 C17orf112F2Z3M2 114 aa2.08□□□□□ -2.08
BRCA1-229ENST00000621897 H3BPC8 53 aa2.08□□□□□ -2.08
BRCA1-229ENST00000621897 GNRH2O43555 120 aa2.08□□□□□ -2.08
BRCA1-229ENST00000621897 SSSCA1O60232 199 aa2.08□□□□□ -2.08
BRCA1-229ENST00000621897 NDUFB6O95139 128 aa2.08□□□□□ -2.08
BRCA1-229ENST00000621897 IGHV3-53P01767 116 aa2.08□□□□□ -2.08
BRCA1-229ENST00000621897 MT-ATP8P03928 68 aa2.08□□□□□ -2.08
BRCA1-229ENST00000621897 CKS2P33552 79 aa2.08□□□□□ -2.08
BRCA1-229ENST00000621897 IQCJQ1A5X6 159 aa2.08□□□□□ -2.08
BRCA1-229ENST00000621897 KRTAP21-2Q3LI59 83 aa2.08□□□□□ -2.08
BRCA1-229ENST00000621897 FAM229BQ4G0N7 80 aa2.08□□□□□ -2.08
BRCA1-229ENST00000621897 FAM74A1Q5RGS3 127 aa2.08□□□□□ -2.08
BRCA1-229ENST00000621897 LYZL1Q6UWQ5 148 aa2.08□□□□□ -2.08
BRCA1-229ENST00000621897 OR2T35Q8NGX2 323 aa2.08□□□□□ -2.08
BRCA1-229ENST00000621897 VSTM2AQ8TAG5 236 aa2.08□□□□□ -2.08
BRCA1-229ENST00000621897 POP5Q969H6 163 aaKnown RBP2.08□□□□□ -2.08
BRCA1-229ENST00000621897 ASF1BQ9NVP2 202 aa2.08□□□□□ -2.08
BRCA1-229ENST00000621897 MYH8P13535 1937 aa2.08□□□□□ -2.08
BRCA1-229ENST00000621897 ROBO1Q9Y6N7 1651 aa2.08□□□□□ -2.08
BRCA1-229ENST00000621897 MARF1Q9Y4F3 1742 aaKnown RBP2.08□□□□□ -2.08
BRCA1-229ENST00000621897 SMARCA4P51532 1647 aa2.07□□□□□ -2.08
BRCA1-229ENST00000621897 TOPAZ1Q8N9V7 1692 aa2.07□□□□□ -2.08
BRCA1-229ENST00000621897 MUC21A0A0G2JKD1 596 aa2.07□□□□□ -2.08
BRCA1-229ENST00000621897 J3QLW9 94 aa2.07□□□□□ -2.08
BRCA1-229ENST00000621897 IGLV1-51P01701 117 aa2.07□□□□□ -2.08
BRCA1-229ENST00000621897 RNASE2P10153 161 aaKnown RBP2.07□□□□□ -2.08
BRCA1-229ENST00000621897 COX7CP15954 63 aa2.07□□□□□ -2.08
BRCA1-229ENST00000621897 PEBP1P30086 187 aaKnown RBP2.07□□□□□ -2.08
BRCA1-229ENST00000621897 ATP5EP56381 51 aaPredicted RBP2.07□□□□□ -2.08
BRCA1-229ENST00000621897 SBSPONQ8IVN8 264 aa2.07□□□□□ -2.08
BRCA1-229ENST00000621897 TSKUQ8WUA8 353 aa2.07□□□□□ -2.08
BRCA1-229ENST00000621897 LINC00052Q96N35 136 aa2.07□□□□□ -2.08
BRCA1-229ENST00000621897 SLC50A1Q9BRV3 221 aa2.07□□□□□ -2.08
BRCA1-229ENST00000621897 NPVFQ9HCQ7 196 aa2.07□□□□□ -2.08
BRCA1-229ENST00000621897 TMEM242Q9NWH2 141 aa2.07□□□□□ -2.08
BRCA1-229ENST00000621897 TIMM9Q9Y5J7 89 aa2.07□□□□□ -2.08
BRCA1-229ENST00000621897 LY96Q9Y6Y9 160 aa2.07□□□□□ -2.08
BRCA1-229ENST00000621897 MALRD1Q5VYJ5 2156 aa2.07□□□□□ -2.08
BRCA1-229ENST00000621897 ANK1P16157 1881 aa2.07□□□□□ -2.08
BRCA1-229ENST00000621897 CASKIN1Q8WXD9 1431 aa2.07□□□□□ -2.08
BRCA1-229ENST00000621897 FANCAO15360 1455 aa2.07□□□□□ -2.08
BRCA1-229ENST00000621897 PLA2R1Q13018 1463 aa2.07□□□□□ -2.08
BRCA1-229ENST00000621897 PLEKHH2Q8IVE3 1493 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms