RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 LGALS1P09382 135 aaKnown RBP7.28□□□□□ -1.24
GGA3-223ENST00000621870 LYL1P12980 280 aa7.28□□□□□ -1.24
GGA3-223ENST00000621870 C10orf91Q5T1B1 145 aa7.28□□□□□ -1.24
GGA3-223ENST00000621870 TTC9CQ8N5M4 171 aa7.28□□□□□ -1.24
GGA3-223ENST00000621870 NUP35Q8NFH5 326 aa7.28□□□□□ -1.24
GGA3-223ENST00000621870 AJUBAQ96IF1 538 aa7.28□□□□□ -1.24
GGA3-223ENST00000621870 C11orf68Q9H3H3 251 aaKnown RBP7.28□□□□□ -1.24
GGA3-223ENST00000621870 CIDEAO60543 219 aa7.28□□□□□ -1.24
GGA3-223ENST00000621870 IFI27L1Q96BM0 104 aa7.28□□□□□ -1.24
GGA3-223ENST00000621870 ANKRD17O75179 2603 aaKnown RBP7.28□□□□□ -1.24
GGA3-223ENST00000621870 TRAV13-1A0A0B4J241 112 aa7.27□□□□□ -1.25
GGA3-223ENST00000621870 GAGE12JA6NER3 117 aa7.27□□□□□ -1.25
GGA3-223ENST00000621870 DNAL4O96015 105 aa7.27□□□□□ -1.25
GGA3-223ENST00000621870 HLA-DMBP28068 263 aa7.27□□□□□ -1.25
GGA3-223ENST00000621870 GAGE1Q13065 139 aa7.27□□□□□ -1.25
GGA3-223ENST00000621870 GAGE4Q13068 117 aa7.27□□□□□ -1.25
GGA3-223ENST00000621870 GAGE5Q13069 117 aa7.27□□□□□ -1.25
GGA3-223ENST00000621870 JOSD1Q15040 202 aaPredicted RBP7.27□□□□□ -1.25
GGA3-223ENST00000621870 GUSBP1Q15486 140 aa7.27□□□□□ -1.25
GGA3-223ENST00000621870 CD300EQ496F6 205 aaPredicted RBP7.27□□□□□ -1.25
GGA3-223ENST00000621870 GAGE13Q4V321 117 aa7.27□□□□□ -1.25
GGA3-223ENST00000621870 LSM4Q9Y4Z0 139 aaKnown RBP7.27□□□□□ -1.25
GGA3-223ENST00000621870 GGTLC3B5MD39 225 aa7.27□□□□□ -1.25
GGA3-223ENST00000621870 ERASQ7Z444 233 aa7.27□□□□□ -1.25
GGA3-223ENST00000621870 NIT1Q86X76 327 aa7.27□□□□□ -1.25
GGA3-223ENST00000621870 OR5A1Q8NGJ0 315 aa7.27□□□□□ -1.25
GGA3-223ENST00000621870 TMEM170AQ8WVE7 144 aa7.27□□□□□ -1.25
GGA3-223ENST00000621870 COPS9Q8WXC6 57 aa7.27□□□□□ -1.25
GGA3-223ENST00000621870 GNB1LQ9BYB4 327 aa7.27□□□□□ -1.25
GGA3-223ENST00000621870 NCKAP5O14513 1909 aa7.27□□□□□ -1.25
GGA3-223ENST00000621870 AMBPP02760 352 aa7.27□□□□□ -1.25
GGA3-223ENST00000621870 APOC4P55056 127 aa7.27□□□□□ -1.25
GGA3-223ENST00000621870 ATP5L2Q7Z4Y8 100 aa7.27□□□□□ -1.25
GGA3-223ENST00000621870 MS4A6AQ9H2W1 248 aa7.27□□□□□ -1.25
GGA3-223ENST00000621870 A0A1B0GUS0 222 aa7.26□□□□□ -1.25
GGA3-223ENST00000621870 COL5A1-AS1Q5SY13 56 aa7.26□□□□□ -1.25
GGA3-223ENST00000621870 Q6ZSR3 168 aa7.26□□□□□ -1.25
GGA3-223ENST00000621870 CSTL1Q9H114 145 aa7.26□□□□□ -1.25
GGA3-223ENST00000621870 IGHV1OR15-1A0A075B7D0 117 aa7.26□□□□□ -1.25
GGA3-223ENST00000621870 CXCL1P09341 107 aa7.26□□□□□ -1.25
GGA3-223ENST00000621870 SMIM12Q96EX1 92 aa7.26□□□□□ -1.25
GGA3-223ENST00000621870 C17orf77Q96MU5 243 aa7.26□□□□□ -1.25
GGA3-223ENST00000621870 C8orf49Q96NF6 230 aa7.26□□□□□ -1.25
GGA3-223ENST00000621870 PRR25Q96S07 402 aa7.26□□□□□ -1.25
GGA3-223ENST00000621870 TRBV24-1A0A075B6N3 115 aa7.26□□□□□ -1.25
GGA3-223ENST00000621870 H3BRN7 92 aa7.26□□□□□ -1.25
GGA3-223ENST00000621870 VCYO14598 125 aa7.26□□□□□ -1.25
GGA3-223ENST00000621870 PFN1P07737 140 aaKnown RBP7.26□□□□□ -1.25
GGA3-223ENST00000621870 LOXL1Q08397 574 aaPredicted RBP7.26□□□□□ -1.25
GGA3-223ENST00000621870 TRBV7-9A0A0J9YWB2 115 aa7.25□□□□□ -1.25
GGA3-223ENST00000621870 H3BUA1 57 aa7.25□□□□□ -1.25
GGA3-223ENST00000621870 IGKV1-17P01599 117 aa7.25□□□□□ -1.25
GGA3-223ENST00000621870 LYPD6Q86Y78 171 aa7.25□□□□□ -1.25
GGA3-223ENST00000621870 TANC2Q9HCD6 1990 aa7.25□□□□□ -1.25
GGA3-223ENST00000621870 CELSR3Q9NYQ7 3312 aa7.25□□□□□ -1.25
GGA3-223ENST00000621870 CFAP54Q96N23 3096 aa7.25□□□□□ -1.25
GGA3-223ENST00000621870 DSCAML1Q8TD84 2053 aa7.25□□□□□ -1.25
GGA3-223ENST00000621870 PTPRSQ13332 1948 aa7.25□□□□□ -1.25
GGA3-223ENST00000621870 FOXE3Q13461 319 aa7.25□□□□□ -1.25
GGA3-223ENST00000621870 ANXA2RQ3ZCQ2 193 aa7.25□□□□□ -1.25
GGA3-223ENST00000621870 FAM90A2PQ658T7 463 aa7.25□□□□□ -1.25
GGA3-223ENST00000621870 APRG1Q8IVJ8 170 aa7.25□□□□□ -1.25
GGA3-223ENST00000621870 C5orf56Q8N8D9 126 aa7.25□□□□□ -1.25
GGA3-223ENST00000621870 TMEM213A2RRL7 107 aa7.25□□□□□ -1.25
GGA3-223ENST00000621870 TMEM190Q8WZ59 177 aa7.25□□□□□ -1.25
GGA3-223ENST00000621870 ZMAT4Q9H898 229 aa7.25□□□□□ -1.25
GGA3-223ENST00000621870 ZNF106Q9H2Y7 1883 aaKnown RBP7.25□□□□□ -1.25
GGA3-223ENST00000621870 A0A096LPF7 62 aa7.24□□□□□ -1.25
GGA3-223ENST00000621870 INAFM1C9JVW0 142 aa7.24□□□□□ -1.25
GGA3-223ENST00000621870 K7EIM0 57 aa7.24□□□□□ -1.25
GGA3-223ENST00000621870 GP9P14770 177 aa7.24□□□□□ -1.25
GGA3-223ENST00000621870 LAGE3Q14657 143 aa7.24□□□□□ -1.25
GGA3-223ENST00000621870 SFTA2Q6UW10 78 aa7.24□□□□□ -1.25
GGA3-223ENST00000621870 HIST3H2BBQ8N257 126 aa7.24□□□□□ -1.25
GGA3-223ENST00000621870 SIRPDQ9H106 197 aa7.24□□□□□ -1.25
GGA3-223ENST00000621870 C10orf142B7Z368 130 aa7.24□□□□□ -1.25
GGA3-223ENST00000621870 SMIM13P0DJ93 91 aa7.24□□□□□ -1.25
GGA3-223ENST00000621870 FABP2P12104 132 aa7.24□□□□□ -1.25
GGA3-223ENST00000621870 AZU1P20160 251 aa7.24□□□□□ -1.25
GGA3-223ENST00000621870 CKS1BP61024 79 aa7.24□□□□□ -1.25
GGA3-223ENST00000621870 TMEM75Q8N9X5 138 aa7.24□□□□□ -1.25
GGA3-223ENST00000621870 GAGE10A6NGK3 116 aa7.24□□□□□ -1.25
GGA3-223ENST00000621870 RHODO00212 210 aa7.24□□□□□ -1.25
GGA3-223ENST00000621870 DPM2O94777 84 aa7.24□□□□□ -1.25
GGA3-223ENST00000621870 SLC25A2Q9BXI2 301 aa7.24□□□□□ -1.25
GGA3-223ENST00000621870 MRPS16Q9Y3D3 137 aaKnown RBP7.24□□□□□ -1.25
GGA3-223ENST00000621870 HIST1H2BLQ99880 126 aa7.24□□□□□ -1.25
GGA3-223ENST00000621870 LY96Q9Y6Y9 160 aa7.24□□□□□ -1.25
GGA3-223ENST00000621870 LINC00158P58513 81 aa7.23□□□□□ -1.25
GGA3-223ENST00000621870 PRR20EP86478 221 aa7.23□□□□□ -1.25
GGA3-223ENST00000621870 PRR20CP86479 221 aa7.23□□□□□ -1.25
GGA3-223ENST00000621870 PRR20DP86480 221 aa7.23□□□□□ -1.25
GGA3-223ENST00000621870 PRR20BP86481 221 aa7.23□□□□□ -1.25
GGA3-223ENST00000621870 PRR20AP86496 221 aa7.23□□□□□ -1.25
GGA3-223ENST00000621870 CDSNQ15517 529 aa7.23□□□□□ -1.25
GGA3-223ENST00000621870 C6orf226Q5I0X4 101 aa7.23□□□□□ -1.25
GGA3-223ENST00000621870 PIFOQ8TCI5 191 aa7.23□□□□□ -1.25
GGA3-223ENST00000621870 ATP6V0BQ99437 205 aa7.23□□□□□ -1.25
GGA3-223ENST00000621870 CITED2Q99967 270 aaPredicted RBP7.23□□□□□ -1.25
GGA3-223ENST00000621870 CLPSL1A2RUU4 121 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms