RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 IGHV3-66A0A0C4DH42 116 aa7.69□□□□□ -1.18
TNFAIP3-210ENST00000620204 SCGB3A1Q96QR1 104 aa7.69□□□□□ -1.18
TNFAIP3-210ENST00000620204 ACACBO00763 2458 aa7.69□□□□□ -1.18
TNFAIP3-210ENST00000620204 C9JAW5 83 aa7.68□□□□□ -1.18
TNFAIP3-210ENST00000620204 TM4SF5O14894 197 aa7.68□□□□□ -1.18
TNFAIP3-210ENST00000620204 FSTL3O95633 263 aa7.68□□□□□ -1.18
TNFAIP3-210ENST00000620204 IGHV3-49A0A0A0MS15 119 aa7.68□□□□□ -1.18
TNFAIP3-210ENST00000620204 TRBV7-9A0A0J9YWB2 115 aa7.68□□□□□ -1.18
TNFAIP3-210ENST00000620204 IGKV3-15P01624 115 aa7.68□□□□□ -1.18
TNFAIP3-210ENST00000620204 TMEM78Q5T7P6 136 aa7.68□□□□□ -1.18
TNFAIP3-210ENST00000620204 C9orf106Q8NAJ2 232 aa7.68□□□□□ -1.18
TNFAIP3-210ENST00000620204 IGFBPL1Q8WX77 278 aa7.68□□□□□ -1.18
TNFAIP3-210ENST00000620204 RNF125Q96EQ8 232 aa7.68□□□□□ -1.18
TNFAIP3-210ENST00000620204 GAFA1Q96PS6 74 aa7.68□□□□□ -1.18
TNFAIP3-210ENST00000620204 C2CD3Q4AC94 2353 aa7.68□□□□□ -1.18
TNFAIP3-210ENST00000620204 NBL1P41271 181 aa7.68□□□□□ -1.18
TNFAIP3-210ENST00000620204 LINC00312Q9Y6C7 94 aa7.68□□□□□ -1.18
TNFAIP3-210ENST00000620204 ZFHX4Q86UP3 3567 aa7.67□□□□□ -1.18
TNFAIP3-210ENST00000620204 GAGE12JA6NER3 117 aa7.67□□□□□ -1.18
TNFAIP3-210ENST00000620204 GAGE7O76087 117 aa7.67□□□□□ -1.18
TNFAIP3-210ENST00000620204 GAGE12FP0CL80 117 aa7.67□□□□□ -1.18
TNFAIP3-210ENST00000620204 GAGE12GP0CL81 117 aa7.67□□□□□ -1.18
TNFAIP3-210ENST00000620204 GAGE12IP0CL82 117 aa7.67□□□□□ -1.18
TNFAIP3-210ENST00000620204 SLC25A16P16260 332 aa7.67□□□□□ -1.18
TNFAIP3-210ENST00000620204 GAGE4Q13068 117 aa7.67□□□□□ -1.18
TNFAIP3-210ENST00000620204 CACNA1AO00555 2505 aa7.67□□□□□ -1.18
TNFAIP3-210ENST00000620204 NDUFB3O43676 98 aa7.67□□□□□ -1.18
TNFAIP3-210ENST00000620204 ERCC8Q13216 396 aa7.67□□□□□ -1.18
TNFAIP3-210ENST00000620204 LYRM7Q5U5X0 104 aa7.67□□□□□ -1.18
TNFAIP3-210ENST00000620204 MYMXA0A1B0GTQ4 84 aa7.67□□□□□ -1.18
TNFAIP3-210ENST00000620204 K7EM74 188 aa7.67□□□□□ -1.18
TNFAIP3-210ENST00000620204 IGHV4-39P01824 125 aa7.67□□□□□ -1.18
TNFAIP3-210ENST00000620204 CGB3P0DN86 165 aa7.67□□□□□ -1.18
TNFAIP3-210ENST00000620204 CGB7P0DN87 165 aa7.67□□□□□ -1.18
TNFAIP3-210ENST00000620204 LAGE3Q14657 143 aa7.67□□□□□ -1.18
TNFAIP3-210ENST00000620204 TMEM155Q4W5P6 130 aa7.67□□□□□ -1.18
TNFAIP3-210ENST00000620204 SIGLEC15Q6ZMC9 328 aa7.67□□□□□ -1.18
TNFAIP3-210ENST00000620204 DTX2Q86UW9 622 aa7.67□□□□□ -1.18
TNFAIP3-210ENST00000620204 MGPP08493 103 aa7.66□□□□□ -1.18
TNFAIP3-210ENST00000620204 ZNF688P0C7X2 276 aa7.66□□□□□ -1.18
TNFAIP3-210ENST00000620204 TMEM200BQ69YZ2 307 aa7.66□□□□□ -1.18
TNFAIP3-210ENST00000620204 SORL1Q92673 2214 aa7.66□□□□□ -1.18
TNFAIP3-210ENST00000620204 CCDC179H3BU77 68 aa7.66□□□□□ -1.18
TNFAIP3-210ENST00000620204 PRADC1Q9BSG0 188 aa7.66□□□□□ -1.18
TNFAIP3-210ENST00000620204 ZNF80P51504 273 aaPredicted RBP7.66□□□□□ -1.18
TNFAIP3-210ENST00000620204 FHL3Q13643 280 aa7.66□□□□□ -1.18
TNFAIP3-210ENST00000620204 C5orf64Q2M2E5 130 aa7.66□□□□□ -1.18
TNFAIP3-210ENST00000620204 TEN1Q86WV5 123 aa7.66□□□□□ -1.18
TNFAIP3-210ENST00000620204 ANKRD29Q8N6D5 301 aa7.66□□□□□ -1.18
TNFAIP3-210ENST00000620204 TACC2O95359 2948 aa7.65□□□□□ -1.18
TNFAIP3-210ENST00000620204 M0R381 172 aa7.65□□□□□ -1.18
TNFAIP3-210ENST00000620204 PPP1R27Q86WC6 154 aa7.65□□□□□ -1.18
TNFAIP3-210ENST00000620204 S100A4P26447 101 aaKnown RBP7.65□□□□□ -1.18
TNFAIP3-210ENST00000620204 SMCPP49901 116 aaPredicted RBP7.65□□□□□ -1.18
TNFAIP3-210ENST00000620204 TMEM170BQ5T4T1 132 aa7.65□□□□□ -1.18
TNFAIP3-210ENST00000620204 CFAP126Q5VTH2 177 aa7.65□□□□□ -1.18
TNFAIP3-210ENST00000620204 ZNF493Q6ZR52 646 aa7.65□□□□□ -1.18
TNFAIP3-210ENST00000620204 PRR25Q96S07 402 aa7.65□□□□□ -1.18
TNFAIP3-210ENST00000620204 FABP5P3A8MUU1 101 aa7.65□□□□□ -1.19
TNFAIP3-210ENST00000620204 IGKV1-17P01599 117 aa7.65□□□□□ -1.19
TNFAIP3-210ENST00000620204 TRGV3P03979 118 aa7.65□□□□□ -1.19
TNFAIP3-210ENST00000620204 ZNF833PQ6ZTB9 187 aa7.65□□□□□ -1.19
TNFAIP3-210ENST00000620204 MDS2Q8NDY4 140 aa7.65□□□□□ -1.19
TNFAIP3-210ENST00000620204 SHANK2-AS3Q9BTD1 123 aa7.65□□□□□ -1.19
TNFAIP3-210ENST00000620204 PRO0461Q9UI25 63 aa7.65□□□□□ -1.19
TNFAIP3-210ENST00000620204 ZFYVE26Q68DK2 2539 aa7.64□□□□□ -1.19
TNFAIP3-210ENST00000620204 TMEM262E9PQX1 116 aa7.64□□□□□ -1.19
TNFAIP3-210ENST00000620204 MORN3Q6PF18 240 aaPredicted RBP7.64□□□□□ -1.19
TNFAIP3-210ENST00000620204 CTSZQ9UBR2 303 aa7.64□□□□□ -1.19
TNFAIP3-210ENST00000620204 IGHV3-64A0A075B6Q5 118 aa7.64□□□□□ -1.19
TNFAIP3-210ENST00000620204 H7C1H1 209 aa7.64□□□□□ -1.19
TNFAIP3-210ENST00000620204 TCL1BO95988 128 aa7.64□□□□□ -1.19
TNFAIP3-210ENST00000620204 IGHV1-46P01743 117 aa7.64□□□□□ -1.19
TNFAIP3-210ENST00000620204 PSMG4Q5JS54 123 aa7.64□□□□□ -1.19
TNFAIP3-210ENST00000620204 KALRNO60229 2985 aa7.64□□□□□ -1.19
TNFAIP3-210ENST00000620204 TSPAN13O95857 204 aa7.64□□□□□ -1.19
TNFAIP3-210ENST00000620204 SRSF1Q07955 248 aaKnown RBP eCLIP7.64□□□□□ -1.19
TNFAIP3-210ENST00000620204 ATMQ13315 3056 aa7.63□□□□□ -1.19
TNFAIP3-210ENST00000620204 A0A087WX48 190 aa7.63□□□□□ -1.19
TNFAIP3-210ENST00000620204 TRAV4A0A0B4J268 109 aa7.63□□□□□ -1.19
TNFAIP3-210ENST00000620204 PLNP26678 52 aa7.63□□□□□ -1.19
TNFAIP3-210ENST00000620204 RPL32P62910 135 aaKnown RBP7.63□□□□□ -1.19
TNFAIP3-210ENST00000620204 TAL2Q16559 108 aa7.63□□□□□ -1.19
TNFAIP3-210ENST00000620204 FAM159AQ6UWV7 190 aa7.63□□□□□ -1.19
TNFAIP3-210ENST00000620204 LYPD2Q6UXB3 125 aa7.63□□□□□ -1.19
TNFAIP3-210ENST00000620204 NTN5Q8WTR8 489 aaPredicted RBP7.63□□□□□ -1.19
TNFAIP3-210ENST00000620204 PLEKHB2Q96CS7 222 aa7.63□□□□□ -1.19
TNFAIP3-210ENST00000620204 CARD19Q96LW7 228 aa7.63□□□□□ -1.19
TNFAIP3-210ENST00000620204 CITED1Q99966 193 aa7.63□□□□□ -1.19
TNFAIP3-210ENST00000620204 PRSS2P07478 247 aa7.63□□□□□ -1.19
TNFAIP3-210ENST00000620204 Q8N8P6 123 aa7.63□□□□□ -1.19
TNFAIP3-210ENST00000620204 OR11H6Q8NGC7 330 aa7.63□□□□□ -1.19
TNFAIP3-210ENST00000620204 SIGLEC9Q9Y336 463 aa7.63□□□□□ -1.19
TNFAIP3-210ENST00000620204 PCSK5Q92824 1860 aa7.63□□□□□ -1.19
TNFAIP3-210ENST00000620204 IFITM1P13164 125 aa7.63□□□□□ -1.19
TNFAIP3-210ENST00000620204 GLRXP35754 106 aa7.63□□□□□ -1.19
TNFAIP3-210ENST00000620204 MEIG1Q5JSS6 88 aa7.63□□□□□ -1.19
TNFAIP3-210ENST00000620204 TRPT1Q86TN4 253 aaKnown RBP7.63□□□□□ -1.19
TNFAIP3-210ENST00000620204 RNF182Q8N6D2 247 aa7.63□□□□□ -1.19
TNFAIP3-210ENST00000620204 F8VRH5 84 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms