RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 PSMG4Q5JS54 123 aa3.05□□□□□ -1.92
UBE2D3-233ENST00000618836 ZNF645Q8N7E2 425 aa3.05□□□□□ -1.92
UBE2D3-233ENST00000618836 Q8N8P6 123 aa3.05□□□□□ -1.92
UBE2D3-233ENST00000618836 XCL2Q9UBD3 114 aa3.05□□□□□ -1.92
UBE2D3-233ENST00000618836 PHF3Q92576 2039 aaKnown RBP3.04□□□□□ -1.92
UBE2D3-233ENST00000618836 NOTCH4Q99466 2003 aa3.04□□□□□ -1.92
UBE2D3-233ENST00000618836 KMT2AQ03164 3969 aa3.04□□□□□ -1.92
UBE2D3-233ENST00000618836 F2Z2F3 143 aa3.04□□□□□ -1.92
UBE2D3-233ENST00000618836 TMEM256-PLSCR3K7ERE1 68 aa3.04□□□□□ -1.92
UBE2D3-233ENST00000618836 IGLV3-27P01718 113 aa3.04□□□□□ -1.92
UBE2D3-233ENST00000618836 CCL4P13236 92 aa3.04□□□□□ -1.92
UBE2D3-233ENST00000618836 MFAP2P55001 183 aa3.04□□□□□ -1.92
UBE2D3-233ENST00000618836 ATP1A1-AS1Q5TC04 95 aa3.04□□□□□ -1.92
UBE2D3-233ENST00000618836 FAM219BQ5XKK7 198 aa3.04□□□□□ -1.92
UBE2D3-233ENST00000618836 PRNTQ86SH4 94 aa3.04□□□□□ -1.92
UBE2D3-233ENST00000618836 RNASE6Q93091 150 aaKnown RBP3.04□□□□□ -1.92
UBE2D3-233ENST00000618836 MGST2Q99735 147 aa3.04□□□□□ -1.92
UBE2D3-233ENST00000618836 ZNF747Q9BV97 191 aa3.04□□□□□ -1.92
UBE2D3-233ENST00000618836 ZNF492Q9P255 531 aa3.04□□□□□ -1.92
UBE2D3-233ENST00000618836 SELENOKQ9Y6D0 94 aa3.04□□□□□ -1.92
UBE2D3-233ENST00000618836 IGKV1-9A0A0C4DH69 117 aa3.04□□□□□ -1.92
UBE2D3-233ENST00000618836 LOC389332A0A1B0GUA5 103 aa3.04□□□□□ -1.92
UBE2D3-233ENST00000618836 CAV3P56539 151 aa3.04□□□□□ -1.92
UBE2D3-233ENST00000618836 CEMP1Q6PRD7 247 aaPredicted RBP3.04□□□□□ -1.92
UBE2D3-233ENST00000618836 ZFP2Q6ZN57 461 aa3.04□□□□□ -1.92
UBE2D3-233ENST00000618836 BAGE3Q86Y29 109 aa3.04□□□□□ -1.92
UBE2D3-233ENST00000618836 BAGE2Q86Y30 109 aa3.04□□□□□ -1.92
UBE2D3-233ENST00000618836 OPRPNQ99935 248 aaPredicted RBP3.04□□□□□ -1.92
UBE2D3-233ENST00000618836 MOB4Q9Y3A3 225 aa3.04□□□□□ -1.92
UBE2D3-233ENST00000618836 FRYLO94915 3013 aa3.04□□□□□ -1.92
UBE2D3-233ENST00000618836 VPS13AQ96RL7 3174 aa3.04□□□□□ -1.92
UBE2D3-233ENST00000618836 COL6A6A6NMZ7 2263 aa3.04□□□□□ -1.92
UBE2D3-233ENST00000618836 IGHV6-1A0A0B4J1U7 121 aa3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 SLC25A14O95258 325 aaPredicted RBP3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 HBDP02042 147 aa3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 SLC25A16P16260 332 aa3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 RPL23P62829 140 aaKnown RBP3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 Q6ZPA2 131 aa3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 Q6ZSV7 163 aa3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 DIRC1Q969H9 104 aa3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 VSIG2Q96IQ7 327 aa3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 PARP12Q9H0J9 701 aaKnown RBP3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 C6orf106Q9H6K1 298 aaPredicted RBP3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 TRIP12Q14669 1992 aaPredicted RBP3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 LRRK1Q38SD2 2015 aa3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 IGHV1-24A0A0C4DH33 117 aa3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 A0A0G2JRQ6 117 aa3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 ZNF736B4DX44 427 aaPredicted RBP3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 E7EQL1 145 aa3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 COX7A2LO14548 114 aa3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 UBE2D3P61077 147 aa3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 UBE2D2P62837 147 aa3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 C11orf71Q6IPW1 123 aa3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 ZNF491Q8N8L2 437 aa3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 ZNRF1Q8ND25 227 aa3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 TAF15Q92804 592 aaKnown RBP eCLIP3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 PLEKHA3Q9HB20 300 aa3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 LYSTQ99698 3801 aa3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 BRWD1Q9NSI6 2320 aa3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 KIAA1549Q9HCM3 1950 aa3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 C19orf71A6NCJ1 209 aa3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 RBMY1BA6NDE4 496 aaKnown RBP3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 RBMY1EA6NEQ0 496 aaKnown RBP3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 LINC00473A8K010 186 aa3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 NXPH4O95158 308 aa3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 IGHV3-9P01782 118 aa3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 ACYP1P07311 99 aa3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 RBMY1DP0C7P1 496 aaKnown RBP3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 RBMY1A1P0DJD3 496 aaKnown RBP3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 C6orf99Q4VX62 202 aa3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 NOXRED1Q6NXP6 359 aa3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 MARCH3Q86UD3 253 aa3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 TIMM17AQ99595 171 aa3.03□□□□□ -1.92
UBE2D3-233ENST00000618836 C12orf77C9JDV5 145 aa3.02□□□□□ -1.93
UBE2D3-233ENST00000618836 CDK2AP2O75956 126 aa3.02□□□□□ -1.93
UBE2D3-233ENST00000618836 SCGB1C2P0DMR2 95 aa3.02□□□□□ -1.93
UBE2D3-233ENST00000618836 AQP1P29972 269 aa3.02□□□□□ -1.93
UBE2D3-233ENST00000618836 RNASE4P34096 147 aaKnown RBP3.02□□□□□ -1.93
UBE2D3-233ENST00000618836 RPS18P62269 152 aaKnown RBP3.02□□□□□ -1.93
UBE2D3-233ENST00000618836 HMGN2P46Q86SG4 172 aa3.02□□□□□ -1.93
UBE2D3-233ENST00000618836 GGNQ86UU5 652 aa3.02□□□□□ -1.93
UBE2D3-233ENST00000618836 TMEM252Q8N6L7 170 aa3.02□□□□□ -1.93
UBE2D3-233ENST00000618836 KRTAP4-8Q9BYQ9 185 aa3.02□□□□□ -1.93
UBE2D3-233ENST00000618836 ZNF702PQ9H963 129 aa3.02□□□□□ -1.93
UBE2D3-233ENST00000618836 V9GY05 133 aa3.02□□□□□ -1.93
UBE2D3-233ENST00000618836 A0A1W2PQD3 144 aa3.02□□□□□ -1.93
UBE2D3-233ENST00000618836 A6NN06 94 aa3.02□□□□□ -1.93
UBE2D3-233ENST00000618836 BMPR1BO00238 502 aa3.02□□□□□ -1.93
UBE2D3-233ENST00000618836 CCKP06307 115 aa3.02□□□□□ -1.93
UBE2D3-233ENST00000618836 PSMB2P49721 201 aa3.02□□□□□ -1.93
UBE2D3-233ENST00000618836 CCL20P78556 96 aa3.02□□□□□ -1.93
UBE2D3-233ENST00000618836 MDP1Q86V88 176 aa3.02□□□□□ -1.93
UBE2D3-233ENST00000618836 GPHB5Q86YW7 130 aa3.02□□□□□ -1.93
UBE2D3-233ENST00000618836 FAM103A1Q9BTL3 118 aaKnown RBP3.02□□□□□ -1.93
UBE2D3-233ENST00000618836 SPRR3Q9UBC9 169 aa3.02□□□□□ -1.93
UBE2D3-233ENST00000618836 IGF2RP11717 2491 aa3.02□□□□□ -1.93
UBE2D3-233ENST00000618836 TCRBV5S1A1TA0A578 114 aa3.02□□□□□ -1.93
UBE2D3-233ENST00000618836 C16orf97H3BN30 126 aa3.02□□□□□ -1.93
UBE2D3-233ENST00000618836 GNLYP22749 145 aa3.02□□□□□ -1.93
UBE2D3-233ENST00000618836 BRWD1-AS2P59051 145 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms