RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 M0R2Z0 102 aa0.74□□□□□ -2.29
TARDBP-220ENST00000618606 SMIM24O75264 130 aa0.74□□□□□ -2.29
TARDBP-220ENST00000618606 PRB4P10163 310 aaPredicted RBP0.74□□□□□ -2.29
TARDBP-220ENST00000618606 HLA-DRB4P13762 266 aa0.74□□□□□ -2.29
TARDBP-220ENST00000618606 IL9P15248 144 aa0.74□□□□□ -2.29
TARDBP-220ENST00000618606 KDELR1P24390 212 aa0.74□□□□□ -2.29
TARDBP-220ENST00000618606 ETV6P41212 452 aa0.74□□□□□ -2.29
TARDBP-220ENST00000618606 LSM3P62310 102 aaKnown RBP0.74□□□□□ -2.29
TARDBP-220ENST00000618606 CCDC58Q4VC31 144 aa0.74□□□□□ -2.29
TARDBP-220ENST00000618606 CLLU1Q5K131 121 aa0.74□□□□□ -2.29
TARDBP-220ENST00000618606 CSAG1Q6PB30 78 aa0.74□□□□□ -2.29
TARDBP-220ENST00000618606 LINC00322Q6ZN03 302 aaPredicted RBP0.74□□□□□ -2.29
TARDBP-220ENST00000618606 C10orf111Q8N326 155 aa0.74□□□□□ -2.29
TARDBP-220ENST00000618606 DEFB119Q8N690 84 aa0.74□□□□□ -2.29
TARDBP-220ENST00000618606 TCEAL4Q96EI5 215 aa0.74□□□□□ -2.29
TARDBP-220ENST00000618606 LPAR5Q9H1C0 372 aa0.74□□□□□ -2.29
TARDBP-220ENST00000618606 TMEM14CQ9P0S9 112 aa0.74□□□□□ -2.29
TARDBP-220ENST00000618606 MPC1Q9Y5U8 109 aa0.74□□□□□ -2.29
TARDBP-220ENST00000618606 HLA-DRB4X5D2U9 266 aa0.74□□□□□ -2.29
TARDBP-220ENST00000618606 ADGRB2O60241 1585 aa0.74□□□□□ -2.29
TARDBP-220ENST00000618606 PLXNA4Q9HCM2 1894 aa0.73□□□□□ -2.29
TARDBP-220ENST00000618606 SCN3AQ9NY46 2000 aa0.73□□□□□ -2.29
TARDBP-220ENST00000618606 JMJD7-PLA2G4BH0Y9G9 81 aa0.73□□□□□ -2.29
TARDBP-220ENST00000618606 K7ERU9 68 aa0.73□□□□□ -2.29
TARDBP-220ENST00000618606 IGLV3-1P01715 115 aa0.73□□□□□ -2.29
TARDBP-220ENST00000618606 IGKCP01834 107 aa0.73□□□□□ -2.29
TARDBP-220ENST00000618606 TFF1P04155 84 aa0.73□□□□□ -2.29
TARDBP-220ENST00000618606 ARL14EPLP0DKL9 152 aa0.73□□□□□ -2.29
TARDBP-220ENST00000618606 HIST1H1BP16401 226 aaKnown RBP0.73□□□□□ -2.29
TARDBP-220ENST00000618606 EVI2AP22794 236 aa0.73□□□□□ -2.29
TARDBP-220ENST00000618606 SARNPP82979 210 aaKnown RBP0.73□□□□□ -2.29
TARDBP-220ENST00000618606 OR10AC1Q8NH08 325 aa0.73□□□□□ -2.29
TARDBP-220ENST00000618606 ODF3Q96PU9 254 aa0.73□□□□□ -2.29
TARDBP-220ENST00000618606 PFDN5Q99471 154 aa0.73□□□□□ -2.29
TARDBP-220ENST00000618606 SMIM7Q9BQ49 75 aa0.73□□□□□ -2.29
TARDBP-220ENST00000618606 METTL1Q9UBP6 276 aaKnown RBP0.73□□□□□ -2.29
TARDBP-220ENST00000618606 LSM2Q9Y333 95 aaKnown RBP0.73□□□□□ -2.29
TARDBP-220ENST00000618606 KDM5CP41229 1560 aa0.73□□□□□ -2.29
TARDBP-220ENST00000618606 RTTNQ86VV8 2226 aa0.73□□□□□ -2.29
TARDBP-220ENST00000618606 ZCCHC6Q5VYS8 1495 aaKnown RBP0.73□□□□□ -2.29
TARDBP-220ENST00000618606 TENM3Q9P273 2699 aa0.72□□□□□ -2.29
TARDBP-220ENST00000618606 USP54Q70EL1 1684 aa0.72□□□□□ -2.29
TARDBP-220ENST00000618606 ALPK2Q86TB3 2170 aa0.72□□□□□ -2.29
TARDBP-220ENST00000618606 BICRAQ9NZM4 1560 aa0.72□□□□□ -2.29
TARDBP-220ENST00000618606 BBIP1A8MTZ0 92 aa0.72□□□□□ -2.29
TARDBP-220ENST00000618606 IGHV3-33P01772 117 aa0.72□□□□□ -2.29
TARDBP-220ENST00000618606 IL7P13232 177 aa0.72□□□□□ -2.29
TARDBP-220ENST00000618606 KRTAP10-4P60372 401 aaPredicted RBP0.72□□□□□ -2.29
TARDBP-220ENST00000618606 IQCJQ1A5X6 159 aa0.72□□□□□ -2.29
TARDBP-220ENST00000618606 KRTAP21-3Q3LHN1 58 aa0.72□□□□□ -2.29
TARDBP-220ENST00000618606 IZUMO2Q6UXV1 221 aa0.72□□□□□ -2.29
TARDBP-220ENST00000618606 MED12LQ86YW9 2145 aa0.72□□□□□ -2.29
TARDBP-220ENST00000618606 CTAGE3PQ8IX95 158 aa0.72□□□□□ -2.29
TARDBP-220ENST00000618606 VPS25Q9BRG1 176 aa0.72□□□□□ -2.29
TARDBP-220ENST00000618606 TPT1P8Q9HAU6 139 aa0.72□□□□□ -2.29
TARDBP-220ENST00000618606 C22orf24Q9Y442 160 aa0.72□□□□□ -2.29
TARDBP-220ENST00000618606 KIAA1549Q9HCM3 1950 aa0.72□□□□□ -2.29
TARDBP-220ENST00000618606 SDK1Q7Z5N4 2213 aa0.72□□□□□ -2.29
TARDBP-220ENST00000618606 TANC2Q9HCD6 1990 aa0.71□□□□□ -2.3
TARDBP-220ENST00000618606 A0A1W2PPB8 328 aa0.71□□□□□ -2.3
TARDBP-220ENST00000618606 A0A1W2PRS3 328 aa0.71□□□□□ -2.3
TARDBP-220ENST00000618606 IFITM5A6NNB3 132 aa0.71□□□□□ -2.3
TARDBP-220ENST00000618606 KIR3DP1A8MWS1 328 aa0.71□□□□□ -2.3
TARDBP-220ENST00000618606 J3QR89 54 aa0.71□□□□□ -2.3
TARDBP-220ENST00000618606 NPFFO15130 113 aa0.71□□□□□ -2.3
TARDBP-220ENST00000618606 TSPAN19P0C672 248 aa0.71□□□□□ -2.3
TARDBP-220ENST00000618606 FXYD4P59646 89 aa0.71□□□□□ -2.3
TARDBP-220ENST00000618606 DNAJB13P59910 316 aa0.71□□□□□ -2.3
TARDBP-220ENST00000618606 NCS1P62166 190 aa0.71□□□□□ -2.3
TARDBP-220ENST00000618606 RPS25P62851 125 aaKnown RBP0.71□□□□□ -2.3
TARDBP-220ENST00000618606 OCIAD2Q56VL3 154 aa0.71□□□□□ -2.3
TARDBP-220ENST00000618606 SNX29P2Q8IUI4 249 aa0.71□□□□□ -2.3
TARDBP-220ENST00000618606 MMGT1Q8N4V1 131 aa0.71□□□□□ -2.3
TARDBP-220ENST00000618606 TCTEX1D1Q8N7M0 179 aa0.71□□□□□ -2.3
TARDBP-220ENST00000618606 LINC00526Q96FQ7 95 aa0.71□□□□□ -2.3
TARDBP-220ENST00000618606 TSC22D3Q99576 134 aa0.71□□□□□ -2.3
TARDBP-220ENST00000618606 SLC35B3Q9H1N7 401 aa0.71□□□□□ -2.3
TARDBP-220ENST00000618606 ERG28Q9UKR5 140 aa0.71□□□□□ -2.3
TARDBP-220ENST00000618606 MYLKQ15746 1914 aa0.71□□□□□ -2.3
TARDBP-220ENST00000618606 OVOS2A0A0J9YW53 1432 aa0.71□□□□□ -2.3
TARDBP-220ENST00000618606 OVOS2Q6IE36 1432 aa0.71□□□□□ -2.3
TARDBP-220ENST00000618606 PRG4Q92954 1404 aaPredicted RBP0.71□□□□□ -2.3
TARDBP-220ENST00000618606 ERBINQ96RT1 1412 aa0.71□□□□□ -2.3
TARDBP-220ENST00000618606 POLEQ07864 2286 aa0.71□□□□□ -2.3
TARDBP-220ENST00000618606 DIDO1Q9BTC0 2240 aaKnown RBP0.7□□□□□ -2.3
TARDBP-220ENST00000618606 ZFC3H1O60293 1989 aaKnown RBP0.7□□□□□ -2.3
TARDBP-220ENST00000618606 EXPH5Q8NEV8 1989 aa0.7□□□□□ -2.3
TARDBP-220ENST00000618606 ARFGEF3Q5TH69 2177 aa0.7□□□□□ -2.3
TARDBP-220ENST00000618606 TRAV17A0A0B4J275 112 aa0.7□□□□□ -2.3
TARDBP-220ENST00000618606 A0A0J9YY99 117 aa0.7□□□□□ -2.3
TARDBP-220ENST00000618606 SULT1C4O75897 302 aa0.7□□□□□ -2.3
TARDBP-220ENST00000618606 RBP4P02753 201 aa0.7□□□□□ -2.3
TARDBP-220ENST00000618606 PLGLB1Q02325 96 aa0.7□□□□□ -2.3
TARDBP-220ENST00000618606 ASB16-AS1Q495Z4 193 aa0.7□□□□□ -2.3
TARDBP-220ENST00000618606 SPATA45Q537H7 98 aa0.7□□□□□ -2.3
TARDBP-220ENST00000618606 MIC13Q5XKP0 118 aa0.7□□□□□ -2.3
TARDBP-220ENST00000618606 LYPD5Q6UWN5 251 aa0.7□□□□□ -2.3
TARDBP-220ENST00000618606 IDO2Q6ZQW0 420 aa0.7□□□□□ -2.3
TARDBP-220ENST00000618606 C3orf62Q6ZUJ4 267 aa0.7□□□□□ -2.3
TARDBP-220ENST00000618606 SBSPONQ8IVN8 264 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms