RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 KLRD1Q13241 179 aa11.05□□□□□ -0.64
TNFRSF11A-205ENST00000616710 MEIG1Q5JSS6 88 aa11.05□□□□□ -0.64
TNFRSF11A-205ENST00000616710 NCKAP5O14513 1909 aa11.05□□□□□ -0.64
TNFRSF11A-205ENST00000616710 TRAV8-4A0A0B4J246 113 aa11.05□□□□□ -0.64
TNFRSF11A-205ENST00000616710 A0A0U1RRA0 63 aa11.05□□□□□ -0.64
TNFRSF11A-205ENST00000616710 ZNF688P0C7X2 276 aa11.05□□□□□ -0.64
TNFRSF11A-205ENST00000616710 MRPL23Q16540 153 aaKnown RBP11.05□□□□□ -0.64
TNFRSF11A-205ENST00000616710 NFE4Q86UQ8 179 aa11.05□□□□□ -0.64
TNFRSF11A-205ENST00000616710 RNF182Q8N6D2 247 aa11.05□□□□□ -0.64
TNFRSF11A-205ENST00000616710 COX6CP09669 75 aa11.05□□□□□ -0.64
TNFRSF11A-205ENST00000616710 ANKRD29Q8N6D5 301 aa11.05□□□□□ -0.64
TNFRSF11A-205ENST00000616710 TRGV9Q99603 122 aa11.05□□□□□ -0.64
TNFRSF11A-205ENST00000616710 MYMXA0A1B0GTQ4 84 aa11.04□□□□□ -0.64
TNFRSF11A-205ENST00000616710 FAM159AQ6UWV7 190 aa11.04□□□□□ -0.64
TNFRSF11A-205ENST00000616710 DTX2Q86UW9 622 aa11.04□□□□□ -0.64
TNFRSF11A-205ENST00000616710 TMEM167AQ8TBQ9 72 aa11.04□□□□□ -0.64
TNFRSF11A-205ENST00000616710 ERG28Q9UKR5 140 aa11.04□□□□□ -0.64
TNFRSF11A-205ENST00000616710 C16orf97H3BN30 126 aa11.04□□□□□ -0.64
TNFRSF11A-205ENST00000616710 PPP1R27Q86WC6 154 aa11.04□□□□□ -0.64
TNFRSF11A-205ENST00000616710 CEP295Q9C0D2 2601 aa11.04□□□□□ -0.64
TNFRSF11A-205ENST00000616710 LY6G6EA0A0G2JKS1 128 aa11.04□□□□□ -0.64
TNFRSF11A-205ENST00000616710 U3KQA8 63 aa11.04□□□□□ -0.64
TNFRSF11A-205ENST00000616710 MFAP4P55083 255 aa11.03□□□□□ -0.64
TNFRSF11A-205ENST00000616710 DEFB123Q8N688 67 aa11.03□□□□□ -0.64
TNFRSF11A-205ENST00000616710 MSMPQ1L6U9 139 aa11.03□□□□□ -0.64
TNFRSF11A-205ENST00000616710 TRPT1Q86TN4 253 aaKnown RBP11.03□□□□□ -0.64
TNFRSF11A-205ENST00000616710 IFITM1P13164 125 aa11.03□□□□□ -0.64
TNFRSF11A-205ENST00000616710 SRSF1Q07955 248 aaKnown RBP eCLIP11.03□□□□□ -0.64
TNFRSF11A-205ENST00000616710 TMEM200BQ69YZ2 307 aa11.03□□□□□ -0.64
TNFRSF11A-205ENST00000616710 TRGV3P03979 118 aa11.02□□□□□ -0.64
TNFRSF11A-205ENST00000616710 ZNF56Q15929 161 aa11.02□□□□□ -0.64
TNFRSF11A-205ENST00000616710 C16orf92Q96LL3 132 aa11.02□□□□□ -0.64
TNFRSF11A-205ENST00000616710 GAFA1Q96PS6 74 aa11.02□□□□□ -0.64
TNFRSF11A-205ENST00000616710 FAM27E3Q08E93 113 aa11.02□□□□□ -0.65
TNFRSF11A-205ENST00000616710 COLQQ9Y215 455 aaPredicted RBP11.02□□□□□ -0.65
TNFRSF11A-205ENST00000616710 LYNX1G3V0Z9 82 aa11.02□□□□□ -0.65
TNFRSF11A-205ENST00000616710 SLC25A20O43772 301 aa11.02□□□□□ -0.65
TNFRSF11A-205ENST00000616710 LYNX1P0DP58 116 aa11.02□□□□□ -0.65
TNFRSF11A-205ENST00000616710 ATMQ13315 3056 aa11.01□□□□□ -0.65
TNFRSF11A-205ENST00000616710 TEN1Q86WV5 123 aa11.01□□□□□ -0.65
TNFRSF11A-205ENST00000616710 DMDP11532 3685 aa11.01□□□□□ -0.65
TNFRSF11A-205ENST00000616710 IGKV3-20P01619 116 aa11.01□□□□□ -0.65
TNFRSF11A-205ENST00000616710 LYPD2Q6UXB3 125 aa11.01□□□□□ -0.65
TNFRSF11A-205ENST00000616710 OR11H6Q8NGC7 330 aa11.01□□□□□ -0.65
TNFRSF11A-205ENST00000616710 H7C1H1 209 aa11.01□□□□□ -0.65
TNFRSF11A-205ENST00000616710 WT1P19544 449 aaPredicted RBP11.01□□□□□ -0.65
TNFRSF11A-205ENST00000616710 TCF15Q12870 199 aa11.01□□□□□ -0.65
TNFRSF11A-205ENST00000616710 C14orf178Q8N769 122 aaPredicted RBP11.01□□□□□ -0.65
TNFRSF11A-205ENST00000616710 C15orf53Q8NAA6 179 aa11.01□□□□□ -0.65
TNFRSF11A-205ENST00000616710 HHLA3Q9XRX5 114 aa11.01□□□□□ -0.65
TNFRSF11A-205ENST00000616710 TRAV4A0A0B4J268 109 aa11□□□□□ -0.65
TNFRSF11A-205ENST00000616710 TRAV17A0A0B4J275 112 aa11□□□□□ -0.65
TNFRSF11A-205ENST00000616710 PRR25Q96S07 402 aa11□□□□□ -0.65
TNFRSF11A-205ENST00000616710 TM2D2Q9BX73 214 aa11□□□□□ -0.65
TNFRSF11A-205ENST00000616710 RS1O15537 224 aa11□□□□□ -0.65
TNFRSF11A-205ENST00000616710 TCL1BO95988 128 aa11□□□□□ -0.65
TNFRSF11A-205ENST00000616710 IGHV1-46P01743 117 aa11□□□□□ -0.65
TNFRSF11A-205ENST00000616710 ZNF80P51504 273 aaPredicted RBP11□□□□□ -0.65
TNFRSF11A-205ENST00000616710 RPL32P62910 135 aaKnown RBP11□□□□□ -0.65
TNFRSF11A-205ENST00000616710 LINC00312Q9Y6C7 94 aa11□□□□□ -0.65
TNFRSF11A-205ENST00000616710 WI2-2373I1.2A0A1W2PRP0 233 aa11□□□□□ -0.65
TNFRSF11A-205ENST00000616710 MYCNOSP40205 109 aa11□□□□□ -0.65
TNFRSF11A-205ENST00000616710 CDIP1Q9H305 208 aa11□□□□□ -0.65
TNFRSF11A-205ENST00000616710 HIGD1BQ9P298 99 aa11□□□□□ -0.65
TNFRSF11A-205ENST00000616710 IGKV3D-20A0A0C4DH25 116 aa10.99□□□□□ -0.65
TNFRSF11A-205ENST00000616710 PLNP26678 52 aa10.99□□□□□ -0.65
TNFRSF11A-205ENST00000616710 ADIPOQQ15848 244 aa10.99□□□□□ -0.65
TNFRSF11A-205ENST00000616710 CR1LQ2VPA4 569 aa10.99□□□□□ -0.65
TNFRSF11A-205ENST00000616710 SIGLEC15Q6ZMC9 328 aa10.99□□□□□ -0.65
TNFRSF11A-205ENST00000616710 PSMG4Q5JS54 123 aa10.99□□□□□ -0.65
TNFRSF11A-205ENST00000616710 PLEKHB2Q96CS7 222 aa10.99□□□□□ -0.65
TNFRSF11A-205ENST00000616710 ADARB2-AS1A8MUL3 147 aa10.99□□□□□ -0.65
TNFRSF11A-205ENST00000616710 IGLV2-11P01706 119 aa10.99□□□□□ -0.65
TNFRSF11A-205ENST00000616710 SRSF6Q13247 344 aaKnown RBP10.99□□□□□ -0.65
TNFRSF11A-205ENST00000616710 POU2AF1Q16633 256 aa10.99□□□□□ -0.65
TNFRSF11A-205ENST00000616710 IL17RELQ6ZVW7 336 aa10.99□□□□□ -0.65
TNFRSF11A-205ENST00000616710 THAP8Q8NA92 274 aa10.99□□□□□ -0.65
TNFRSF11A-205ENST00000616710 VCX2Q9H322 139 aa10.98□□□□□ -0.65
TNFRSF11A-205ENST00000616710 ANKHD1Q8IWZ3 2542 aaKnown RBP10.98□□□□□ -0.65
TNFRSF11A-205ENST00000616710 CSPG4Q6UVK1 2322 aa10.98□□□□□ -0.65
TNFRSF11A-205ENST00000616710 SHANK2-AS3Q9BTD1 123 aa10.98□□□□□ -0.65
TNFRSF11A-205ENST00000616710 SONP18583 2426 aaKnown RBP10.98□□□□□ -0.65
TNFRSF11A-205ENST00000616710 MAP1AP78559 2803 aaPredicted RBP10.98□□□□□ -0.65
TNFRSF11A-205ENST00000616710 F8VRH5 84 aa10.98□□□□□ -0.65
TNFRSF11A-205ENST00000616710 GLRXP35754 106 aa10.98□□□□□ -0.65
TNFRSF11A-205ENST00000616710 C2orf82Q6UX34 121 aa10.98□□□□□ -0.65
TNFRSF11A-205ENST00000616710 C21orf62Q9NYP8 219 aa10.98□□□□□ -0.65
TNFRSF11A-205ENST00000616710 IGKV1-17P01599 117 aa10.97□□□□□ -0.65
TNFRSF11A-205ENST00000616710 DGAT2L7PQ6IED9 249 aa10.97□□□□□ -0.65
TNFRSF11A-205ENST00000616710 SIGLEC9Q9Y336 463 aa10.97□□□□□ -0.65
TNFRSF11A-205ENST00000616710 ZNF474Q6S9Z5 364 aaPredicted RBP10.97□□□□□ -0.65
TNFRSF11A-205ENST00000616710 CTSZQ9UBR2 303 aa10.97□□□□□ -0.65
TNFRSF11A-205ENST00000616710 A0A087WX48 190 aa10.97□□□□□ -0.65
TNFRSF11A-205ENST00000616710 ID1P41134 155 aa10.97□□□□□ -0.65
TNFRSF11A-205ENST00000616710 NDUFV3P56181 108 aaKnown RBP10.97□□□□□ -0.65
TNFRSF11A-205ENST00000616710 Q6ZQT7 251 aa10.96□□□□□ -0.65
TNFRSF11A-205ENST00000616710 ADGRG4Q8IZF6 3080 aa10.96□□□□□ -0.65
TNFRSF11A-205ENST00000616710 CFAP126Q5VTH2 177 aa10.96□□□□□ -0.65
TNFRSF11A-205ENST00000616710 PHLDA1Q8WV24 401 aaPredicted RBP10.96□□□□□ -0.65
TNFRSF11A-205ENST00000616710 TLN1Q9Y490 2541 aaKnown RBP10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 6.1 ms