RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 NTN5Q8WTR8 489 aaPredicted RBP12.05□□□□□ -0.48
NOP56-220ENST00000616692 HEATR1Q9H583 2144 aaKnown RBP12.05□□□□□ -0.48
NOP56-220ENST00000616692 CCL28Q9NRJ3 127 aa12.05□□□□□ -0.48
NOP56-220ENST00000616692 PCNX1Q96RV3 2341 aa12.05□□□□□ -0.48
NOP56-220ENST00000616692 C19orf71A6NCJ1 209 aa12.05□□□□□ -0.48
NOP56-220ENST00000616692 LINC01619G3V211 115 aa12.05□□□□□ -0.48
NOP56-220ENST00000616692 CCL3P10147 92 aa12.05□□□□□ -0.48
NOP56-220ENST00000616692 HLA-DMBP28068 263 aa12.05□□□□□ -0.48
NOP56-220ENST00000616692 SFTA2Q6UW10 78 aa12.05□□□□□ -0.48
NOP56-220ENST00000616692 NABP1Q96AH0 204 aa12.05□□□□□ -0.48
NOP56-220ENST00000616692 CALYQ9NYX4 217 aa12.05□□□□□ -0.48
NOP56-220ENST00000616692 WDR83OSQ9Y284 106 aa12.05□□□□□ -0.48
NOP56-220ENST00000616692 PRRC2AP48634 2157 aaKnown RBP12.05□□□□□ -0.48
NOP56-220ENST00000616692 IGKV1D-13A0A0B4J2D9 117 aa12.04□□□□□ -0.48
NOP56-220ENST00000616692 MS4A18H0YCH9 400 aa12.04□□□□□ -0.48
NOP56-220ENST00000616692 IGKV1-13P0DP09 117 aa12.04□□□□□ -0.48
NOP56-220ENST00000616692 APRG1Q8IVJ8 170 aa12.04□□□□□ -0.48
NOP56-220ENST00000616692 DKK2Q9UBU2 259 aa12.04□□□□□ -0.48
NOP56-220ENST00000616692 AGRNO00468 2067 aa12.04□□□□□ -0.48
NOP56-220ENST00000616692 A8MZ25 164 aa12.04□□□□□ -0.48
NOP56-220ENST00000616692 IGHV3OR15-7A0A075B7D8 119 aa12.04□□□□□ -0.48
NOP56-220ENST00000616692 LGALS9O00182 355 aa12.04□□□□□ -0.48
NOP56-220ENST00000616692 IGKV1-5P01602 117 aa12.04□□□□□ -0.48
NOP56-220ENST00000616692 SEM1Q6ZVN7 128 aa12.04□□□□□ -0.48
NOP56-220ENST00000616692 PRIMA1Q86XR5 153 aa12.04□□□□□ -0.48
NOP56-220ENST00000616692 ALPK2Q86TB3 2170 aa12.03□□□□□ -0.48
NOP56-220ENST00000616692 ASPHD1Q5U4P2 390 aa12.03□□□□□ -0.48
NOP56-220ENST00000616692 PRSS3P2Q8NHM4 247 aa12.03□□□□□ -0.48
NOP56-220ENST00000616692 IFI27L1Q96BM0 104 aa12.03□□□□□ -0.48
NOP56-220ENST00000616692 SHANK2-AS3Q9BTD1 123 aa12.03□□□□□ -0.48
NOP56-220ENST00000616692 AGPAT4-IT1Q9H0P7 198 aa12.03□□□□□ -0.48
NOP56-220ENST00000616692 ADGRG4Q8IZF6 3080 aa12.03□□□□□ -0.48
NOP56-220ENST00000616692 DCHS2Q6V1P9 2916 aa12.03□□□□□ -0.48
NOP56-220ENST00000616692 SETD2Q9BYW2 2564 aaPredicted RBP12.03□□□□□ -0.48
NOP56-220ENST00000616692 A0A0U1RQV1 116 aa12.03□□□□□ -0.48
NOP56-220ENST00000616692 IGKV1-39P01597 117 aa12.03□□□□□ -0.48
NOP56-220ENST00000616692 PF4P02776 101 aa12.03□□□□□ -0.48
NOP56-220ENST00000616692 IGKV1D-39P04432 117 aa12.03□□□□□ -0.48
NOP56-220ENST00000616692 LGALS1P09382 135 aaKnown RBP12.03□□□□□ -0.48
NOP56-220ENST00000616692 SLC25A2Q9BXI2 301 aa12.03□□□□□ -0.48
NOP56-220ENST00000616692 PROK2Q9HC23 129 aa12.03□□□□□ -0.48
NOP56-220ENST00000616692 FAM240AA0A1B0GVK7 77 aa12.02□□□□□ -0.49
NOP56-220ENST00000616692 IFI6P09912 130 aa12.02□□□□□ -0.49
NOP56-220ENST00000616692 C16orf47Q6ZP98 133 aaPredicted RBP12.02□□□□□ -0.49
NOP56-220ENST00000616692 CYSTM1Q9H1C7 97 aa12.02□□□□□ -0.49
NOP56-220ENST00000616692 Q6ZPA2 131 aa12.02□□□□□ -0.49
NOP56-220ENST00000616692 RPUSD1Q9UJJ7 312 aaKnown RBP12.02□□□□□ -0.49
NOP56-220ENST00000616692 ABCA2Q9BZC7 2435 aa12.01□□□□□ -0.49
NOP56-220ENST00000616692 ZNF137PP52743 207 aa12.01□□□□□ -0.49
NOP56-220ENST00000616692 LINC00311Q8N616 119 aa12.01□□□□□ -0.49
NOP56-220ENST00000616692 PLEKHA3Q9HB20 300 aa12.01□□□□□ -0.49
NOP56-220ENST00000616692 Q6ZSR3 168 aa12.01□□□□□ -0.49
NOP56-220ENST00000616692 C11orf53Q8IXP5 236 aa12.01□□□□□ -0.49
NOP56-220ENST00000616692 LINC01561Q8N1V8 128 aa12.01□□□□□ -0.49
NOP56-220ENST00000616692 FAM90A23PA8MXZ1 464 aa12□□□□□ -0.49
NOP56-220ENST00000616692 H7C1H1 209 aa12□□□□□ -0.49
NOP56-220ENST00000616692 FAM90A15PP0C7V4 464 aa12□□□□□ -0.49
NOP56-220ENST00000616692 FAM90A13PP0C7W8 464 aa12□□□□□ -0.49
NOP56-220ENST00000616692 FAM90A14PP0C7W9 464 aa12□□□□□ -0.49
NOP56-220ENST00000616692 FAM90A24PP0C7X0 464 aa12□□□□□ -0.49
NOP56-220ENST00000616692 CCL1P22362 96 aa12□□□□□ -0.49
NOP56-220ENST00000616692 AAMDCQ9H7C9 122 aa12□□□□□ -0.49
NOP56-220ENST00000616692 ZMAT4Q9H898 229 aa12□□□□□ -0.49
NOP56-220ENST00000616692 NXT2Q9NPJ8 142 aaKnown RBP12□□□□□ -0.49
NOP56-220ENST00000616692 FKBP2P26885 142 aaKnown RBP12□□□□□ -0.49
NOP56-220ENST00000616692 C10orf105Q8TEF2 133 aa12□□□□□ -0.49
NOP56-220ENST00000616692 TACC2O95359 2948 aa11.99□□□□□ -0.49
NOP56-220ENST00000616692 RFPL3SP0C7P2 107 aa11.99□□□□□ -0.49
NOP56-220ENST00000616692 INTS1Q8N201 2190 aaKnown RBP11.99□□□□□ -0.49
NOP56-220ENST00000616692 PLPPR2Q96GM1 343 aa11.99□□□□□ -0.49
NOP56-220ENST00000616692 SLC25A10Q9UBX3 287 aaPredicted RBP11.99□□□□□ -0.49
NOP56-220ENST00000616692 CELSR1Q9NYQ6 3014 aa11.99□□□□□ -0.49
NOP56-220ENST00000616692 AVPP01185 164 aa11.99□□□□□ -0.49
NOP56-220ENST00000616692 CXorf67Q86X51 503 aaPredicted RBP11.99□□□□□ -0.49
NOP56-220ENST00000616692 KRTAP1-3Q8IUG1 177 aa11.99□□□□□ -0.49
NOP56-220ENST00000616692 MAPKAPK5-AS1Q8N8E1 139 aa11.99□□□□□ -0.49
NOP56-220ENST00000616692 UBE2D1P51668 147 aa11.98□□□□□ -0.49
NOP56-220ENST00000616692 SLC25A48Q6ZT89 311 aaKnown RBP11.98□□□□□ -0.49
NOP56-220ENST00000616692 GTSCR1Q86UQ5 136 aa11.98□□□□□ -0.49
NOP56-220ENST00000616692 ITPR3Q14573 2671 aa11.98□□□□□ -0.49
NOP56-220ENST00000616692 WI2-2373I1.2A0A1W2PRP0 233 aa11.98□□□□□ -0.49
NOP56-220ENST00000616692 FRG2CA6NGY1 282 aa11.98□□□□□ -0.49
NOP56-220ENST00000616692 HBDP02042 147 aa11.98□□□□□ -0.49
NOP56-220ENST00000616692 KRTAP27-1Q3LI81 207 aa11.98□□□□□ -0.49
NOP56-220ENST00000616692 SPATA3Q8NHX4 192 aa11.98□□□□□ -0.49
NOP56-220ENST00000616692 NABP2Q9BQ15 211 aa11.98□□□□□ -0.49
NOP56-220ENST00000616692 MRPL20Q9BYC9 149 aaKnown RBP11.98□□□□□ -0.49
NOP56-220ENST00000616692 TMEM167BQ9NRX6 74 aa11.98□□□□□ -0.49
NOP56-220ENST00000616692 TEX49A0A1B0GTD5 131 aa11.97□□□□□ -0.49
NOP56-220ENST00000616692 LOXL1Q08397 574 aaPredicted RBP11.97□□□□□ -0.49
NOP56-220ENST00000616692 OXLD1Q5BKU9 147 aa11.97□□□□□ -0.49
NOP56-220ENST00000616692 LINC01600Q96MT4 127 aa11.97□□□□□ -0.49
NOP56-220ENST00000616692 CLPSP04118 112 aa11.97□□□□□ -0.49
NOP56-220ENST00000616692 H3BMM0 161 aa11.96□□□□□ -0.49
NOP56-220ENST00000616692 MRPS12O15235 138 aaKnown RBP11.96□□□□□ -0.49
NOP56-220ENST00000616692 HERVK_113P61574 105 aa11.96□□□□□ -0.49
NOP56-220ENST00000616692 MIC13Q5XKP0 118 aa11.96□□□□□ -0.49
NOP56-220ENST00000616692 DRAM1Q8N682 238 aa11.96□□□□□ -0.49
NOP56-220ENST00000616692 WFDC11Q8NEX6 87 aa11.96□□□□□ -0.49
NOP56-220ENST00000616692 UBE2WQ96B02 151 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms