RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 POLEQ07864 2286 aa11.36□□□□□ -0.59
CTCFL-219ENST00000608720 NDUFS7O75251 213 aa11.36□□□□□ -0.59
CTCFL-219ENST00000608720 SRSF1Q07955 248 aaKnown RBP eCLIP11.36□□□□□ -0.59
CTCFL-219ENST00000608720 IGFL4Q6B9Z1 124 aa11.36□□□□□ -0.59
CTCFL-219ENST00000608720 C11orf71Q6IPW1 123 aa11.36□□□□□ -0.59
CTCFL-219ENST00000608720 WFDC12Q8WWY7 111 aa11.36□□□□□ -0.59
CTCFL-219ENST00000608720 MAP1LC3AQ9H492 121 aa11.36□□□□□ -0.59
CTCFL-219ENST00000608720 LINC01546A6NGU7 62 aa11.35□□□□□ -0.59
CTCFL-219ENST00000608720 E9PLD3 99 aa11.35□□□□□ -0.59
CTCFL-219ENST00000608720 HLA-DRB4P13762 266 aa11.35□□□□□ -0.59
CTCFL-219ENST00000608720 HLA-DMBP28068 263 aa11.35□□□□□ -0.59
CTCFL-219ENST00000608720 FXYD7P58549 80 aa11.35□□□□□ -0.59
CTCFL-219ENST00000608720 RNF185Q96GF1 192 aa11.35□□□□□ -0.59
CTCFL-219ENST00000608720 TM2D2Q9BX73 214 aa11.35□□□□□ -0.59
CTCFL-219ENST00000608720 HLA-DRB4X5D2U9 266 aa11.35□□□□□ -0.59
CTCFL-219ENST00000608720 CHD6Q8TD26 2715 aa11.35□□□□□ -0.59
CTCFL-219ENST00000608720 RBAKDNA6NC62 111 aa11.35□□□□□ -0.59
CTCFL-219ENST00000608720 FAM110DQ8TAY7 271 aaPredicted RBP11.35□□□□□ -0.59
CTCFL-219ENST00000608720 SELENOKQ9Y6D0 94 aa11.35□□□□□ -0.59
CTCFL-219ENST00000608720 IGSF10Q6WRI0 2623 aa11.34□□□□□ -0.59
CTCFL-219ENST00000608720 LINC01559Q495D7 138 aa11.34□□□□□ -0.59
CTCFL-219ENST00000608720 Q8N9W7 124 aa11.34□□□□□ -0.59
CTCFL-219ENST00000608720 ZNF502Q8TBZ5 544 aa11.34□□□□□ -0.59
CTCFL-219ENST00000608720 PSMG3-AS1Q96PY0 264 aa11.34□□□□□ -0.59
CTCFL-219ENST00000608720 KLK9Q2XQG4 91 aa11.33□□□□□ -0.59
CTCFL-219ENST00000608720 KLK9Q9UKQ9 250 aa11.33□□□□□ -0.59
CTCFL-219ENST00000608720 ERCC8Q13216 396 aa11.33□□□□□ -0.6
CTCFL-219ENST00000608720 PCP2Q8IVA1 136 aa11.33□□□□□ -0.6
CTCFL-219ENST00000608720 NXT2Q9NPJ8 142 aaKnown RBP11.33□□□□□ -0.6
CTCFL-219ENST00000608720 MSRB1Q9NZV6 116 aa11.33□□□□□ -0.6
CTCFL-219ENST00000608720 BUB3O43684 328 aa11.32□□□□□ -0.6
CTCFL-219ENST00000608720 FXYD2P54710 66 aa11.32□□□□□ -0.6
CTCFL-219ENST00000608720 C15orf32Q32M92 178 aa11.32□□□□□ -0.6
CTCFL-219ENST00000608720 SLC50A1Q9BRV3 221 aa11.32□□□□□ -0.6
CTCFL-219ENST00000608720 IGHV3-35A0A0C4DH35 117 aa11.32□□□□□ -0.6
CTCFL-219ENST00000608720 FCER1GP30273 86 aa11.32□□□□□ -0.6
CTCFL-219ENST00000608720 NMUP48645 174 aa11.32□□□□□ -0.6
CTCFL-219ENST00000608720 Q5PR19 223 aa11.32□□□□□ -0.6
CTCFL-219ENST00000608720 LCNL1Q6ZST4 164 aa11.32□□□□□ -0.6
CTCFL-219ENST00000608720 SPAG8Q99932 426 aaPredicted RBP11.32□□□□□ -0.6
CTCFL-219ENST00000608720 ZMAT4Q9H898 229 aa11.32□□□□□ -0.6
CTCFL-219ENST00000608720 ZFAND3Q9H8U3 227 aa11.32□□□□□ -0.6
CTCFL-219ENST00000608720 IGHV3OR16-8A0A075B7F1 116 aa11.31□□□□□ -0.6
CTCFL-219ENST00000608720 TRAV26-1A0A087WT03 109 aa11.31□□□□□ -0.6
CTCFL-219ENST00000608720 PRAC2D3DTV9 90 aa11.31□□□□□ -0.6
CTCFL-219ENST00000608720 TNFRSF6BO95407 300 aa11.31□□□□□ -0.6
CTCFL-219ENST00000608720 CLEC3BP05452 202 aa11.31□□□□□ -0.6
CTCFL-219ENST00000608720 ZFP36P26651 326 aaKnown RBP11.31□□□□□ -0.6
CTCFL-219ENST00000608720 CRYBA4P53673 196 aa11.31□□□□□ -0.6
CTCFL-219ENST00000608720 CDSNQ15517 529 aa11.31□□□□□ -0.6
CTCFL-219ENST00000608720 TAL2Q16559 108 aa11.31□□□□□ -0.6
CTCFL-219ENST00000608720 SIRPDQ9H106 197 aa11.31□□□□□ -0.6
CTCFL-219ENST00000608720 TLN1Q9Y490 2541 aaKnown RBP11.31□□□□□ -0.6
CTCFL-219ENST00000608720 GCSHP23434 173 aa11.31□□□□□ -0.6
CTCFL-219ENST00000608720 LEPP41159 167 aa11.31□□□□□ -0.6
CTCFL-219ENST00000608720 ADORA2A-AS1P86434 159 aa11.31□□□□□ -0.6
CTCFL-219ENST00000608720 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.31□□□□□ -0.6
CTCFL-219ENST00000608720 CHAC1Q9BUX1 264 aa11.31□□□□□ -0.6
CTCFL-219ENST00000608720 MRPL16Q9NX20 251 aaKnown RBP11.31□□□□□ -0.6
CTCFL-219ENST00000608720 DKK2Q9UBU2 259 aa11.31□□□□□ -0.6
CTCFL-219ENST00000608720 WFDC2Q14508 124 aa11.3□□□□□ -0.6
CTCFL-219ENST00000608720 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.29□□□□□ -0.6
CTCFL-219ENST00000608720 ECSCRQ19T08 205 aa11.29□□□□□ -0.6
CTCFL-219ENST00000608720 IL17RELQ6ZVW7 336 aa11.29□□□□□ -0.6
CTCFL-219ENST00000608720 CEND1Q8N111 149 aa11.29□□□□□ -0.6
CTCFL-219ENST00000608720 CFAP46Q8IYW2 2715 aa11.29□□□□□ -0.6
CTCFL-219ENST00000608720 IGLL5B9A064 214 aa11.29□□□□□ -0.6
CTCFL-219ENST00000608720 UBE2E1P51965 193 aa11.29□□□□□ -0.6
CTCFL-219ENST00000608720 DTX2Q86UW9 622 aa11.29□□□□□ -0.6
CTCFL-219ENST00000608720 WFDC3Q8IUB2 231 aa11.29□□□□□ -0.6
CTCFL-219ENST00000608720 RNF182Q8N6D2 247 aa11.29□□□□□ -0.6
CTCFL-219ENST00000608720 C18orf15Q96N68 181 aa11.29□□□□□ -0.6
CTCFL-219ENST00000608720 SPTA1P02549 2419 aa11.29□□□□□ -0.6
CTCFL-219ENST00000608720 EVI2AP22794 236 aa11.28□□□□□ -0.6
CTCFL-219ENST00000608720 ATP6V0E2Q8NHE4 81 aa11.28□□□□□ -0.6
CTCFL-219ENST00000608720 MRPL53Q96EL3 112 aaKnown RBP11.28□□□□□ -0.6
CTCFL-219ENST00000608720 AGPAT4-IT1Q9H0P7 198 aa11.28□□□□□ -0.6
CTCFL-219ENST00000608720 GEMIN7Q9H840 131 aaKnown RBP11.28□□□□□ -0.6
CTCFL-219ENST00000608720 ANKHD1Q8IWZ3 2542 aaKnown RBP11.28□□□□□ -0.6
CTCFL-219ENST00000608720 IGKV3D-20A0A0C4DH25 116 aa11.28□□□□□ -0.6
CTCFL-219ENST00000608720 CLPSL1A2RUU4 121 aa11.28□□□□□ -0.6
CTCFL-219ENST00000608720 ATP6V0E1O15342 81 aa11.28□□□□□ -0.6
CTCFL-219ENST00000608720 GAS8-AS1O95177 125 aa11.28□□□□□ -0.6
CTCFL-219ENST00000608720 TCTAP57738 103 aa11.28□□□□□ -0.6
CTCFL-219ENST00000608720 Q8N8P6 123 aa11.28□□□□□ -0.6
CTCFL-219ENST00000608720 HIF1ANQ9NWT6 349 aa11.28□□□□□ -0.6
CTCFL-219ENST00000608720 PRO0461Q9UI25 63 aa11.28□□□□□ -0.6
CTCFL-219ENST00000608720 NBASA2RRP1 2371 aa11.27□□□□□ -0.6
CTCFL-219ENST00000608720 ARHGAP32A7KAX9 2087 aa11.27□□□□□ -0.6
CTCFL-219ENST00000608720 PRSS1P07477 247 aa11.27□□□□□ -0.61
CTCFL-219ENST00000608720 PPIFP30405 207 aaKnown RBP11.27□□□□□ -0.61
CTCFL-219ENST00000608720 ODF1Q14990 250 aa11.27□□□□□ -0.61
CTCFL-219ENST00000608720 TMEM78Q5T7P6 136 aa11.27□□□□□ -0.61
CTCFL-219ENST00000608720 ZNF418Q8TF45 676 aaPredicted RBP11.27□□□□□ -0.61
CTCFL-219ENST00000608720 EEF1AKMT3Q96AZ1 226 aa11.27□□□□□ -0.61
CTCFL-219ENST00000608720 HHLA3Q9XRX5 114 aa11.27□□□□□ -0.61
CTCFL-219ENST00000608720 ATP5LO75964 103 aa11.27□□□□□ -0.61
CTCFL-219ENST00000608720 GAGE13Q4V321 117 aa11.27□□□□□ -0.61
CTCFL-219ENST00000608720 CLEC19AQ6UXS0 136 aa11.27□□□□□ -0.61
CTCFL-219ENST00000608720 AJUBAQ96IF1 538 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms