RNA–Protein interactions for RNA: ENST00000604423.1

SRGAP2-211, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 1 (best)

Gene SRGAP2, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-211ENST00000604423 RAB1BQ9H0U4 201 aa5.01□□□□□ -1.61
SRGAP2-211ENST00000604423 FBXL15Q9H469 300 aa5.01□□□□□ -1.61
SRGAP2-211ENST00000604423 MSRB1Q9NZV6 116 aa5.01□□□□□ -1.61
SRGAP2-211ENST00000604423 GAGE2DQ9UEU5 116 aa5.01□□□□□ -1.61
SRGAP2-211ENST00000604423 SIGLEC9Q9Y336 463 aa5.01□□□□□ -1.61
SRGAP2-211ENST00000604423 FREM2Q5SZK8 3169 aa5□□□□□ -1.61
SRGAP2-211ENST00000604423 PLXNB1O43157 2135 aa5□□□□□ -1.61
SRGAP2-211ENST00000604423 IGLV3-9A0A075B6K5 115 aa5□□□□□ -1.61
SRGAP2-211ENST00000604423 TRAV8-2A0A0B4J237 113 aa5□□□□□ -1.61
SRGAP2-211ENST00000604423 TRBV7-9A0A0J9YWB2 115 aa5□□□□□ -1.61
SRGAP2-211ENST00000604423 FABP5P3A8MUU1 101 aa5□□□□□ -1.61
SRGAP2-211ENST00000604423 PATE3B3GLJ2 98 aa5□□□□□ -1.61
SRGAP2-211ENST00000604423 TEX22C9J3V5 150 aa5□□□□□ -1.61
SRGAP2-211ENST00000604423 SCGB2A1O75556 95 aa5□□□□□ -1.61
SRGAP2-211ENST00000604423 GAS8-AS1O95177 125 aa5□□□□□ -1.61
SRGAP2-211ENST00000604423 GATA1P15976 413 aaPredicted RBP5□□□□□ -1.61
SRGAP2-211ENST00000604423 RPL7P18124 248 aaKnown RBP5□□□□□ -1.61
SRGAP2-211ENST00000604423 CNTFRP26992 372 aa5□□□□□ -1.61
SRGAP2-211ENST00000604423 EFNA4P52798 201 aa5□□□□□ -1.61
SRGAP2-211ENST00000604423 COX8CQ7Z4L0 72 aa5□□□□□ -1.61
SRGAP2-211ENST00000604423 DTX2Q86UW9 622 aa5□□□□□ -1.61
SRGAP2-211ENST00000604423 ANKRD29Q8N6D5 301 aa5□□□□□ -1.61
SRGAP2-211ENST00000604423 ZNF491Q8N8L2 437 aa5□□□□□ -1.61
SRGAP2-211ENST00000604423 TMEM105Q8N8V8 129 aa5□□□□□ -1.61
SRGAP2-211ENST00000604423 FAM110AQ9BQ89 295 aa5□□□□□ -1.61
SRGAP2-211ENST00000604423 GAGE12JA6NER3 117 aa4.99□□□□□ -1.61
SRGAP2-211ENST00000604423 MRPS12O15235 138 aaKnown RBP4.99□□□□□ -1.61
SRGAP2-211ENST00000604423 GAGE7O76087 117 aa4.99□□□□□ -1.61
SRGAP2-211ENST00000604423 TGFAP01135 160 aa4.99□□□□□ -1.61
SRGAP2-211ENST00000604423 GAGE12FP0CL80 117 aa4.99□□□□□ -1.61
SRGAP2-211ENST00000604423 GAGE12GP0CL81 117 aa4.99□□□□□ -1.61
SRGAP2-211ENST00000604423 GAGE12IP0CL82 117 aa4.99□□□□□ -1.61
SRGAP2-211ENST00000604423 WT1P19544 449 aaPredicted RBP4.99□□□□□ -1.61
SRGAP2-211ENST00000604423 ASIPP42127 132 aa4.99□□□□□ -1.61
SRGAP2-211ENST00000604423 UBE2D3P61077 147 aa4.99□□□□□ -1.61
SRGAP2-211ENST00000604423 HERVK_113P61574 105 aa4.99□□□□□ -1.61
SRGAP2-211ENST00000604423 UBE2D2P62837 147 aa4.99□□□□□ -1.61
SRGAP2-211ENST00000604423 GAGE4Q13068 117 aa4.99□□□□□ -1.61
SRGAP2-211ENST00000604423 MRGPRG-AS1Q2M3A8 158 aa4.99□□□□□ -1.61
SRGAP2-211ENST00000604423 ORMDL2Q53FV1 153 aa4.99□□□□□ -1.61
SRGAP2-211ENST00000604423 CARD19Q96LW7 228 aa4.99□□□□□ -1.61
SRGAP2-211ENST00000604423 SCGB3A1Q96QR1 104 aa4.99□□□□□ -1.61
SRGAP2-211ENST00000604423 VKORC1Q9BQB6 163 aa4.99□□□□□ -1.61
SRGAP2-211ENST00000604423 PRADC1Q9BSG0 188 aa4.99□□□□□ -1.61
SRGAP2-211ENST00000604423 MED13Q9UHV7 2174 aa4.99□□□□□ -1.61
SRGAP2-211ENST00000604423 IGLV2-18A0A075B6J9 118 aa4.99□□□□□ -1.61
SRGAP2-211ENST00000604423 FAM90A27PA6NNH2 459 aa4.99□□□□□ -1.61
SRGAP2-211ENST00000604423 TCL1BO95988 128 aa4.99□□□□□ -1.61
SRGAP2-211ENST00000604423 IFITM1P13164 125 aa4.99□□□□□ -1.61
SRGAP2-211ENST00000604423 ARL3P36405 182 aa4.99□□□□□ -1.61
SRGAP2-211ENST00000604423 ZNF80P51504 273 aaPredicted RBP4.99□□□□□ -1.61
SRGAP2-211ENST00000604423 UBE2D1P51668 147 aa4.99□□□□□ -1.61
SRGAP2-211ENST00000604423 NDUFV3P56181 108 aaKnown RBP4.99□□□□□ -1.61
SRGAP2-211ENST00000604423 HERV-K104P63124 156 aa4.99□□□□□ -1.61
SRGAP2-211ENST00000604423 ZFP2Q6ZN57 461 aa4.99□□□□□ -1.61
SRGAP2-211ENST00000604423 ASCL5Q7RTU5 278 aa4.99□□□□□ -1.61
SRGAP2-211ENST00000604423 KIR2DL4Q99706 377 aa4.99□□□□□ -1.61
SRGAP2-211ENST00000604423 SRSF8Q9BRL6 282 aaKnown RBP4.99□□□□□ -1.61
SRGAP2-211ENST00000604423 KLK15Q9H2R5 256 aa4.99□□□□□ -1.61
SRGAP2-211ENST00000604423 SPANXA1Q9NS26 97 aa4.99□□□□□ -1.61
SRGAP2-211ENST00000604423 SVILO95425 2214 aa4.98□□□□□ -1.61
SRGAP2-211ENST00000604423 TRAV26-2A0A0B4J265 109 aa4.98□□□□□ -1.61
SRGAP2-211ENST00000604423 RHODO00212 210 aa4.98□□□□□ -1.61
SRGAP2-211ENST00000604423 IGHG3P01860 377 aa4.98□□□□□ -1.61
SRGAP2-211ENST00000604423 SLC25A16P16260 332 aa4.98□□□□□ -1.61
SRGAP2-211ENST00000604423 SRD5A1P18405 259 aa4.98□□□□□ -1.61
SRGAP2-211ENST00000604423 PRTN3P24158 256 aa4.98□□□□□ -1.61
SRGAP2-211ENST00000604423 RPL32P62910 135 aaKnown RBP4.98□□□□□ -1.61
SRGAP2-211ENST00000604423 CCL8P80075 99 aa4.98□□□□□ -1.61
SRGAP2-211ENST00000604423 SPANXN1Q5VSR9 72 aa4.98□□□□□ -1.61
SRGAP2-211ENST00000604423 SMIM20Q8N5G0 67 aa4.98□□□□□ -1.61
SRGAP2-211ENST00000604423 CITED1Q99966 193 aa4.98□□□□□ -1.61
SRGAP2-211ENST00000604423 COL27A1Q8IZC6 1860 aaPredicted RBP4.98□□□□□ -1.61
SRGAP2-211ENST00000604423 INTS1Q8N201 2190 aaKnown RBP4.98□□□□□ -1.61
SRGAP2-211ENST00000604423 K7EIM0 57 aa4.97□□□□□ -1.61
SRGAP2-211ENST00000604423 SLC25A20O43772 301 aa4.97□□□□□ -1.61
SRGAP2-211ENST00000604423 TRGV3P03979 118 aa4.97□□□□□ -1.61
SRGAP2-211ENST00000604423 CLEC3BP05452 202 aa4.97□□□□□ -1.61
SRGAP2-211ENST00000604423 CRYGBP07316 175 aa4.97□□□□□ -1.61
SRGAP2-211ENST00000604423 IGHV1-8P0DP01 117 aa4.97□□□□□ -1.61
SRGAP2-211ENST00000604423 IL17RELQ6ZVW7 336 aa4.97□□□□□ -1.61
SRGAP2-211ENST00000604423 NDUFA11Q86Y39 141 aa4.97□□□□□ -1.61
SRGAP2-211ENST00000604423 RAX2Q96IS3 184 aa4.97□□□□□ -1.61
SRGAP2-211ENST00000604423 SMIM2Q9BVW6 85 aa4.97□□□□□ -1.61
SRGAP2-211ENST00000604423 ONECUT1Q9UBC0 465 aa4.97□□□□□ -1.61
SRGAP2-211ENST00000604423 CACNA1GO43497 2377 aa4.97□□□□□ -1.61
SRGAP2-211ENST00000604423 IGHV1-3A0A0C4DH29 117 aa4.97□□□□□ -1.61
SRGAP2-211ENST00000604423 C9JAW5 83 aa4.97□□□□□ -1.61
SRGAP2-211ENST00000604423 FCN3O75636 299 aa4.97□□□□□ -1.61
SRGAP2-211ENST00000604423 MFAP4P55083 255 aa4.97□□□□□ -1.61
SRGAP2-211ENST00000604423 KRTAP10-2P60368 255 aa4.97□□□□□ -1.61
SRGAP2-211ENST00000604423 C3orf36Q3SXR2 165 aa4.97□□□□□ -1.61
SRGAP2-211ENST00000604423 SBSPONQ8IVN8 264 aa4.97□□□□□ -1.61
SRGAP2-211ENST00000604423 TDHQ8IZJ6 230 aa4.97□□□□□ -1.61
SRGAP2-211ENST00000604423 NRACQ8N912 160 aa4.97□□□□□ -1.61
SRGAP2-211ENST00000604423 MAFAQ8NHW3 353 aaPredicted RBP4.97□□□□□ -1.61
SRGAP2-211ENST00000604423 KRTAP9-3Q9BYQ3 159 aa4.97□□□□□ -1.61
SRGAP2-211ENST00000604423 S4R3C0 116 aa4.97□□□□□ -1.61
SRGAP2-211ENST00000604423 URB1O60287 2271 aaKnown RBP4.96□□□□□ -1.61
SRGAP2-211ENST00000604423 FRYLO94915 3013 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms