RNA–Protein interactions for RNA: ENST00000603043.1

CDCA3-211, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 1,995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-211ENST00000603043 HLA-DRB4X5D2U9 266 aa11.46□□□□□ -0.58
CDCA3-211ENST00000603043 F6UB75 175 aa11.45□□□□□ -0.58
CDCA3-211ENST00000603043 H3BMM0 161 aa11.45□□□□□ -0.58
CDCA3-211ENST00000603043 UBE2L3P68036 154 aaKnown RBP11.45□□□□□ -0.58
CDCA3-211ENST00000603043 PSG3Q16557 428 aa11.45□□□□□ -0.58
CDCA3-211ENST00000603043 EBLN2Q6P2I7 272 aa11.45□□□□□ -0.58
CDCA3-211ENST00000603043 FXYD5Q96DB9 178 aa11.45□□□□□ -0.58
CDCA3-211ENST00000603043 ZMAT4Q9H898 229 aa11.45□□□□□ -0.58
CDCA3-211ENST00000603043 A0A1B0GV50 99 aa11.45□□□□□ -0.58
CDCA3-211ENST00000603043 HMGB3O15347 200 aaKnown RBP11.45□□□□□ -0.58
CDCA3-211ENST00000603043 NBEAP1P0C6P0 100 aa11.45□□□□□ -0.58
CDCA3-211ENST00000603043 CEBPGP53567 150 aa11.45□□□□□ -0.58
CDCA3-211ENST00000603043 CCL20P78556 96 aa11.45□□□□□ -0.58
CDCA3-211ENST00000603043 PQLC2Q6ZP29 291 aa11.45□□□□□ -0.58
CDCA3-211ENST00000603043 SPATA25Q9BR10 227 aa11.45□□□□□ -0.58
CDCA3-211ENST00000603043 CSTL1Q9H114 145 aa11.45□□□□□ -0.58
CDCA3-211ENST00000603043 TENM3Q9P273 2699 aa11.44□□□□□ -0.58
CDCA3-211ENST00000603043 A0A0J9YX75 114 aa11.44□□□□□ -0.58
CDCA3-211ENST00000603043 LOC102723971A0A1B0GUV8 181 aa11.44□□□□□ -0.58
CDCA3-211ENST00000603043 NDUFB4O95168 129 aa11.44□□□□□ -0.58
CDCA3-211ENST00000603043 PSG9Q00887 426 aa11.44□□□□□ -0.58
CDCA3-211ENST00000603043 SAPCD1Q5SSQ6 148 aa11.44□□□□□ -0.58
CDCA3-211ENST00000603043 PYGO2Q9BRQ0 406 aa11.44□□□□□ -0.58
CDCA3-211ENST00000603043 CLEC5AQ9NY25 188 aa11.44□□□□□ -0.58
CDCA3-211ENST00000603043 TRAV1-1A0A0B4J248 108 aa11.43□□□□□ -0.58
CDCA3-211ENST00000603043 XKRY2A2RUG3 117 aa11.43□□□□□ -0.58
CDCA3-211ENST00000603043 CA1P00915 261 aaPredicted RBP11.43□□□□□ -0.58
CDCA3-211ENST00000603043 STAG3L2P0CL84 134 aa11.43□□□□□ -0.58
CDCA3-211ENST00000603043 STAG3L3P0CL85 134 aa11.43□□□□□ -0.58
CDCA3-211ENST00000603043 ARL14EPLP0DKL9 152 aa11.43□□□□□ -0.58
CDCA3-211ENST00000603043 OR4B1Q8NGF8 309 aa11.43□□□□□ -0.58
CDCA3-211ENST00000603043 RPUSD4Q96CM3 377 aaKnown RBP11.43□□□□□ -0.58
CDCA3-211ENST00000603043 AAMDCQ9H7C9 122 aa11.43□□□□□ -0.58
CDCA3-211ENST00000603043 RETNQ9HD89 108 aa11.43□□□□□ -0.58
CDCA3-211ENST00000603043 ZNF705FA8MVS1 300 aaPredicted RBP11.42□□□□□ -0.58
CDCA3-211ENST00000603043 IGKV3-20P01619 116 aa11.42□□□□□ -0.58
CDCA3-211ENST00000603043 DEFB135Q30KP9 77 aa11.42□□□□□ -0.58
CDCA3-211ENST00000603043 MORN3Q6PF18 240 aaPredicted RBP11.42□□□□□ -0.58
CDCA3-211ENST00000603043 Q6ZWC4 215 aa11.42□□□□□ -0.58
CDCA3-211ENST00000603043 NPSP0C0P6 89 aa11.41□□□□□ -0.58
CDCA3-211ENST00000603043 ZNF705DP0CH99 300 aaPredicted RBP11.41□□□□□ -0.58
CDCA3-211ENST00000603043 ZNF705BP0CI00 300 aaPredicted RBP11.41□□□□□ -0.58
CDCA3-211ENST00000603043 SSX7Q7RTT5 188 aa11.41□□□□□ -0.58
CDCA3-211ENST00000603043 EXOC3-AS1Q8N2X6 119 aa11.41□□□□□ -0.58
CDCA3-211ENST00000603043 SDF2L1Q9HCN8 221 aa11.41□□□□□ -0.58
CDCA3-211ENST00000603043 CTXND1A0A1B0GTU2 59 aa11.41□□□□□ -0.58
CDCA3-211ENST00000603043 PRB4P10163 310 aaPredicted RBP11.41□□□□□ -0.58
CDCA3-211ENST00000603043 CNN1P51911 297 aaKnown RBP11.41□□□□□ -0.58
CDCA3-211ENST00000603043 FAM3BP58499 235 aaPredicted RBP11.41□□□□□ -0.58
CDCA3-211ENST00000603043 ZNF726P1Q15940 193 aa11.41□□□□□ -0.58
CDCA3-211ENST00000603043 OR8A1Q8NGG7 326 aa11.41□□□□□ -0.58
CDCA3-211ENST00000603043 CLUHP3Q96NS8 147 aa11.41□□□□□ -0.58
CDCA3-211ENST00000603043 RCHY1Q96PM5 261 aa11.41□□□□□ -0.58
CDCA3-211ENST00000603043 STAB2Q8WWQ8 2551 aa11.4□□□□□ -0.58
CDCA3-211ENST00000603043 M0R3E3 92 aa11.4□□□□□ -0.58
CDCA3-211ENST00000603043 DUSP14O95147 198 aaKnown RBP11.4□□□□□ -0.58
CDCA3-211ENST00000603043 CXorf1O96002 111 aa11.4□□□□□ -0.58
CDCA3-211ENST00000603043 RANP62826 216 aaKnown RBP11.4□□□□□ -0.58
CDCA3-211ENST00000603043 HIST1H1AQ02539 215 aaPredicted RBP11.4□□□□□ -0.58
CDCA3-211ENST00000603043 MRPL53Q96EL3 112 aaKnown RBP11.4□□□□□ -0.58
CDCA3-211ENST00000603043 U3KQK5 164 aa11.4□□□□□ -0.58
CDCA3-211ENST00000603043 HUWE1Q7Z6Z7 4374 aaKnown RBP11.4□□□□□ -0.59
CDCA3-211ENST00000603043 GIG44P09565 113 aaPredicted RBP11.39□□□□□ -0.59
CDCA3-211ENST00000603043 LYPD1Q8N2G4 141 aa11.39□□□□□ -0.59
CDCA3-211ENST00000603043 PRAC2D3DTV9 90 aa11.39□□□□□ -0.59
CDCA3-211ENST00000603043 GCHFRP30047 84 aa11.39□□□□□ -0.59
CDCA3-211ENST00000603043 PMS2P11Q13670 270 aa11.39□□□□□ -0.59
CDCA3-211ENST00000603043 Q9H3A6 140 aa11.39□□□□□ -0.59
CDCA3-211ENST00000603043 A8MTW9 85 aa11.38□□□□□ -0.59
CDCA3-211ENST00000603043 SPRY2O43597 315 aa11.38□□□□□ -0.59
CDCA3-211ENST00000603043 PFN1P07737 140 aaKnown RBP11.38□□□□□ -0.59
CDCA3-211ENST00000603043 TMEM241Q24JQ0 296 aa11.38□□□□□ -0.59
CDCA3-211ENST00000603043 OR10J6PQ8NGY7 276 aa11.38□□□□□ -0.59
CDCA3-211ENST00000603043 RNF183Q96D59 192 aa11.38□□□□□ -0.59
CDCA3-211ENST00000603043 C20orf144Q9BQM9 153 aa11.38□□□□□ -0.59
CDCA3-211ENST00000603043 OVOL2Q9BRP0 275 aa11.38□□□□□ -0.59
CDCA3-211ENST00000603043 NAGKQ9UJ70 344 aa11.38□□□□□ -0.59
CDCA3-211ENST00000603043 TP53TG1Q9Y2A0 90 aa11.38□□□□□ -0.59
CDCA3-211ENST00000603043 FXYD7P58549 80 aa11.37□□□□□ -0.59
CDCA3-211ENST00000603043 C1QTNF4Q9BXJ3 329 aa11.37□□□□□ -0.59
CDCA3-211ENST00000603043 XCL2Q9UBD3 114 aa11.37□□□□□ -0.59
CDCA3-211ENST00000603043 MAP1LC3B2A6NCE7 125 aa11.37□□□□□ -0.59
CDCA3-211ENST00000603043 SCGB1D1O95968 90 aa11.37□□□□□ -0.59
CDCA3-211ENST00000603043 BCL2P10415 239 aa11.37□□□□□ -0.59
CDCA3-211ENST00000603043 AMTNQ6UX39 209 aa11.37□□□□□ -0.59
CDCA3-211ENST00000603043 IMMP2LQ96T52 175 aa11.37□□□□□ -0.59
CDCA3-211ENST00000603043 MAP1LC3BQ9GZQ8 125 aa11.37□□□□□ -0.59
CDCA3-211ENST00000603043 TMEM167BQ9NRX6 74 aa11.37□□□□□ -0.59
CDCA3-211ENST00000603043 NAT8Q9UHE5 227 aa11.37□□□□□ -0.59
CDCA3-211ENST00000603043 IFNA1P01562 189 aa11.36□□□□□ -0.59
CDCA3-211ENST00000603043 FGF8P55075 233 aaPredicted RBP11.36□□□□□ -0.59
CDCA3-211ENST00000603043 ZNF705AQ6ZN79 300 aaPredicted RBP11.36□□□□□ -0.59
CDCA3-211ENST00000603043 BTF3L4Q96K17 158 aa11.36□□□□□ -0.59
CDCA3-211ENST00000603043 MIEN1Q9BRT3 115 aa11.36□□□□□ -0.59
CDCA3-211ENST00000603043 OTORQ9NRC9 128 aa11.36□□□□□ -0.59
CDCA3-211ENST00000603043 TYMSP04818 313 aa11.36□□□□□ -0.59
CDCA3-211ENST00000603043 DMRTA1Q5VZB9 504 aa11.36□□□□□ -0.59
CDCA3-211ENST00000603043 CSN1S1P47710 185 aa11.35□□□□□ -0.59
CDCA3-211ENST00000603043 ZFP30Q9Y2G7 519 aa11.35□□□□□ -0.59
CDCA3-211ENST00000603043 A0A1W2PPQ1 181 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms