RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 K7ESM1 405 aa3.8□□□□□ -1.8
SPTBN1-206ENST00000602898 NPYP01303 97 aa3.8□□□□□ -1.8
SPTBN1-206ENST00000602898 COX6A1P12074 109 aa3.8□□□□□ -1.8
SPTBN1-206ENST00000602898 SRSF9Q13242 221 aaKnown RBP eCLIP3.8□□□□□ -1.8
SPTBN1-206ENST00000602898 GDF5OSQ5U4N7 250 aa3.8□□□□□ -1.8
SPTBN1-206ENST00000602898 PDPNQ86YL7 162 aa3.8□□□□□ -1.8
SPTBN1-206ENST00000602898 DSCR8Q96T75 97 aa3.8□□□□□ -1.8
SPTBN1-206ENST00000602898 SLC25A2Q9BXI2 301 aa3.8□□□□□ -1.8
SPTBN1-206ENST00000602898 FGF22Q9HCT0 170 aa3.8□□□□□ -1.8
SPTBN1-206ENST00000602898 COL6A3P12111 3177 aa3.8□□□□□ -1.8
SPTBN1-206ENST00000602898 LGALS9O00182 355 aa3.8□□□□□ -1.8
SPTBN1-206ENST00000602898 ATOX1O00244 68 aa3.8□□□□□ -1.8
SPTBN1-206ENST00000602898 MGST3O14880 152 aa3.8□□□□□ -1.8
SPTBN1-206ENST00000602898 PYYP10082 97 aa3.8□□□□□ -1.8
SPTBN1-206ENST00000602898 FXYD4P59646 89 aa3.8□□□□□ -1.8
SPTBN1-206ENST00000602898 HOXA4Q00056 320 aaPredicted RBP3.8□□□□□ -1.8
SPTBN1-206ENST00000602898 C17orf77Q96MU5 243 aa3.8□□□□□ -1.8
SPTBN1-206ENST00000602898 LINC00527Q9UJ94 153 aa3.8□□□□□ -1.8
SPTBN1-206ENST00000602898 TRAV12-2A0A075B6T6 113 aa3.79□□□□□ -1.8
SPTBN1-206ENST00000602898 TRAV17A0A0B4J275 112 aa3.79□□□□□ -1.8
SPTBN1-206ENST00000602898 hADV29S1A0JD25 119 aa3.79□□□□□ -1.8
SPTBN1-206ENST00000602898 LINC01548A6NM66 108 aa3.79□□□□□ -1.8
SPTBN1-206ENST00000602898 A8MUN3 132 aa3.79□□□□□ -1.8
SPTBN1-206ENST00000602898 TCL1BO95988 128 aa3.79□□□□□ -1.8
SPTBN1-206ENST00000602898 CXCL5P42830 114 aa3.79□□□□□ -1.8
SPTBN1-206ENST00000602898 EFNA4P52798 201 aa3.79□□□□□ -1.8
SPTBN1-206ENST00000602898 ZNF816Q0VGE8 651 aaPredicted RBP3.79□□□□□ -1.8
SPTBN1-206ENST00000602898 HDHD3Q9BSH5 251 aaPredicted RBP3.79□□□□□ -1.8
SPTBN1-206ENST00000602898 PSENENQ9NZ42 101 aa3.79□□□□□ -1.8
SPTBN1-206ENST00000602898 SPRR3Q9UBC9 169 aa3.79□□□□□ -1.8
SPTBN1-206ENST00000602898 PIEZO1Q92508 2521 aa3.79□□□□□ -1.8
SPTBN1-206ENST00000602898 TRAV41A0A0B4J266 112 aa3.79□□□□□ -1.8
SPTBN1-206ENST00000602898 A0A0J9YXV3 536 aa3.79□□□□□ -1.8
SPTBN1-206ENST00000602898 SLC25A20O43772 301 aa3.79□□□□□ -1.8
SPTBN1-206ENST00000602898 LTAP01374 205 aa3.79□□□□□ -1.8
SPTBN1-206ENST00000602898 PLA2G2AP14555 144 aa3.79□□□□□ -1.8
SPTBN1-206ENST00000602898 COL8A2P25067 703 aa3.79□□□□□ -1.8
SPTBN1-206ENST00000602898 LOXL1Q08397 574 aaPredicted RBP3.79□□□□□ -1.8
SPTBN1-206ENST00000602898 CCL14Q16627 93 aa3.79□□□□□ -1.8
SPTBN1-206ENST00000602898 WWC2-AS2Q96NR7 200 aa3.79□□□□□ -1.8
SPTBN1-206ENST00000602898 TRBV7-3A0A075B6L6 115 aa3.78□□□□□ -1.8
SPTBN1-206ENST00000602898 IGHV3OR15-7A0A075B7D8 119 aa3.78□□□□□ -1.8
SPTBN1-206ENST00000602898 LOC389332A0A1B0GUA5 103 aa3.78□□□□□ -1.8
SPTBN1-206ENST00000602898 C19orf71A6NCJ1 209 aa3.78□□□□□ -1.8
SPTBN1-206ENST00000602898 CISD3P0C7P0 127 aa3.78□□□□□ -1.8
SPTBN1-206ENST00000602898 RPRMLQ8N4K4 120 aa3.78□□□□□ -1.8
SPTBN1-206ENST00000602898 TRGV9Q99603 122 aa3.78□□□□□ -1.8
SPTBN1-206ENST00000602898 DPH3P1Q9H4G8 78 aa3.78□□□□□ -1.8
SPTBN1-206ENST00000602898 C16orf95Q9H693 158 aa3.78□□□□□ -1.8
SPTBN1-206ENST00000602898 RAI1Q7Z5J4 1906 aaPredicted RBP3.78□□□□□ -1.8
SPTBN1-206ENST00000602898 TMSB15BA0A087X1C1 80 aa3.78□□□□□ -1.8
SPTBN1-206ENST00000602898 H3BVH4 76 aa3.78□□□□□ -1.8
SPTBN1-206ENST00000602898 SYNGR2O43760 224 aa3.78□□□□□ -1.8
SPTBN1-206ENST00000602898 LINC00313P59037 77 aa3.78□□□□□ -1.8
SPTBN1-206ENST00000602898 HIST1H4AP62805 103 aaKnown RBP3.78□□□□□ -1.8
SPTBN1-206ENST00000602898 HBBP68871 147 aa3.78□□□□□ -1.8
SPTBN1-206ENST00000602898 FXYD3Q14802 87 aa3.78□□□□□ -1.8
SPTBN1-206ENST00000602898 TMEM170BQ5T4T1 132 aa3.78□□□□□ -1.8
SPTBN1-206ENST00000602898 MKXQ8IYA7 352 aa3.78□□□□□ -1.8
SPTBN1-206ENST00000602898 MGST2Q99735 147 aa3.78□□□□□ -1.8
SPTBN1-206ENST00000602898 NPCDR1Q9BY65 106 aa3.78□□□□□ -1.8
SPTBN1-206ENST00000602898 SERP1Q9Y6X1 66 aa3.78□□□□□ -1.8
SPTBN1-206ENST00000602898 THADAQ6YHU6 1953 aa3.78□□□□□ -1.8
SPTBN1-206ENST00000602898 CD52P31358 61 aa3.77□□□□□ -1.81
SPTBN1-206ENST00000602898 MP68P56378 58 aa3.77□□□□□ -1.81
SPTBN1-206ENST00000602898 NPC2P61916 151 aa3.77□□□□□ -1.81
SPTBN1-206ENST00000602898 PRR3P79522 188 aaKnown RBP3.77□□□□□ -1.81
SPTBN1-206ENST00000602898 ZNF56Q15929 161 aa3.77□□□□□ -1.81
SPTBN1-206ENST00000602898 RUSC1-AS1Q66K80 236 aa3.77□□□□□ -1.81
SPTBN1-206ENST00000602898 ZNF414Q96IQ9 312 aa3.77□□□□□ -1.81
SPTBN1-206ENST00000602898 TM2D3Q9BRN9 247 aa3.77□□□□□ -1.81
SPTBN1-206ENST00000602898 SRXN1Q9BYN0 137 aa3.77□□□□□ -1.81
SPTBN1-206ENST00000602898 NXT2Q9NPJ8 142 aaKnown RBP3.77□□□□□ -1.81
SPTBN1-206ENST00000602898 ALPK2Q86TB3 2170 aa3.77□□□□□ -1.81
SPTBN1-206ENST00000602898 GOLGA4Q13439 2230 aaKnown RBP3.77□□□□□ -1.81
SPTBN1-206ENST00000602898 IGKV1-27A0A075B6S5 117 aa3.77□□□□□ -1.81
SPTBN1-206ENST00000602898 IGHV1-69DA0A0B4J2H0 117 aa3.77□□□□□ -1.81
SPTBN1-206ENST00000602898 ATP6V0E1O15342 81 aa3.77□□□□□ -1.81
SPTBN1-206ENST00000602898 ACYP1P07311 99 aa3.77□□□□□ -1.81
SPTBN1-206ENST00000602898 IFI6P09912 130 aa3.77□□□□□ -1.81
SPTBN1-206ENST00000602898 HMGA1P17096 107 aaKnown RBP3.77□□□□□ -1.81
SPTBN1-206ENST00000602898 TMEM155Q4W5P6 130 aa3.77□□□□□ -1.81
SPTBN1-206ENST00000602898 CEMP1Q6PRD7 247 aaPredicted RBP3.77□□□□□ -1.81
SPTBN1-206ENST00000602898 HIST1H4GQ99525 98 aa3.77□□□□□ -1.81
SPTBN1-206ENST00000602898 LOC107984156A0A0G2JMH3 177 aa3.77□□□□□ -1.81
SPTBN1-206ENST00000602898 PGPA6NDG6 321 aa3.77□□□□□ -1.81
SPTBN1-206ENST00000602898 TRBV12-3P01733 135 aa3.77□□□□□ -1.81
SPTBN1-206ENST00000602898 LINC00271P0C7V0 271 aa3.77□□□□□ -1.81
SPTBN1-206ENST00000602898 ZNF823P16415 610 aa3.77□□□□□ -1.81
SPTBN1-206ENST00000602898 UBE2L3P68036 154 aaKnown RBP3.77□□□□□ -1.81
SPTBN1-206ENST00000602898 VN1R4Q7Z5H5 301 aa3.77□□□□□ -1.81
SPTBN1-206ENST00000602898 ARL17AQ8IVW1 177 aa3.77□□□□□ -1.81
SPTBN1-206ENST00000602898 DRAM1Q8N682 238 aa3.77□□□□□ -1.81
SPTBN1-206ENST00000602898 C10orf105Q8TEF2 133 aa3.77□□□□□ -1.81
SPTBN1-206ENST00000602898 UPK3BQ9BT76 320 aa3.77□□□□□ -1.81
SPTBN1-206ENST00000602898 LAMA3Q16787 3333 aa3.77□□□□□ -1.81
SPTBN1-206ENST00000602898 IGKV1-9A0A0C4DH69 117 aa3.76□□□□□ -1.81
SPTBN1-206ENST00000602898 H3BMM0 161 aa3.76□□□□□ -1.81
SPTBN1-206ENST00000602898 LST1O00453 97 aa3.76□□□□□ -1.81
SPTBN1-206ENST00000602898 ARL14EPLP0DKL9 152 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms