RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 ZNF876PQ49A33 203 aa7.04□□□□□ -1.28
CSMD1-216ENST00000602557 NDUFS7O75251 213 aa7.04□□□□□ -1.28
CSMD1-216ENST00000602557 HLA-DMBP28068 263 aa7.04□□□□□ -1.28
CSMD1-216ENST00000602557 UBE2DNLQ8IWF7 75 aa7.04□□□□□ -1.28
CSMD1-216ENST00000602557 TP53TG1Q9Y2A0 90 aa7.04□□□□□ -1.28
CSMD1-216ENST00000602557 A0A087WX48 190 aa7.04□□□□□ -1.28
CSMD1-216ENST00000602557 CDK2AP2O75956 126 aa7.04□□□□□ -1.28
CSMD1-216ENST00000602557 IGHV3-53P01767 116 aa7.04□□□□□ -1.28
CSMD1-216ENST00000602557 MRPL35Q9NZE8 188 aaKnown RBP7.04□□□□□ -1.28
CSMD1-216ENST00000602557 PRIMA1Q86XR5 153 aa7.04□□□□□ -1.28
CSMD1-216ENST00000602557 IGHV1-3A0A0C4DH29 117 aa7.04□□□□□ -1.28
CSMD1-216ENST00000602557 PSPNO60542 156 aa7.04□□□□□ -1.28
CSMD1-216ENST00000602557 FOXG1P55316 489 aaPredicted RBP7.04□□□□□ -1.28
CSMD1-216ENST00000602557 VCYO14598 125 aa7.04□□□□□ -1.28
CSMD1-216ENST00000602557 ERCC8Q13216 396 aa7.04□□□□□ -1.28
CSMD1-216ENST00000602557 LYPD6BQ8NI32 183 aa7.04□□□□□ -1.28
CSMD1-216ENST00000602557 SRRM5B3KS81 715 aa7.03□□□□□ -1.28
CSMD1-216ENST00000602557 SPACA3Q8IXA5 215 aa7.03□□□□□ -1.28
CSMD1-216ENST00000602557 HOXD3P31249 432 aaPredicted RBP7.03□□□□□ -1.28
CSMD1-216ENST00000602557 MT-ATP8P03928 68 aa7.03□□□□□ -1.28
CSMD1-216ENST00000602557 Q6ZRM9 215 aa7.03□□□□□ -1.28
CSMD1-216ENST00000602557 CD177Q8N6Q3 437 aa7.03□□□□□ -1.28
CSMD1-216ENST00000602557 LINC00473A8K010 186 aa7.03□□□□□ -1.28
CSMD1-216ENST00000602557 UBL5Q9BZL1 73 aa7.03□□□□□ -1.28
CSMD1-216ENST00000602557 U3KQE9 123 aa7.03□□□□□ -1.28
CSMD1-216ENST00000602557 H0YJW9 148 aa7.03□□□□□ -1.28
CSMD1-216ENST00000602557 METRNQ9UJH8 293 aa7.03□□□□□ -1.28
CSMD1-216ENST00000602557 NAV2Q8IVL1 2488 aa7.03□□□□□ -1.28
CSMD1-216ENST00000602557 TRAV12-2A0A075B6T6 113 aa7.03□□□□□ -1.28
CSMD1-216ENST00000602557 hADV29S1A0JD25 119 aa7.03□□□□□ -1.28
CSMD1-216ENST00000602557 BRD3OSQ6XYD6 125 aa7.03□□□□□ -1.28
CSMD1-216ENST00000602557 TMEM105Q8N8V8 129 aa7.03□□□□□ -1.28
CSMD1-216ENST00000602557 SRSF7Q16629 238 aaKnown RBP eCLIP7.02□□□□□ -1.28
CSMD1-216ENST00000602557 ANAPC10Q9UM13 185 aa7.02□□□□□ -1.28
CSMD1-216ENST00000602557 YPEL3P61236 119 aaPredicted RBP7.02□□□□□ -1.29
CSMD1-216ENST00000602557 PKD1L2Q7Z442 2459 aa7.02□□□□□ -1.29
CSMD1-216ENST00000602557 CRLF1O75462 422 aa7.02□□□□□ -1.29
CSMD1-216ENST00000602557 QRFPP83859 136 aa7.02□□□□□ -1.29
CSMD1-216ENST00000602557 C5orf64Q2M2E5 130 aa7.02□□□□□ -1.29
CSMD1-216ENST00000602557 FAM166AQ6J272 317 aa7.02□□□□□ -1.29
CSMD1-216ENST00000602557 M0R1W7 72 aa7.02□□□□□ -1.29
CSMD1-216ENST00000602557 SPTBN4Q9H254 2564 aa7.02□□□□□ -1.29
CSMD1-216ENST00000602557 TMEM178BH3BS89 294 aa7.02□□□□□ -1.29
CSMD1-216ENST00000602557 CT83Q5H943 113 aa7.02□□□□□ -1.29
CSMD1-216ENST00000602557 TRBV7-1A0A0A6YYK4 115 aa7.02□□□□□ -1.29
CSMD1-216ENST00000602557 KNCNA6PVL3 124 aa7.02□□□□□ -1.29
CSMD1-216ENST00000602557 GFRA4Q9GZZ7 299 aa7.02□□□□□ -1.29
CSMD1-216ENST00000602557 CFHR1Q03591 330 aa7.02□□□□□ -1.29
CSMD1-216ENST00000602557 SCRT2Q9NQ03 307 aa7.02□□□□□ -1.29
CSMD1-216ENST00000602557 K7EN84 100 aa7.01□□□□□ -1.29
CSMD1-216ENST00000602557 ZNF672Q499Z4 452 aaPredicted RBP7.01□□□□□ -1.29
CSMD1-216ENST00000602557 DTX1Q86Y01 620 aa7.01□□□□□ -1.29
CSMD1-216ENST00000602557 EFNA2O43921 213 aa7.01□□□□□ -1.29
CSMD1-216ENST00000602557 IL18BPO95998 194 aa7.01□□□□□ -1.29
CSMD1-216ENST00000602557 IGHG2P01859 326 aa7.01□□□□□ -1.29
CSMD1-216ENST00000602557 WIPF2Q8TF74 440 aaPredicted RBP7.01□□□□□ -1.29
CSMD1-216ENST00000602557 Q8N8P6 123 aa7.01□□□□□ -1.29
CSMD1-216ENST00000602557 KLF5Q13887 457 aaPredicted RBP7.01□□□□□ -1.29
CSMD1-216ENST00000602557 LGALS9BQ3B8N2 356 aa7.01□□□□□ -1.29
CSMD1-216ENST00000602557 LGALS9CQ6DKI2 356 aa7.01□□□□□ -1.29
CSMD1-216ENST00000602557 NBL1P41271 181 aa7.01□□□□□ -1.29
CSMD1-216ENST00000602557 COL4A6Q14031 1691 aa7.01□□□□□ -1.29
CSMD1-216ENST00000602557 SIVA1O15304 175 aa7.01□□□□□ -1.29
CSMD1-216ENST00000602557 FAM104BQ5XKR9 115 aa7.01□□□□□ -1.29
CSMD1-216ENST00000602557 IGHG3P01860 377 aa7.01□□□□□ -1.29
CSMD1-216ENST00000602557 CR1LQ2VPA4 569 aa7.01□□□□□ -1.29
CSMD1-216ENST00000602557 NDUFV3P56181 108 aaKnown RBP7.01□□□□□ -1.29
CSMD1-216ENST00000602557 SPANXDQ9BXN6 97 aa7.01□□□□□ -1.29
CSMD1-216ENST00000602557 ZNF492Q9P255 531 aa7.01□□□□□ -1.29
CSMD1-216ENST00000602557 MLANAQ16655 118 aa7.01□□□□□ -1.29
CSMD1-216ENST00000602557 F8WEM9 126 aa7□□□□□ -1.29
CSMD1-216ENST00000602557 EFNA4P52798 201 aa7□□□□□ -1.29
CSMD1-216ENST00000602557 FXYD2P54710 66 aa7□□□□□ -1.29
CSMD1-216ENST00000602557 BAALC-AS2P0C853 105 aa7□□□□□ -1.29
CSMD1-216ENST00000602557 FOXI2Q6ZQN5 318 aa7□□□□□ -1.29
CSMD1-216ENST00000602557 TRAV25A0A0B4J276 109 aa7□□□□□ -1.29
CSMD1-216ENST00000602557 V9GYY9 64 aa7□□□□□ -1.29
CSMD1-216ENST00000602557 H3BUX3 64 aa7□□□□□ -1.29
CSMD1-216ENST00000602557 E9PLN8 166 aa7□□□□□ -1.29
CSMD1-216ENST00000602557 Q6ZUT4 128 aa7□□□□□ -1.29
CSMD1-216ENST00000602557 A0A1W2PPI3 338 aa7□□□□□ -1.29
CSMD1-216ENST00000602557 DAD1P61803 113 aa7□□□□□ -1.29
CSMD1-216ENST00000602557 ZFP36L1Q07352 338 aaKnown RBP7□□□□□ -1.29
CSMD1-216ENST00000602557 KLHL30-AS1Q8NEE0 82 aa7□□□□□ -1.29
CSMD1-216ENST00000602557 SPTSSBQ8NFR3 76 aa7□□□□□ -1.29
CSMD1-216ENST00000602557 PTH2Q96A98 100 aa7□□□□□ -1.29
CSMD1-216ENST00000602557 NPYP01303 97 aa7□□□□□ -1.29
CSMD1-216ENST00000602557 NUP210LQ5VU65 1888 aa7□□□□□ -1.29
CSMD1-216ENST00000602557 TAL2Q16559 108 aa7□□□□□ -1.29
CSMD1-216ENST00000602557 RNASE13Q5GAN3 156 aaKnown RBP7□□□□□ -1.29
CSMD1-216ENST00000602557 TRPT1Q86TN4 253 aaKnown RBP7□□□□□ -1.29
CSMD1-216ENST00000602557 ANKRD11Q6UB99 2663 aaPredicted RBP7□□□□□ -1.29
CSMD1-216ENST00000602557 GAFA1Q96PS6 74 aa7□□□□□ -1.29
CSMD1-216ENST00000602557 IGKV1-16P04430 117 aa6.99□□□□□ -1.29
CSMD1-216ENST00000602557 PIP4P2Q8N4L2 257 aa6.99□□□□□ -1.29
CSMD1-216ENST00000602557 LY6G5BQ8NDX9 201 aa6.99□□□□□ -1.29
CSMD1-216ENST00000602557 UBE2E2Q96LR5 201 aa6.99□□□□□ -1.29
CSMD1-216ENST00000602557 Q6P435 159 aa6.99□□□□□ -1.29
CSMD1-216ENST00000602557 C20orf204Q6ZNR8 217 aa6.99□□□□□ -1.29
CSMD1-216ENST00000602557 TMEM190Q8WZ59 177 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms