RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 XGP55808 180 aa12.23□□□□□ -0.45
CHMP2A-208ENST00000601220 ZNF266Q14584 549 aa12.23□□□□□ -0.45
CHMP2A-208ENST00000601220 IQCF2Q8IXL9 164 aa12.23□□□□□ -0.45
CHMP2A-208ENST00000601220 PAXXQ9BUH6 204 aa12.23□□□□□ -0.45
CHMP2A-208ENST00000601220 MRPL32Q9BYC8 188 aaKnown RBP12.23□□□□□ -0.45
CHMP2A-208ENST00000601220 OR5AC2Q9NZP5 309 aa12.23□□□□□ -0.45
CHMP2A-208ENST00000601220 MDFICQ9P1T7 246 aa12.23□□□□□ -0.45
CHMP2A-208ENST00000601220 MRPL23Q16540 153 aaKnown RBP12.22□□□□□ -0.45
CHMP2A-208ENST00000601220 ARPC5LQ9BPX5 153 aa12.22□□□□□ -0.45
CHMP2A-208ENST00000601220 WDR61Q9GZS3 305 aaKnown RBP12.22□□□□□ -0.45
CHMP2A-208ENST00000601220 RBAKDNA6NC62 111 aa12.21□□□□□ -0.45
CHMP2A-208ENST00000601220 E5RGE8 158 aa12.21□□□□□ -0.45
CHMP2A-208ENST00000601220 NEGR1Q7Z3B1 354 aa12.21□□□□□ -0.45
CHMP2A-208ENST00000601220 RASL10AQ92737 203 aa12.21□□□□□ -0.45
CHMP2A-208ENST00000601220 ZNF479Q96JC4 524 aa12.21□□□□□ -0.45
CHMP2A-208ENST00000601220 SLC25A31Q9H0C2 315 aa12.21□□□□□ -0.45
CHMP2A-208ENST00000601220 VPS13BQ7Z7G8 4022 aa12.2□□□□□ -0.46
CHMP2A-208ENST00000601220 K7EQD1 137 aa12.2□□□□□ -0.46
CHMP2A-208ENST00000601220 ZNF415Q09FC8 603 aa12.2□□□□□ -0.46
CHMP2A-208ENST00000601220 ASAH1Q13510 395 aa12.2□□□□□ -0.46
CHMP2A-208ENST00000601220 MUC21Q5SSG8 566 aa12.2□□□□□ -0.46
CHMP2A-208ENST00000601220 Q6AWC8 147 aa12.2□□□□□ -0.46
CHMP2A-208ENST00000601220 CDPF1Q6NVV7 123 aa12.2□□□□□ -0.46
CHMP2A-208ENST00000601220 LYPD1Q8N2G4 141 aa12.2□□□□□ -0.46
CHMP2A-208ENST00000601220 NMES1Q9C002 83 aa12.2□□□□□ -0.46
CHMP2A-208ENST00000601220 NDUFA13Q9P0J0 144 aa12.2□□□□□ -0.46
CHMP2A-208ENST00000601220 A0A087WTM6 91 aa12.19□□□□□ -0.46
CHMP2A-208ENST00000601220 SFTA3P0C7M3 94 aa12.19□□□□□ -0.46
CHMP2A-208ENST00000601220 ERVFC1-1P60608 527 aa12.19□□□□□ -0.46
CHMP2A-208ENST00000601220 RANP62826 216 aaKnown RBP12.19□□□□□ -0.46
CHMP2A-208ENST00000601220 OR10G4Q8NGN3 311 aa12.19□□□□□ -0.46
CHMP2A-208ENST00000601220 EPM2AB3EWF7 344 aa12.18□□□□□ -0.46
CHMP2A-208ENST00000601220 DIRC3C9JPN6 131 aa12.18□□□□□ -0.46
CHMP2A-208ENST00000601220 DNAH10OSP0CZ25 163 aa12.18□□□□□ -0.46
CHMP2A-208ENST00000601220 KRTAP10-1P60331 282 aa12.18□□□□□ -0.46
CHMP2A-208ENST00000601220 MZT2BQ6NZ67 158 aa12.18□□□□□ -0.46
CHMP2A-208ENST00000601220 NFE4Q86UQ8 179 aa12.18□□□□□ -0.46
CHMP2A-208ENST00000601220 WFDC10BQ8IUB3 73 aa12.18□□□□□ -0.46
CHMP2A-208ENST00000601220 EREGO14944 169 aa12.17□□□□□ -0.46
CHMP2A-208ENST00000601220 CSN1S1P47710 185 aa12.17□□□□□ -0.46
CHMP2A-208ENST00000601220 LRRC37A5PQ49AS3 106 aa12.17□□□□□ -0.46
CHMP2A-208ENST00000601220 LINC00299Q6ZSB3 139 aa12.17□□□□□ -0.46
CHMP2A-208ENST00000601220 SPXQ9BT56 116 aa12.17□□□□□ -0.46
CHMP2A-208ENST00000601220 KCNIP2Q9NS61 270 aa12.17□□□□□ -0.46
CHMP2A-208ENST00000601220 LENEPQ9Y5L5 61 aa12.17□□□□□ -0.46
CHMP2A-208ENST00000601220 LY96Q9Y6Y9 160 aa12.17□□□□□ -0.46
CHMP2A-208ENST00000601220 TRGV4A0A0C4DH28 118 aa12.16□□□□□ -0.46
CHMP2A-208ENST00000601220 OR7C2O60412 319 aa12.16□□□□□ -0.46
CHMP2A-208ENST00000601220 GYPEP15421 78 aa12.16□□□□□ -0.46
CHMP2A-208ENST00000601220 H2BFSP57053 126 aa12.16□□□□□ -0.46
CHMP2A-208ENST00000601220 TMEM183BQ1AE95 376 aa12.16□□□□□ -0.46
CHMP2A-208ENST00000601220 TDRG1Q3Y452 100 aa12.16□□□□□ -0.46
CHMP2A-208ENST00000601220 TMEM183AQ8IXX5 376 aa12.16□□□□□ -0.46
CHMP2A-208ENST00000601220 TRAV9-2A0A087WT02 112 aa12.15□□□□□ -0.46
CHMP2A-208ENST00000601220 K7EP13 123 aa12.15□□□□□ -0.46
CHMP2A-208ENST00000601220 SRIP30626 198 aa12.15□□□□□ -0.46
CHMP2A-208ENST00000601220 TMED6Q8WW62 240 aa12.15□□□□□ -0.46
CHMP2A-208ENST00000601220 ATP5SQ99766 215 aa12.15□□□□□ -0.46
CHMP2A-208ENST00000601220 MSRB1Q9NZV6 116 aa12.15□□□□□ -0.46
CHMP2A-208ENST00000601220 C17orf112F2Z3M2 114 aa12.14□□□□□ -0.47
CHMP2A-208ENST00000601220 GNRH2O43555 120 aa12.14□□□□□ -0.47
CHMP2A-208ENST00000601220 UBE2L3P68036 154 aaKnown RBP12.14□□□□□ -0.47
CHMP2A-208ENST00000601220 CYCSP99999 105 aaKnown RBP12.14□□□□□ -0.47
CHMP2A-208ENST00000601220 IFITM3Q01628 133 aa12.14□□□□□ -0.47
CHMP2A-208ENST00000601220 TRGV11A0A075B6L2 103 aa12.13□□□□□ -0.47
CHMP2A-208ENST00000601220 TRAV4A0A0B4J268 109 aa12.13□□□□□ -0.47
CHMP2A-208ENST00000601220 EIF3GO75821 320 aaKnown RBP eCLIP12.13□□□□□ -0.47
CHMP2A-208ENST00000601220 ORM1P02763 201 aa12.13□□□□□ -0.47
CHMP2A-208ENST00000601220 FFAR4Q5NUL3 377 aa12.13□□□□□ -0.47
CHMP2A-208ENST00000601220 FAM159AQ6UWV7 190 aa12.13□□□□□ -0.47
CHMP2A-208ENST00000601220 PPP1R1CQ8WVI7 109 aa12.13□□□□□ -0.47
CHMP2A-208ENST00000601220 TVP23CQ96ET8 276 aa12.13□□□□□ -0.47
CHMP2A-208ENST00000601220 DNAH8Q96JB1 4490 aa12.12□□□□□ -0.47
CHMP2A-208ENST00000601220 IGHV3-16A0A0C4DH30 117 aa12.12□□□□□ -0.47
CHMP2A-208ENST00000601220 LOC100131303A0A0U1RQF7 123 aa12.12□□□□□ -0.47
CHMP2A-208ENST00000601220 INAFM2P0DMQ5 153 aa12.12□□□□□ -0.47
CHMP2A-208ENST00000601220 EVI2AP22794 236 aa12.12□□□□□ -0.47
CHMP2A-208ENST00000601220 KHDC3LQ587J8 217 aa12.12□□□□□ -0.47
CHMP2A-208ENST00000601220 OTORQ9NRC9 128 aa12.12□□□□□ -0.47
CHMP2A-208ENST00000601220 PTTG2Q9NZH5 202 aa12.12□□□□□ -0.47
CHMP2A-208ENST00000601220 HSPB11Q9Y547 144 aa12.12□□□□□ -0.47
CHMP2A-208ENST00000601220 UPK1BO75841 260 aa12.11□□□□□ -0.47
CHMP2A-208ENST00000601220 ENKURQ8TC29 256 aa12.11□□□□□ -0.47
CHMP2A-208ENST00000601220 PCNPQ8WW12 178 aaKnown RBP12.11□□□□□ -0.47
CHMP2A-208ENST00000601220 S100ZQ8WXG8 99 aa12.11□□□□□ -0.47
CHMP2A-208ENST00000601220 HYLS1Q96M11 299 aa12.11□□□□□ -0.47
CHMP2A-208ENST00000601220 WFDC1Q9HC57 220 aa12.11□□□□□ -0.47
CHMP2A-208ENST00000601220 PGPA6NDG6 321 aa12.1□□□□□ -0.47
CHMP2A-208ENST00000601220 INMT-MINDY4F8WBC2 141 aa12.1□□□□□ -0.47
CHMP2A-208ENST00000601220 M0R2P5 195 aa12.1□□□□□ -0.47
CHMP2A-208ENST00000601220 MPC2O95563 127 aa12.1□□□□□ -0.47
CHMP2A-208ENST00000601220 TIRAPP58753 221 aa12.1□□□□□ -0.47
CHMP2A-208ENST00000601220 OR4C5Q8NGB2 326 aa12.1□□□□□ -0.47
CHMP2A-208ENST00000601220 TXNDC17Q9BRA2 123 aa12.1□□□□□ -0.47
CHMP2A-208ENST00000601220 MBD2Q9UBB5 411 aa12.1□□□□□ -0.47
CHMP2A-208ENST00000601220 MYCBP2O75592 4640 aa12.1□□□□□ -0.47
CHMP2A-208ENST00000601220 LRCOL1A6NCL2 159 aa12.09□□□□□ -0.47
CHMP2A-208ENST00000601220 C9JCJ5 164 aa12.09□□□□□ -0.47
CHMP2A-208ENST00000601220 IFNA5P01569 189 aa12.09□□□□□ -0.47
CHMP2A-208ENST00000601220 TYMSP04818 313 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms