RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 KLF12Q9Y4X4 402 aa16.01■□□□□ 0.15
CHMP2A-204ENST00000597848 SMIM9A6NGZ8 99 aa16■□□□□ 0.15
CHMP2A-204ENST00000597848 H7BYZ3 331 aa16■□□□□ 0.15
CHMP2A-204ENST00000597848 S100A9P06702 114 aaKnown RBP16■□□□□ 0.15
CHMP2A-204ENST00000597848 MIFP14174 115 aa16■□□□□ 0.15
CHMP2A-204ENST00000597848 TMEM183BQ1AE95 376 aa16■□□□□ 0.15
CHMP2A-204ENST00000597848 ZNF767PQ75MW2 155 aa16■□□□□ 0.15
CHMP2A-204ENST00000597848 Q86TA4 180 aa16■□□□□ 0.15
CHMP2A-204ENST00000597848 C2CD4CQ8TF44 421 aa16■□□□□ 0.15
CHMP2A-204ENST00000597848 C8orf49Q96NF6 230 aa16■□□□□ 0.15
CHMP2A-204ENST00000597848 NEU1Q99519 415 aa16■□□□□ 0.15
CHMP2A-204ENST00000597848 EIF5A2Q9GZV4 153 aaKnown RBP16■□□□□ 0.15
CHMP2A-204ENST00000597848 MED9Q9NWA0 146 aa16■□□□□ 0.15
CHMP2A-204ENST00000597848 IGHV4-28A0A0C4DH34 117 aa15.99■□□□□ 0.15
CHMP2A-204ENST00000597848 ZNF705GA8MUZ8 300 aaPredicted RBP15.99■□□□□ 0.15
CHMP2A-204ENST00000597848 DEFB4AO15263 64 aa15.99■□□□□ 0.15
CHMP2A-204ENST00000597848 IFITM2Q01629 132 aa15.99■□□□□ 0.15
CHMP2A-204ENST00000597848 RRN3P1Q2M238 152 aa15.99■□□□□ 0.15
CHMP2A-204ENST00000597848 TOR2AQ5JU69 321 aa15.99■□□□□ 0.15
CHMP2A-204ENST00000597848 ZNF506Q5JVG8 444 aa15.99■□□□□ 0.15
CHMP2A-204ENST00000597848 PRM2P04554 102 aa15.98■□□□□ 0.15
CHMP2A-204ENST00000597848 TAS2R60P59551 318 aa15.98■□□□□ 0.15
CHMP2A-204ENST00000597848 C11orf52Q96A22 123 aa15.98■□□□□ 0.15
CHMP2A-204ENST00000597848 FAM210AQ96ND0 272 aa15.98■□□□□ 0.15
CHMP2A-204ENST00000597848 ZFP30Q9Y2G7 519 aa15.98■□□□□ 0.15
CHMP2A-204ENST00000597848 A0A0J9YWU9 116 aa15.97■□□□□ 0.15
CHMP2A-204ENST00000597848 TRBV6-1A0A0K0K1D8 114 aa15.97■□□□□ 0.15
CHMP2A-204ENST00000597848 ZNF324O75467 553 aaPredicted RBP15.97■□□□□ 0.15
CHMP2A-204ENST00000597848 SMUG1Q53HV7 270 aa15.97■□□□□ 0.15
CHMP2A-204ENST00000597848 Q6ZQT7 251 aa15.97■□□□□ 0.15
CHMP2A-204ENST00000597848 Q8NAQ8 132 aa15.97■□□□□ 0.15
CHMP2A-204ENST00000597848 DNAH9Q9NYC9 4486 aa15.96■□□□□ 0.15
CHMP2A-204ENST00000597848 RGS13O14921 159 aa15.96■□□□□ 0.15
CHMP2A-204ENST00000597848 GCGP01275 180 aa15.96■□□□□ 0.15
CHMP2A-204ENST00000597848 RPL35P42766 123 aaKnown RBP15.96■□□□□ 0.15
CHMP2A-204ENST00000597848 Q6AWC8 147 aa15.96■□□□□ 0.15
CHMP2A-204ENST00000597848 PYGO2Q9BRQ0 406 aa15.96■□□□□ 0.15
CHMP2A-204ENST00000597848 TENM3Q9P273 2699 aa15.96■□□□□ 0.15
CHMP2A-204ENST00000597848 LTAP01374 205 aa15.95■□□□□ 0.14
CHMP2A-204ENST00000597848 EMP1P54849 157 aa15.95■□□□□ 0.14
CHMP2A-204ENST00000597848 BAGE2Q86Y30 109 aa15.95■□□□□ 0.14
CHMP2A-204ENST00000597848 DERL1Q9BUN8 251 aa15.95■□□□□ 0.14
CHMP2A-204ENST00000597848 TGP01266 2768 aa15.95■□□□□ 0.14
CHMP2A-204ENST00000597848 TRAV21A0A0B4J279 112 aa15.94■□□□□ 0.14
CHMP2A-204ENST00000597848 AZU1P20160 251 aa15.94■□□□□ 0.14
CHMP2A-204ENST00000597848 COL7A1Q02388 2944 aa15.93■□□□□ 0.14
CHMP2A-204ENST00000597848 ZNF80P51504 273 aaPredicted RBP15.93■□□□□ 0.14
CHMP2A-204ENST00000597848 MUC21Q5SSG8 566 aa15.93■□□□□ 0.14
CHMP2A-204ENST00000597848 NHLRC2Q8NBF2 726 aa15.93■□□□□ 0.14
CHMP2A-204ENST00000597848 C11orf68Q9H3H3 251 aaKnown RBP15.93■□□□□ 0.14
CHMP2A-204ENST00000597848 NAGKQ9UJ70 344 aa15.93■□□□□ 0.14
CHMP2A-204ENST00000597848 IGHV1OR15-1A0A075B7D0 117 aa15.92■□□□□ 0.14
CHMP2A-204ENST00000597848 RAB19A4D1S5 217 aa15.92■□□□□ 0.14
CHMP2A-204ENST00000597848 TMEM189A5PLL7 270 aa15.92■□□□□ 0.14
CHMP2A-204ENST00000597848 CBY3A6NI87 242 aa15.92■□□□□ 0.14
CHMP2A-204ENST00000597848 CEBPGP53567 150 aa15.92■□□□□ 0.14
CHMP2A-204ENST00000597848 TMEM183AQ8IXX5 376 aa15.92■□□□□ 0.14
CHMP2A-204ENST00000597848 EIF4E3Q8N5X7 224 aaKnown RBP15.92■□□□□ 0.14
CHMP2A-204ENST00000597848 EDA2RQ9HAV5 297 aa15.92■□□□□ 0.14
CHMP2A-204ENST00000597848 TMEM250H0YL14 139 aa15.91■□□□□ 0.14
CHMP2A-204ENST00000597848 PFN1P07737 140 aaKnown RBP15.91■□□□□ 0.14
CHMP2A-204ENST00000597848 ZNF674Q2M3X9 581 aa15.91■□□□□ 0.14
CHMP2A-204ENST00000597848 CLLU1Q5K131 121 aa15.91■□□□□ 0.14
CHMP2A-204ENST00000597848 FAM159AQ6UWV7 190 aa15.91■□□□□ 0.14
CHMP2A-204ENST00000597848 ZC2HC1AQ96GY0 325 aa15.91■□□□□ 0.14
CHMP2A-204ENST00000597848 LINC00467Q9BRT7 94 aa15.91■□□□□ 0.14
CHMP2A-204ENST00000597848 FABP5P3A8MUU1 101 aa15.9■□□□□ 0.14
CHMP2A-204ENST00000597848 PEA15Q15121 130 aa15.9■□□□□ 0.14
CHMP2A-204ENST00000597848 CENPWQ5EE01 88 aa15.9■□□□□ 0.14
CHMP2A-204ENST00000597848 ZNF493Q6ZR52 646 aa15.9■□□□□ 0.14
CHMP2A-204ENST00000597848 C16orf74Q96GX8 76 aa15.9■□□□□ 0.14
CHMP2A-204ENST00000597848 GNG4P50150 75 aa15.89■□□□□ 0.13
CHMP2A-204ENST00000597848 TMEM263Q8WUH6 116 aaKnown RBP15.89■□□□□ 0.13
CHMP2A-204ENST00000597848 SRP19P09132 144 aaKnown RBP15.88■□□□□ 0.13
CHMP2A-204ENST00000597848 ANXA2RQ3ZCQ2 193 aa15.88■□□□□ 0.13
CHMP2A-204ENST00000597848 COX8CQ7Z4L0 72 aa15.88■□□□□ 0.13
CHMP2A-204ENST00000597848 WWC2-AS2Q96NR7 200 aa15.88■□□□□ 0.13
CHMP2A-204ENST00000597848 TP53TG3Q9ULZ0 132 aa15.88■□□□□ 0.13
CHMP2A-204ENST00000597848 HUWE1Q7Z6Z7 4374 aaKnown RBP15.88■□□□□ 0.13
CHMP2A-204ENST00000597848 FAM162BQ5T6X4 162 aa15.87■□□□□ 0.13
CHMP2A-204ENST00000597848 RNASE8Q8TDE3 154 aaKnown RBP15.87■□□□□ 0.13
CHMP2A-204ENST00000597848 PARLQ9H300 379 aa15.87■□□□□ 0.13
CHMP2A-204ENST00000597848 CXorf65A6NEN9 183 aa15.86■□□□□ 0.13
CHMP2A-204ENST00000597848 SH2D1AO60880 128 aa15.86■□□□□ 0.13
CHMP2A-204ENST00000597848 NDUFS6O75380 124 aaKnown RBP15.86■□□□□ 0.13
CHMP2A-204ENST00000597848 MGST1P10620 155 aaKnown RBP15.86■□□□□ 0.13
CHMP2A-204ENST00000597848 CRIP1P50238 77 aa15.86■□□□□ 0.13
CHMP2A-204ENST00000597848 SRSF3P84103 164 aaKnown RBP15.86■□□□□ 0.13
CHMP2A-204ENST00000597848 C11orf45Q8TAV5 145 aa15.86■□□□□ 0.13
CHMP2A-204ENST00000597848 KCNS1Q96KK3 526 aa15.86■□□□□ 0.13
CHMP2A-204ENST00000597848 MLST8Q9BVC4 326 aa15.86■□□□□ 0.13
CHMP2A-204ENST00000597848 SDF2L1Q9HCN8 221 aa15.86■□□□□ 0.13
CHMP2A-204ENST00000597848 SNURFLB1AK76 121 aa15.85■□□□□ 0.13
CHMP2A-204ENST00000597848 ORM1P02763 201 aa15.85■□□□□ 0.13
CHMP2A-204ENST00000597848 SPART-AS1P0CW21 52 aa15.85■□□□□ 0.13
CHMP2A-204ENST00000597848 FAM222AQ5U5X8 452 aa15.85■□□□□ 0.13
CHMP2A-204ENST00000597848 PRR27Q6MZM9 219 aa15.85■□□□□ 0.13
CHMP2A-204ENST00000597848 IL17DQ8TAD2 202 aa15.85■□□□□ 0.13
CHMP2A-204ENST00000597848 GSN-AS1Q9NRJ2 163 aa15.85■□□□□ 0.13
CHMP2A-204ENST00000597848 C11orf21Q9P2W6 132 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms