RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 PRR9Q5T870 116 aa10.17□□□□□ -0.78
PNKP-202ENST00000593706 FAM122CQ6P4D5 195 aa10.17□□□□□ -0.78
PNKP-202ENST00000593706 Q6ZTI0 123 aa10.17□□□□□ -0.78
PNKP-202ENST00000593706 ASB13Q8WXK3 278 aa10.17□□□□□ -0.78
PNKP-202ENST00000593706 PYGO2Q9BRQ0 406 aa10.17□□□□□ -0.78
PNKP-202ENST00000593706 LINC00467Q9BRT7 94 aa10.17□□□□□ -0.78
PNKP-202ENST00000593706 G3V3Q6 166 aa10.16□□□□□ -0.78
PNKP-202ENST00000593706 EIF3GO75821 320 aaKnown RBP eCLIP10.16□□□□□ -0.78
PNKP-202ENST00000593706 NMBP08949 121 aa10.16□□□□□ -0.78
PNKP-202ENST00000593706 RAB2AP61019 212 aa10.16□□□□□ -0.78
PNKP-202ENST00000593706 CD300CQ08708 224 aa10.16□□□□□ -0.78
PNKP-202ENST00000593706 LYPD1Q8N2G4 141 aa10.16□□□□□ -0.78
PNKP-202ENST00000593706 OR2G3Q8NGZ4 309 aa10.16□□□□□ -0.78
PNKP-202ENST00000593706 RNF222A6NCQ9 220 aa10.15□□□□□ -0.78
PNKP-202ENST00000593706 DAZ2Q13117 558 aaKnown RBP10.15□□□□□ -0.78
PNKP-202ENST00000593706 BTN1A1Q13410 526 aa10.15□□□□□ -0.78
PNKP-202ENST00000593706 C11orf72Q8NBR9 251 aa10.15□□□□□ -0.78
PNKP-202ENST00000593706 ZNF680Q8NEM1 530 aa10.15□□□□□ -0.78
PNKP-202ENST00000593706 ZNF492Q9P255 531 aa10.15□□□□□ -0.78
PNKP-202ENST00000593706 TRGV1A0A0A0MS02 117 aa10.14□□□□□ -0.79
PNKP-202ENST00000593706 TRBV7-9A0A0J9YWB2 115 aa10.14□□□□□ -0.79
PNKP-202ENST00000593706 RBAKDNA6NC62 111 aa10.14□□□□□ -0.79
PNKP-202ENST00000593706 EREGO14944 169 aa10.14□□□□□ -0.79
PNKP-202ENST00000593706 SIVA1O15304 175 aa10.14□□□□□ -0.79
PNKP-202ENST00000593706 TAS2R45P59539 299 aa10.14□□□□□ -0.79
PNKP-202ENST00000593706 RANP62826 216 aaKnown RBP10.14□□□□□ -0.79
PNKP-202ENST00000593706 ZNF266Q14584 549 aa10.14□□□□□ -0.79
PNKP-202ENST00000593706 Q6ZQT7 251 aa10.14□□□□□ -0.79
PNKP-202ENST00000593706 Q8TAT8 98 aa10.14□□□□□ -0.79
PNKP-202ENST00000593706 PSMG3Q9BT73 122 aaPredicted RBP10.14□□□□□ -0.79
PNKP-202ENST00000593706 GSN-AS1Q9NRJ2 163 aa10.14□□□□□ -0.79
PNKP-202ENST00000593706 A0A096LPF7 62 aa10.13□□□□□ -0.79
PNKP-202ENST00000593706 EPM2AB3EWF7 344 aa10.13□□□□□ -0.79
PNKP-202ENST00000593706 ZNF138P52744 262 aa10.13□□□□□ -0.79
PNKP-202ENST00000593706 ACOT6Q3I5F7 207 aaPredicted RBP10.13□□□□□ -0.79
PNKP-202ENST00000593706 ANXA2RQ3ZCQ2 193 aa10.13□□□□□ -0.79
PNKP-202ENST00000593706 TMEM78Q5T7P6 136 aa10.13□□□□□ -0.79
PNKP-202ENST00000593706 VSIG2Q96IQ7 327 aa10.13□□□□□ -0.79
PNKP-202ENST00000593706 TNFSF18Q9UNG2 199 aa10.13□□□□□ -0.79
PNKP-202ENST00000593706 DIRC3C9JPN6 131 aa10.12□□□□□ -0.79
PNKP-202ENST00000593706 ATP6V0CP27449 155 aa10.12□□□□□ -0.79
PNKP-202ENST00000593706 RNASE4P34096 147 aaKnown RBP10.12□□□□□ -0.79
PNKP-202ENST00000593706 ERVFC1-1P60608 527 aa10.12□□□□□ -0.79
PNKP-202ENST00000593706 PQLC2Q6ZP29 291 aa10.12□□□□□ -0.79
PNKP-202ENST00000593706 HSD17B11Q8NBQ5 300 aa10.12□□□□□ -0.79
PNKP-202ENST00000593706 SH3BGRL3Q9H299 93 aa10.12□□□□□ -0.79
PNKP-202ENST00000593706 OTORQ9NRC9 128 aa10.12□□□□□ -0.79
PNKP-202ENST00000593706 ICOSQ9Y6W8 199 aa10.12□□□□□ -0.79
PNKP-202ENST00000593706 FAT1Q14517 4588 aa10.11□□□□□ -0.79
PNKP-202ENST00000593706 NXPH4O95158 308 aa10.11□□□□□ -0.79
PNKP-202ENST00000593706 EIF4E3Q8N5X7 224 aaKnown RBP10.11□□□□□ -0.79
PNKP-202ENST00000593706 OR10G4Q8NGN3 311 aa10.11□□□□□ -0.79
PNKP-202ENST00000593706 OR10G9Q8NGN4 311 aa10.11□□□□□ -0.79
PNKP-202ENST00000593706 OR10G7Q8NGN6 311 aa10.11□□□□□ -0.79
PNKP-202ENST00000593706 OR2T35Q8NGX2 323 aa10.11□□□□□ -0.79
PNKP-202ENST00000593706 SUN5Q8TC36 379 aa10.11□□□□□ -0.79
PNKP-202ENST00000593706 C18orf15Q96N68 181 aa10.11□□□□□ -0.79
PNKP-202ENST00000593706 PAX4O43316 350 aa10.1□□□□□ -0.79
PNKP-202ENST00000593706 GPX1P07203 203 aa10.1□□□□□ -0.79
PNKP-202ENST00000593706 STAG3L2P0CL84 134 aa10.1□□□□□ -0.79
PNKP-202ENST00000593706 STAG3L3P0CL85 134 aa10.1□□□□□ -0.79
PNKP-202ENST00000593706 ARL14EPLP0DKL9 152 aa10.1□□□□□ -0.79
PNKP-202ENST00000593706 CSN1S1P47710 185 aa10.1□□□□□ -0.79
PNKP-202ENST00000593706 Q6ZRN7 208 aaPredicted RBP10.1□□□□□ -0.79
PNKP-202ENST00000593706 ARL6IP6Q8N6S5 226 aa10.1□□□□□ -0.79
PNKP-202ENST00000593706 TMED6Q8WW62 240 aa10.1□□□□□ -0.79
PNKP-202ENST00000593706 FXYD6-FXYD2A0A087WZ82 144 aa10.09□□□□□ -0.79
PNKP-202ENST00000593706 A0A1W2PPV4 95 aa10.09□□□□□ -0.79
PNKP-202ENST00000593706 HMGB3O15347 200 aaKnown RBP10.09□□□□□ -0.79
PNKP-202ENST00000593706 FUSP35637 526 aaKnown RBP eCLIP10.09□□□□□ -0.79
PNKP-202ENST00000593706 CDC34P49427 236 aaPredicted RBP10.09□□□□□ -0.79
PNKP-202ENST00000593706 TCL1AP56279 114 aa10.09□□□□□ -0.79
PNKP-202ENST00000593706 SERF2P84101 59 aa10.09□□□□□ -0.79
PNKP-202ENST00000593706 IBA57Q5T440 356 aaKnown RBP10.09□□□□□ -0.79
PNKP-202ENST00000593706 Q6AWC8 147 aa10.09□□□□□ -0.79
PNKP-202ENST00000593706 RPL7L1Q6DKI1 246 aaKnown RBP10.09□□□□□ -0.79
PNKP-202ENST00000593706 RAB24Q969Q5 203 aa10.09□□□□□ -0.79
PNKP-202ENST00000593706 PGPEP1Q9NXJ5 209 aa10.09□□□□□ -0.79
PNKP-202ENST00000593706 TP53TG3Q9ULZ0 132 aa10.09□□□□□ -0.79
PNKP-202ENST00000593706 LENEPQ9Y5L5 61 aa10.09□□□□□ -0.79
PNKP-202ENST00000593706 MYCBP2O75592 4640 aa10.09□□□□□ -0.79
PNKP-202ENST00000593706 IGHV1OR15-1A0A075B7D0 117 aa10.08□□□□□ -0.8
PNKP-202ENST00000593706 RGS13O14921 159 aa10.08□□□□□ -0.8
PNKP-202ENST00000593706 IGHV3-53P01767 116 aa10.08□□□□□ -0.8
PNKP-202ENST00000593706 CDPF1Q6NVV7 123 aa10.08□□□□□ -0.8
PNKP-202ENST00000593706 INO80EQ8NBZ0 244 aaPredicted RBP10.08□□□□□ -0.8
PNKP-202ENST00000593706 ST6GAL2Q96JF0 529 aa10.08□□□□□ -0.8
PNKP-202ENST00000593706 ARPC5LQ9BPX5 153 aa10.08□□□□□ -0.8
PNKP-202ENST00000593706 KLF12Q9Y4X4 402 aa10.08□□□□□ -0.8
PNKP-202ENST00000593706 SRRM2Q9UQ35 2752 aaKnown RBP10.08□□□□□ -0.8
PNKP-202ENST00000593706 VPS13BQ7Z7G8 4022 aa10.07□□□□□ -0.8
PNKP-202ENST00000593706 PGPA6NDG6 321 aa10.07□□□□□ -0.8
PNKP-202ENST00000593706 SPINK4O60575 86 aa10.07□□□□□ -0.8
PNKP-202ENST00000593706 GCHFRP30047 84 aa10.07□□□□□ -0.8
PNKP-202ENST00000593706 NFE4Q86UQ8 179 aa10.07□□□□□ -0.8
PNKP-202ENST00000593706 TVP23CQ96ET8 276 aa10.07□□□□□ -0.8
PNKP-202ENST00000593706 HYLS1Q96M11 299 aa10.07□□□□□ -0.8
PNKP-202ENST00000593706 MRPL16Q9NX20 251 aaKnown RBP10.07□□□□□ -0.8
PNKP-202ENST00000593706 MBP02144 154 aa10.06□□□□□ -0.8
PNKP-202ENST00000593706 DNAH10OSP0CZ25 163 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms