RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 C8orf49Q96NF6 230 aa16.32■□□□□ 0.2
LSM4-202ENST00000593564 EREGO14944 169 aa16.31■□□□□ 0.2
LSM4-202ENST00000593564 OR10J4P0C629 311 aa16.31■□□□□ 0.2
LSM4-202ENST00000593564 PHYHIPLQ96FC7 376 aa16.31■□□□□ 0.2
LSM4-202ENST00000593564 NDUFA13Q9P0J0 144 aa16.31■□□□□ 0.2
LSM4-202ENST00000593564 E5RGE8 158 aa16.3■□□□□ 0.2
LSM4-202ENST00000593564 ERVFC1-1P60608 527 aa16.3■□□□□ 0.2
LSM4-202ENST00000593564 ZNF266Q14584 549 aa16.3■□□□□ 0.2
LSM4-202ENST00000593564 CDPF1Q6NVV7 123 aa16.3■□□□□ 0.2
LSM4-202ENST00000593564 MZT2BQ6NZ67 158 aa16.3■□□□□ 0.2
LSM4-202ENST00000593564 NEGR1Q7Z3B1 354 aa16.3■□□□□ 0.2
LSM4-202ENST00000593564 NFE4Q86UQ8 179 aa16.3■□□□□ 0.2
LSM4-202ENST00000593564 WDR61Q9GZS3 305 aaKnown RBP16.3■□□□□ 0.2
LSM4-202ENST00000593564 RBAKDNA6NC62 111 aa16.29■□□□□ 0.2
LSM4-202ENST00000593564 PRAF2O60831 178 aa16.29■□□□□ 0.2
LSM4-202ENST00000593564 CSN1S1P47710 185 aa16.29■□□□□ 0.2
LSM4-202ENST00000593564 OR5AC2Q9NZP5 309 aa16.29■□□□□ 0.2
LSM4-202ENST00000593564 IQCF2Q8IXL9 164 aa16.28■□□□□ 0.2
LSM4-202ENST00000593564 LYPD1Q8N2G4 141 aa16.28■□□□□ 0.2
LSM4-202ENST00000593564 NMES1Q9C002 83 aa16.28■□□□□ 0.2
LSM4-202ENST00000593564 PTTG2Q9NZH5 202 aa16.28■□□□□ 0.2
LSM4-202ENST00000593564 TNFRSF18Q9Y5U5 241 aa16.28■□□□□ 0.2
LSM4-202ENST00000593564 TRGV4A0A0C4DH28 118 aa16.27■□□□□ 0.2
LSM4-202ENST00000593564 SIX6O95475 246 aa16.27■□□□□ 0.2
LSM4-202ENST00000593564 ASAH1Q13510 395 aa16.27■□□□□ 0.2
LSM4-202ENST00000593564 MUC21Q5SSG8 566 aa16.27■□□□□ 0.2
LSM4-202ENST00000593564 MDFICQ9P1T7 246 aa16.27■□□□□ 0.2
LSM4-202ENST00000593564 TRAV9-2A0A087WT02 112 aa16.26■□□□□ 0.19
LSM4-202ENST00000593564 C17orf112F2Z3M2 114 aa16.26■□□□□ 0.19
LSM4-202ENST00000593564 H0YIZ8 118 aa16.26■□□□□ 0.19
LSM4-202ENST00000593564 OR7C2O60412 319 aa16.26■□□□□ 0.19
LSM4-202ENST00000593564 RANP62826 216 aaKnown RBP16.26■□□□□ 0.19
LSM4-202ENST00000593564 OR10G4Q8NGN3 311 aa16.26■□□□□ 0.19
LSM4-202ENST00000593564 LY96Q9Y6Y9 160 aa16.26■□□□□ 0.19
LSM4-202ENST00000593564 EPM2AB3EWF7 344 aa16.25■□□□□ 0.19
LSM4-202ENST00000593564 K7EP13 123 aa16.25■□□□□ 0.19
LSM4-202ENST00000593564 K7EQD1 137 aa16.25■□□□□ 0.19
LSM4-202ENST00000593564 SRIP30626 198 aa16.25■□□□□ 0.19
LSM4-202ENST00000593564 LRRC37A5PQ49AS3 106 aa16.25■□□□□ 0.19
LSM4-202ENST00000593564 Q6AWC8 147 aa16.25■□□□□ 0.19
LSM4-202ENST00000593564 RASL10AQ92737 203 aa16.25■□□□□ 0.19
LSM4-202ENST00000593564 SPXQ9BT56 116 aa16.25■□□□□ 0.19
LSM4-202ENST00000593564 LENEPQ9Y5L5 61 aa16.25■□□□□ 0.19
LSM4-202ENST00000593564 SFTA3P0C7M3 94 aa16.24■□□□□ 0.19
LSM4-202ENST00000593564 FUSP35637 526 aaKnown RBP eCLIP16.24■□□□□ 0.19
LSM4-202ENST00000593564 UBE2L3P68036 154 aaKnown RBP16.24■□□□□ 0.19
LSM4-202ENST00000593564 LINC00299Q6ZSB3 139 aa16.24■□□□□ 0.19
LSM4-202ENST00000593564 ZNF479Q96JC4 524 aa16.24■□□□□ 0.19
LSM4-202ENST00000593564 TRGV11A0A075B6L2 103 aa16.23■□□□□ 0.19
LSM4-202ENST00000593564 A0A087WTM6 91 aa16.23■□□□□ 0.19
LSM4-202ENST00000593564 TMEM183BQ1AE95 376 aa16.23■□□□□ 0.19
LSM4-202ENST00000593564 TMEM183AQ8IXX5 376 aa16.23■□□□□ 0.19
LSM4-202ENST00000593564 PCNPQ8WW12 178 aaKnown RBP16.23■□□□□ 0.19
LSM4-202ENST00000593564 DIRC3C9JPN6 131 aa16.22■□□□□ 0.19
LSM4-202ENST00000593564 ORM1P02763 201 aa16.22■□□□□ 0.19
LSM4-202ENST00000593564 DNAH10OSP0CZ25 163 aa16.22■□□□□ 0.19
LSM4-202ENST00000593564 CYCSP99999 105 aaKnown RBP16.22■□□□□ 0.19
LSM4-202ENST00000593564 FAM159AQ6UWV7 190 aa16.22■□□□□ 0.19
LSM4-202ENST00000593564 ENKURQ8TC29 256 aa16.22■□□□□ 0.19
LSM4-202ENST00000593564 TMED6Q8WW62 240 aa16.22■□□□□ 0.19
LSM4-202ENST00000593564 ATP5SQ99766 215 aa16.22■□□□□ 0.19
LSM4-202ENST00000593564 MSRB1Q9NZV6 116 aa16.22■□□□□ 0.19
LSM4-202ENST00000593564 GYPEP15421 78 aa16.21■□□□□ 0.19
LSM4-202ENST00000593564 XGP55808 180 aa16.21■□□□□ 0.19
LSM4-202ENST00000593564 TDRG1Q3Y452 100 aa16.21■□□□□ 0.19
LSM4-202ENST00000593564 WFDC10BQ8IUB3 73 aa16.21■□□□□ 0.19
LSM4-202ENST00000593564 EVI2AP22794 236 aa16.2■□□□□ 0.18
LSM4-202ENST00000593564 KHDC3LQ587J8 217 aa16.2■□□□□ 0.18
LSM4-202ENST00000593564 FFAR4Q5NUL3 377 aa16.2■□□□□ 0.18
LSM4-202ENST00000593564 S100ZQ8WXG8 99 aa16.2■□□□□ 0.18
LSM4-202ENST00000593564 TRAV4A0A0B4J268 109 aa16.19■□□□□ 0.18
LSM4-202ENST00000593564 TAS2R45P59539 299 aa16.19■□□□□ 0.18
LSM4-202ENST00000593564 TXNDC17Q9BRA2 123 aa16.19■□□□□ 0.18
LSM4-202ENST00000593564 C9JCJ5 164 aa16.18■□□□□ 0.18
LSM4-202ENST00000593564 IFNA5P01569 189 aa16.18■□□□□ 0.18
LSM4-202ENST00000593564 PPP1R1CQ8WVI7 109 aa16.18■□□□□ 0.18
LSM4-202ENST00000593564 OTORQ9NRC9 128 aa16.18■□□□□ 0.18
LSM4-202ENST00000593564 H2BFSP57053 126 aa16.17■□□□□ 0.18
LSM4-202ENST00000593564 KRTAP10-1P60331 282 aa16.17■□□□□ 0.18
LSM4-202ENST00000593564 HYLS1Q96M11 299 aa16.17■□□□□ 0.18
LSM4-202ENST00000593564 NAGKQ9UJ70 344 aa16.17■□□□□ 0.18
LSM4-202ENST00000593564 HSPB11Q9Y547 144 aa16.17■□□□□ 0.18
LSM4-202ENST00000593564 C10orf126Q8N4M7 172 aa16.16■□□□□ 0.18
LSM4-202ENST00000593564 OR4C5Q8NGB2 326 aa16.16■□□□□ 0.18
LSM4-202ENST00000593564 IGHV3-16A0A0C4DH30 117 aa16.15■□□□□ 0.18
LSM4-202ENST00000593564 M0R2P5 195 aa16.15■□□□□ 0.18
LSM4-202ENST00000593564 CRYGDP07320 174 aa16.15■□□□□ 0.18
LSM4-202ENST00000593564 CMTM2Q8TAZ6 248 aa16.15■□□□□ 0.18
LSM4-202ENST00000593564 SCGB1C1Q8TD33 95 aa16.15■□□□□ 0.18
LSM4-202ENST00000593564 DMBT1Q9UGM3 2413 aaPredicted RBP16.15■□□□□ 0.18
LSM4-202ENST00000593564 VPS13BQ7Z7G8 4022 aa16.14■□□□□ 0.17
LSM4-202ENST00000593564 PGPA6NDG6 321 aa16.14■□□□□ 0.17
LSM4-202ENST00000593564 INMT-MINDY4F8WBC2 141 aa16.14■□□□□ 0.17
LSM4-202ENST00000593564 GNRH2O43555 120 aa16.14■□□□□ 0.17
LSM4-202ENST00000593564 UPK1BO75841 260 aa16.14■□□□□ 0.17
LSM4-202ENST00000593564 SH2D6Q7Z4S9 175 aa16.14■□□□□ 0.17
LSM4-202ENST00000593564 ARL6IP6Q8N6S5 226 aa16.14■□□□□ 0.17
LSM4-202ENST00000593564 MBD2Q9UBB5 411 aa16.14■□□□□ 0.17
LSM4-202ENST00000593564 TRAV21A0A0B4J279 112 aa16.13■□□□□ 0.17
LSM4-202ENST00000593564 PET100P0DJ07 73 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms