RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 WFDC10BQ8IUB3 73 aa11.09□□□□□ -0.63
LIG1-205ENST00000593425 GPN1Q9HCN4 374 aaPredicted RBP11.09□□□□□ -0.63
LIG1-205ENST00000593425 SFTA3P0C7M3 94 aa11.08□□□□□ -0.64
LIG1-205ENST00000593425 SLAQ13239 276 aa11.08□□□□□ -0.64
LIG1-205ENST00000593425 ATP6V1FQ16864 119 aa11.08□□□□□ -0.64
LIG1-205ENST00000593425 MUC21Q5SSG8 566 aa11.08□□□□□ -0.64
LIG1-205ENST00000593425 THAP6Q8TBB0 222 aa11.08□□□□□ -0.64
LIG1-205ENST00000593425 LY96Q9Y6Y9 160 aa11.08□□□□□ -0.64
LIG1-205ENST00000593425 E5RGE8 158 aa11.07□□□□□ -0.64
LIG1-205ENST00000593425 K7EQD1 137 aa11.07□□□□□ -0.64
LIG1-205ENST00000593425 OR10J4P0C629 311 aa11.07□□□□□ -0.64
LIG1-205ENST00000593425 NBEAP1P0C6P0 100 aa11.07□□□□□ -0.64
LIG1-205ENST00000593425 ZNF138P52744 262 aa11.07□□□□□ -0.64
LIG1-205ENST00000593425 FXYD5Q96DB9 178 aa11.07□□□□□ -0.64
LIG1-205ENST00000593425 PHYHIPLQ96FC7 376 aa11.07□□□□□ -0.64
LIG1-205ENST00000593425 ZNF479Q96JC4 524 aa11.07□□□□□ -0.64
LIG1-205ENST00000593425 MRPL32Q9BYC8 188 aaKnown RBP11.07□□□□□ -0.64
LIG1-205ENST00000593425 OR51M1Q9H341 326 aa11.07□□□□□ -0.64
LIG1-205ENST00000593425 MDFICQ9P1T7 246 aa11.07□□□□□ -0.64
LIG1-205ENST00000593425 TRGV4A0A0C4DH28 118 aa11.06□□□□□ -0.64
LIG1-205ENST00000593425 SRIP30626 198 aa11.06□□□□□ -0.64
LIG1-205ENST00000593425 NHLH2Q02577 135 aa11.06□□□□□ -0.64
LIG1-205ENST00000593425 FRZBQ92765 325 aa11.06□□□□□ -0.64
LIG1-205ENST00000593425 MSRB1Q9NZV6 116 aa11.06□□□□□ -0.64
LIG1-205ENST00000593425 TRAV9-2A0A087WT02 112 aa11.05□□□□□ -0.64
LIG1-205ENST00000593425 TRBV7-9A0A0J9YWB2 115 aa11.05□□□□□ -0.64
LIG1-205ENST00000593425 IFNA5P01569 189 aa11.05□□□□□ -0.64
LIG1-205ENST00000593425 H2AFB2P0C5Z0 115 aa11.05□□□□□ -0.64
LIG1-205ENST00000593425 GYPEP15421 78 aa11.05□□□□□ -0.64
LIG1-205ENST00000593425 PAXXQ9BUH6 204 aa11.05□□□□□ -0.64
LIG1-205ENST00000593425 SMR3BP02814 79 aaPredicted RBP11.04□□□□□ -0.64
LIG1-205ENST00000593425 ZNF266Q14584 549 aa11.04□□□□□ -0.64
LIG1-205ENST00000593425 IQCF2Q8IXL9 164 aa11.04□□□□□ -0.64
LIG1-205ENST00000593425 OR10G4Q8NGN3 311 aa11.04□□□□□ -0.64
LIG1-205ENST00000593425 OR5C1Q8NGR4 320 aa11.04□□□□□ -0.64
LIG1-205ENST00000593425 VPS13BQ7Z7G8 4022 aa11.04□□□□□ -0.64
LIG1-205ENST00000593425 EVI2AP22794 236 aa11.03□□□□□ -0.64
LIG1-205ENST00000593425 HAMPP81172 84 aa11.03□□□□□ -0.64
LIG1-205ENST00000593425 TMEM183BQ1AE95 376 aa11.03□□□□□ -0.64
LIG1-205ENST00000593425 TMEM183AQ8IXX5 376 aa11.03□□□□□ -0.64
LIG1-205ENST00000593425 PCNPQ8WW12 178 aaKnown RBP11.03□□□□□ -0.64
LIG1-205ENST00000593425 RASL10AQ92737 203 aa11.03□□□□□ -0.64
LIG1-205ENST00000593425 LOC100131303A0A0U1RQF7 123 aa11.02□□□□□ -0.65
LIG1-205ENST00000593425 GCSHP23434 173 aa11.02□□□□□ -0.65
LIG1-205ENST00000593425 RANP62826 216 aaKnown RBP11.02□□□□□ -0.65
LIG1-205ENST00000593425 Q6AWC8 147 aa11.02□□□□□ -0.65
LIG1-205ENST00000593425 RBAKDNA6NC62 111 aa11.01□□□□□ -0.65
LIG1-205ENST00000593425 K7EP13 123 aa11.01□□□□□ -0.65
LIG1-205ENST00000593425 OR7C2O60412 319 aa11.01□□□□□ -0.65
LIG1-205ENST00000593425 ORM1P02763 201 aa11.01□□□□□ -0.65
LIG1-205ENST00000593425 SPXQ9BT56 116 aa11.01□□□□□ -0.65
LIG1-205ENST00000593425 WDR61Q9GZS3 305 aaKnown RBP11.01□□□□□ -0.65
LIG1-205ENST00000593425 SLC25A31Q9H0C2 315 aa11.01□□□□□ -0.65
LIG1-205ENST00000593425 OR5AC2Q9NZP5 309 aa11.01□□□□□ -0.65
LIG1-205ENST00000593425 MYCBP2O75592 4640 aa11.01□□□□□ -0.65
LIG1-205ENST00000593425 TRGV11A0A075B6L2 103 aa11□□□□□ -0.65
LIG1-205ENST00000593425 SIX6O95475 246 aa11□□□□□ -0.65
LIG1-205ENST00000593425 CRYGDP07320 174 aa11□□□□□ -0.65
LIG1-205ENST00000593425 CSN1S1P47710 185 aa11□□□□□ -0.65
LIG1-205ENST00000593425 FAM159AQ6UWV7 190 aa11□□□□□ -0.65
LIG1-205ENST00000593425 TRAV4A0A0B4J268 109 aa10.99□□□□□ -0.65
LIG1-205ENST00000593425 FAM240BA0A1B0GVZ2 78 aa10.99□□□□□ -0.65
LIG1-205ENST00000593425 C9JCJ5 164 aa10.99□□□□□ -0.65
LIG1-205ENST00000593425 DIRC3C9JPN6 131 aa10.99□□□□□ -0.65
LIG1-205ENST00000593425 H0YIZ8 118 aa10.99□□□□□ -0.65
LIG1-205ENST00000593425 UBE2L3P68036 154 aaKnown RBP10.99□□□□□ -0.65
LIG1-205ENST00000593425 LRRC37A5PQ49AS3 106 aa10.99□□□□□ -0.65
LIG1-205ENST00000593425 TXNDC17Q9BRA2 123 aa10.99□□□□□ -0.65
LIG1-205ENST00000593425 KCNIP2Q9NS61 270 aa10.99□□□□□ -0.65
LIG1-205ENST00000593425 NAGKQ9UJ70 344 aa10.99□□□□□ -0.65
LIG1-205ENST00000593425 LRCOL1A6NCL2 159 aa10.98□□□□□ -0.65
LIG1-205ENST00000593425 EIF3GO75821 320 aaKnown RBP eCLIP10.98□□□□□ -0.65
LIG1-205ENST00000593425 C10orf126Q8N4M7 172 aa10.98□□□□□ -0.65
LIG1-205ENST00000593425 OR4C5Q8NGB2 326 aa10.98□□□□□ -0.65
LIG1-205ENST00000593425 CCDC32Q9BV29 185 aa10.98□□□□□ -0.65
LIG1-205ENST00000593425 LENEPQ9Y5L5 61 aa10.98□□□□□ -0.65
LIG1-205ENST00000593425 DMBT1Q9UGM3 2413 aaPredicted RBP10.97□□□□□ -0.65
LIG1-205ENST00000593425 IGLV5-52A0A0A0MRZ9 124 aa10.97□□□□□ -0.65
LIG1-205ENST00000593425 GNRH2O43555 120 aa10.97□□□□□ -0.65
LIG1-205ENST00000593425 TDRG1Q3Y452 100 aa10.97□□□□□ -0.65
LIG1-205ENST00000593425 DNAH8Q96JB1 4490 aa10.96□□□□□ -0.65
LIG1-205ENST00000593425 IGHV3-16A0A0C4DH30 117 aa10.96□□□□□ -0.65
LIG1-205ENST00000593425 IGHV3-38A0A0C4DH36 116 aa10.96□□□□□ -0.65
LIG1-205ENST00000593425 C17orf112F2Z3M2 114 aa10.96□□□□□ -0.65
LIG1-205ENST00000593425 TYMSP04818 313 aa10.96□□□□□ -0.65
LIG1-205ENST00000593425 HYLS1Q96M11 299 aa10.96□□□□□ -0.65
LIG1-205ENST00000593425 RPH3ALQ9UNE2 315 aa10.96□□□□□ -0.65
LIG1-205ENST00000593425 M0R2P5 195 aa10.95□□□□□ -0.66
LIG1-205ENST00000593425 PSCAO43653 123 aa10.95□□□□□ -0.66
LIG1-205ENST00000593425 KHDC3LQ587J8 217 aa10.95□□□□□ -0.66
LIG1-205ENST00000593425 FFAR4Q5NUL3 377 aa10.95□□□□□ -0.66
LIG1-205ENST00000593425 NHLRC2Q8NBF2 726 aa10.95□□□□□ -0.66
LIG1-205ENST00000593425 TMED6Q8WW62 240 aa10.95□□□□□ -0.66
LIG1-205ENST00000593425 TMEM70Q9BUB7 260 aa10.95□□□□□ -0.66
LIG1-205ENST00000593425 NMES1Q9C002 83 aa10.95□□□□□ -0.66
LIG1-205ENST00000593425 F6UZH7 168 aa10.94□□□□□ -0.66
LIG1-205ENST00000593425 FAM229AH3BQW9 127 aa10.94□□□□□ -0.66
LIG1-205ENST00000593425 GATA1P15976 413 aaPredicted RBP10.94□□□□□ -0.66
LIG1-205ENST00000593425 PPT1P50897 306 aa10.94□□□□□ -0.66
LIG1-205ENST00000593425 TIRAPP58753 221 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms