RNA–Protein interactions for RNA: ENST00000593267.2

CACNA1A-213, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 2

Gene CACNA1A, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-213ENST00000593267 ERVFC1-1P60608 527 aa8.54□□□□□ -1.04
CACNA1A-213ENST00000593267 IBA57Q5T440 356 aaKnown RBP8.54□□□□□ -1.04
CACNA1A-213ENST00000593267 AMTNQ6UX39 209 aa8.54□□□□□ -1.04
CACNA1A-213ENST00000593267 ZFAND2AQ8N6M9 145 aa8.54□□□□□ -1.04
CACNA1A-213ENST00000593267 C15orf54Q8N8G6 183 aa8.54□□□□□ -1.04
CACNA1A-213ENST00000593267 OR10G8Q8NGN5 311 aa8.54□□□□□ -1.04
CACNA1A-213ENST00000593267 RNASE7Q9H1E1 156 aaKnown RBP8.54□□□□□ -1.04
CACNA1A-213ENST00000593267 C19orf73Q9NVV2 129 aa8.54□□□□□ -1.04
CACNA1A-213ENST00000593267 CD7P09564 240 aa8.53□□□□□ -1.04
CACNA1A-213ENST00000593267 CRIP1P50238 77 aa8.53□□□□□ -1.04
CACNA1A-213ENST00000593267 ZNF80P51504 273 aaPredicted RBP8.53□□□□□ -1.04
CACNA1A-213ENST00000593267 ZNF124Q15973 351 aa8.53□□□□□ -1.04
CACNA1A-213ENST00000593267 ACTL10Q5JWF8 245 aa8.53□□□□□ -1.04
CACNA1A-213ENST00000593267 NUDT10Q8NFP7 164 aa8.53□□□□□ -1.04
CACNA1A-213ENST00000593267 NUDT11Q96G61 164 aa8.53□□□□□ -1.04
CACNA1A-213ENST00000593267 CLUHP3Q96NS8 147 aa8.53□□□□□ -1.04
CACNA1A-213ENST00000593267 V9GYV3 84 aa8.53□□□□□ -1.04
CACNA1A-213ENST00000593267 VWFP04275 2813 aa8.52□□□□□ -1.05
CACNA1A-213ENST00000593267 KLLNB2CW77 178 aa8.52□□□□□ -1.05
CACNA1A-213ENST00000593267 H7BYZ3 331 aa8.52□□□□□ -1.05
CACNA1A-213ENST00000593267 SH2D1AO60880 128 aa8.52□□□□□ -1.05
CACNA1A-213ENST00000593267 LEPP41159 167 aa8.52□□□□□ -1.05
CACNA1A-213ENST00000593267 FAM162BQ5T6X4 162 aa8.52□□□□□ -1.05
CACNA1A-213ENST00000593267 PRR9Q5T870 116 aa8.52□□□□□ -1.05
CACNA1A-213ENST00000593267 CBLN2Q8IUK8 224 aa8.52□□□□□ -1.05
CACNA1A-213ENST00000593267 OR4B1Q8NGF8 309 aa8.52□□□□□ -1.05
CACNA1A-213ENST00000593267 RBMY1BA6NDE4 496 aaKnown RBP8.51□□□□□ -1.05
CACNA1A-213ENST00000593267 CXorf65A6NEN9 183 aa8.51□□□□□ -1.05
CACNA1A-213ENST00000593267 RBMY1EA6NEQ0 496 aaKnown RBP8.51□□□□□ -1.05
CACNA1A-213ENST00000593267 GATCO43716 136 aaKnown RBP8.51□□□□□ -1.05
CACNA1A-213ENST00000593267 P01737 135 aa8.51□□□□□ -1.05
CACNA1A-213ENST00000593267 PFN1P07737 140 aaKnown RBP8.51□□□□□ -1.05
CACNA1A-213ENST00000593267 RBMY1DP0C7P1 496 aaKnown RBP8.51□□□□□ -1.05
CACNA1A-213ENST00000593267 CT83Q5H943 113 aa8.51□□□□□ -1.05
CACNA1A-213ENST00000593267 Q6AWC8 147 aa8.51□□□□□ -1.05
CACNA1A-213ENST00000593267 TMEM88Q6PEY1 159 aa8.51□□□□□ -1.05
CACNA1A-213ENST00000593267 DAZAP1Q96EP5 407 aaKnown RBP8.51□□□□□ -1.05
CACNA1A-213ENST00000593267 RPP21Q9H633 154 aaKnown RBP8.51□□□□□ -1.05
CACNA1A-213ENST00000593267 TUBA4BQ9H853 241 aa8.51□□□□□ -1.05
CACNA1A-213ENST00000593267 SMCO4Q9NRQ5 59 aa8.51□□□□□ -1.05
CACNA1A-213ENST00000593267 FABP5P3A8MUU1 101 aa8.5□□□□□ -1.05
CACNA1A-213ENST00000593267 ZNF705GA8MUZ8 300 aaPredicted RBP8.5□□□□□ -1.05
CACNA1A-213ENST00000593267 IGKV3-20P01619 116 aa8.5□□□□□ -1.05
CACNA1A-213ENST00000593267 GPX1P07203 203 aa8.5□□□□□ -1.05
CACNA1A-213ENST00000593267 TSPOP30536 169 aa8.5□□□□□ -1.05
CACNA1A-213ENST00000593267 CDKN1BP46527 198 aa8.5□□□□□ -1.05
CACNA1A-213ENST00000593267 BTN1A1Q13410 526 aa8.5□□□□□ -1.05
CACNA1A-213ENST00000593267 TRPT1Q86TN4 253 aaKnown RBP8.5□□□□□ -1.05
CACNA1A-213ENST00000593267 GTSCR1Q86UQ5 136 aa8.5□□□□□ -1.05
CACNA1A-213ENST00000593267 YPEL4Q96NS1 127 aa8.5□□□□□ -1.05
CACNA1A-213ENST00000593267 IMMP2LQ96T52 175 aa8.5□□□□□ -1.05
CACNA1A-213ENST00000593267 M0R2Z0 102 aa8.49□□□□□ -1.05
CACNA1A-213ENST00000593267 KIR3DS1Q14943 382 aa8.49□□□□□ -1.05
CACNA1A-213ENST00000593267 SPINK13Q1W4C9 94 aa8.49□□□□□ -1.05
CACNA1A-213ENST00000593267 LINC01559Q495D7 138 aa8.49□□□□□ -1.05
CACNA1A-213ENST00000593267 STHQ8IWL8 128 aa8.49□□□□□ -1.05
CACNA1A-213ENST00000593267 WFDC10AQ9H1F0 79 aa8.49□□□□□ -1.05
CACNA1A-213ENST00000593267 IL36BQ9NZH7 164 aa8.49□□□□□ -1.05
CACNA1A-213ENST00000593267 NOTCH1P46531 2555 aa8.48□□□□□ -1.05
CACNA1A-213ENST00000593267 TRAV21A0A0B4J279 112 aa8.48□□□□□ -1.05
CACNA1A-213ENST00000593267 SMIM27A0A1W2PRY6 76 aa8.48□□□□□ -1.05
CACNA1A-213ENST00000593267 C7orf71A4D174 169 aa8.48□□□□□ -1.05
CACNA1A-213ENST00000593267 J3KRW8 73 aa8.48□□□□□ -1.05
CACNA1A-213ENST00000593267 CA1P00915 261 aaPredicted RBP8.48□□□□□ -1.05
CACNA1A-213ENST00000593267 EGFEM1PQ0D2K5 195 aa8.48□□□□□ -1.05
CACNA1A-213ENST00000593267 ELOBQ15370 118 aa8.48□□□□□ -1.05
CACNA1A-213ENST00000593267 GFI1BQ5VTD9 330 aa8.48□□□□□ -1.05
CACNA1A-213ENST00000593267 OR2D3Q8NGH3 330 aa8.48□□□□□ -1.05
CACNA1A-213ENST00000593267 TSKUQ8WUA8 353 aa8.48□□□□□ -1.05
CACNA1A-213ENST00000593267 GFRA4Q9GZZ7 299 aa8.48□□□□□ -1.05
CACNA1A-213ENST00000593267 C11orf21Q9P2W6 132 aa8.48□□□□□ -1.05
CACNA1A-213ENST00000593267 AGRNO00468 2067 aa8.47□□□□□ -1.05
CACNA1A-213ENST00000593267 TMEM189A5PLL7 270 aa8.47□□□□□ -1.05
CACNA1A-213ENST00000593267 A8MWL6 223 aa8.47□□□□□ -1.05
CACNA1A-213ENST00000593267 CRXO43186 299 aaPredicted RBP8.47□□□□□ -1.05
CACNA1A-213ENST00000593267 ZNF324O75467 553 aaPredicted RBP8.47□□□□□ -1.05
CACNA1A-213ENST00000593267 AMBPP02760 352 aa8.47□□□□□ -1.05
CACNA1A-213ENST00000593267 S100PP25815 95 aa8.47□□□□□ -1.05
CACNA1A-213ENST00000593267 RNASE4P34096 147 aaKnown RBP8.47□□□□□ -1.05
CACNA1A-213ENST00000593267 RPL19P84098 196 aaKnown RBP8.47□□□□□ -1.05
CACNA1A-213ENST00000593267 OXLD1Q5BKU9 147 aa8.47□□□□□ -1.05
CACNA1A-213ENST00000593267 KCNIP4Q6PIL6 250 aa8.47□□□□□ -1.05
CACNA1A-213ENST00000593267 Q6ZQT7 251 aa8.47□□□□□ -1.05
CACNA1A-213ENST00000593267 URGCP-MRPS24S4R325 110 aa8.47□□□□□ -1.05
CACNA1A-213ENST00000593267 TRAV12-2A0A075B6T6 113 aa8.46□□□□□ -1.06
CACNA1A-213ENST00000593267 TRAV9-1A0A075B6T8 112 aa8.46□□□□□ -1.06
CACNA1A-213ENST00000593267 IGKV3D-20A0A0C4DH25 116 aa8.46□□□□□ -1.06
CACNA1A-213ENST00000593267 FAM231BA6NCW3 169 aa8.46□□□□□ -1.06
CACNA1A-213ENST00000593267 CXCL1P09341 107 aa8.46□□□□□ -1.06
CACNA1A-213ENST00000593267 FXYD7P58549 80 aa8.46□□□□□ -1.06
CACNA1A-213ENST00000593267 RPS20P60866 119 aaKnown RBP8.46□□□□□ -1.06
CACNA1A-213ENST00000593267 ZNF575Q86XF7 245 aa8.46□□□□□ -1.06
CACNA1A-213ENST00000593267 Q8N1Y9 231 aa8.46□□□□□ -1.06
CACNA1A-213ENST00000593267 DEFB125Q8N687 156 aa8.46□□□□□ -1.06
CACNA1A-213ENST00000593267 NEU1Q99519 415 aa8.46□□□□□ -1.06
CACNA1A-213ENST00000593267 PYGO2Q9BRQ0 406 aa8.46□□□□□ -1.06
CACNA1A-213ENST00000593267 TRBV24-1A0A075B6N3 115 aa8.45□□□□□ -1.06
CACNA1A-213ENST00000593267 TRAV12-3A0A0B4J271 114 aa8.45□□□□□ -1.06
CACNA1A-213ENST00000593267 XKRY2A2RUG3 117 aa8.45□□□□□ -1.06
CACNA1A-213ENST00000593267 COLCA2A8K830 154 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms