RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 RAB5CP51148 216 aa4.68□□□□□ -1.66
VPS4B-205ENST00000591383 NUTF2P61970 127 aaKnown RBP4.68□□□□□ -1.66
VPS4B-205ENST00000591383 ERCC8Q13216 396 aa4.68□□□□□ -1.66
VPS4B-205ENST00000591383 TMEM78Q5T7P6 136 aa4.68□□□□□ -1.66
VPS4B-205ENST00000591383 GOLT1AQ6ZVE7 132 aa4.68□□□□□ -1.66
VPS4B-205ENST00000591383 KIR2DL5AQ8N109 375 aa4.68□□□□□ -1.66
VPS4B-205ENST00000591383 KIR2DL5BQ8NHK3 375 aa4.68□□□□□ -1.66
VPS4B-205ENST00000591383 RCHY1Q96PM5 261 aa4.68□□□□□ -1.66
VPS4B-205ENST00000591383 CSTL1Q9H114 145 aa4.68□□□□□ -1.66
VPS4B-205ENST00000591383 GNG13Q9P2W3 67 aa4.68□□□□□ -1.66
VPS4B-205ENST00000591383 YTHDF2Q9Y5A9 579 aaKnown RBP4.68□□□□□ -1.66
VPS4B-205ENST00000591383 DNAH7Q8WXX0 4024 aa4.68□□□□□ -1.66
VPS4B-205ENST00000591383 TRAV12-2A0A075B6T6 113 aa4.67□□□□□ -1.66
VPS4B-205ENST00000591383 PGPA6NDG6 321 aa4.67□□□□□ -1.66
VPS4B-205ENST00000591383 TEX46H3BTG2 121 aa4.67□□□□□ -1.66
VPS4B-205ENST00000591383 IFNA1P01562 189 aa4.67□□□□□ -1.66
VPS4B-205ENST00000591383 HBE1P02100 147 aa4.67□□□□□ -1.66
VPS4B-205ENST00000591383 LEPP41159 167 aa4.67□□□□□ -1.66
VPS4B-205ENST00000591383 LINC00322Q6ZN03 302 aaPredicted RBP4.67□□□□□ -1.66
VPS4B-205ENST00000591383 LYPD1Q8N2G4 141 aa4.67□□□□□ -1.66
VPS4B-205ENST00000591383 C5orf17Q8NAS9 161 aa4.67□□□□□ -1.66
VPS4B-205ENST00000591383 VGLL1Q99990 258 aa4.67□□□□□ -1.66
VPS4B-205ENST00000591383 TM2D3Q9BRN9 247 aa4.67□□□□□ -1.66
VPS4B-205ENST00000591383 TMEM208Q9BTX3 173 aa4.67□□□□□ -1.66
VPS4B-205ENST00000591383 C1QTNF4Q9BXJ3 329 aa4.67□□□□□ -1.66
VPS4B-205ENST00000591383 TRAV8-1A0A0A6YYK1 113 aa4.66□□□□□ -1.66
VPS4B-205ENST00000591383 A0A1W2PRE2 83 aa4.66□□□□□ -1.66
VPS4B-205ENST00000591383 FAM74A7A6NL05 159 aa4.66□□□□□ -1.66
VPS4B-205ENST00000591383 F6UZH7 168 aa4.66□□□□□ -1.66
VPS4B-205ENST00000591383 K7EQM0 130 aa4.66□□□□□ -1.66
VPS4B-205ENST00000591383 PEX7O00628 323 aa4.66□□□□□ -1.66
VPS4B-205ENST00000591383 AMBPP02760 352 aa4.66□□□□□ -1.66
VPS4B-205ENST00000591383 TSPOP30536 169 aa4.66□□□□□ -1.66
VPS4B-205ENST00000591383 ATP5G3P48201 142 aa4.66□□□□□ -1.66
VPS4B-205ENST00000591383 PPT1P50897 306 aa4.66□□□□□ -1.66
VPS4B-205ENST00000591383 AMTNQ6UX39 209 aa4.66□□□□□ -1.66
VPS4B-205ENST00000591383 CYB561D1Q8N8Q1 229 aa4.66□□□□□ -1.66
VPS4B-205ENST00000591383 RXFP4Q8TDU9 374 aa4.66□□□□□ -1.66
VPS4B-205ENST00000591383 PCNPQ8WW12 178 aaKnown RBP4.66□□□□□ -1.66
VPS4B-205ENST00000591383 MBD3L1Q8WWY6 194 aa4.66□□□□□ -1.66
VPS4B-205ENST00000591383 ATG101Q9BSB4 218 aa4.66□□□□□ -1.66
VPS4B-205ENST00000591383 MANBALQ9NQG1 85 aa4.66□□□□□ -1.66
VPS4B-205ENST00000591383 MSRB1Q9NZV6 116 aa4.66□□□□□ -1.66
VPS4B-205ENST00000591383 GOLT1BQ9Y3E0 138 aa4.66□□□□□ -1.66
VPS4B-205ENST00000591383 U3KQK5 164 aa4.66□□□□□ -1.66
VPS4B-205ENST00000591383 A8MTW9 85 aa4.65□□□□□ -1.67
VPS4B-205ENST00000591383 C11orf94C9JXX5 98 aa4.65□□□□□ -1.67
VPS4B-205ENST00000591383 TCRAP04437 139 aa4.65□□□□□ -1.67
VPS4B-205ENST00000591383 GIG44P09565 113 aaPredicted RBP4.65□□□□□ -1.67
VPS4B-205ENST00000591383 CT45A10P0DMU9 189 aa4.65□□□□□ -1.67
VPS4B-205ENST00000591383 AKR1C3P42330 323 aa4.65□□□□□ -1.67
VPS4B-205ENST00000591383 CDKN1BP46527 198 aa4.65□□□□□ -1.67
VPS4B-205ENST00000591383 ZNF138P52744 262 aa4.65□□□□□ -1.67
VPS4B-205ENST00000591383 BTN1A1Q13410 526 aa4.65□□□□□ -1.67
VPS4B-205ENST00000591383 GFI1BQ5VTD9 330 aa4.65□□□□□ -1.67
VPS4B-205ENST00000591383 Q86TA4 180 aa4.65□□□□□ -1.67
VPS4B-205ENST00000591383 OR11H2Q8NH07 326 aa4.65□□□□□ -1.67
VPS4B-205ENST00000591383 SUN5Q8TC36 379 aa4.65□□□□□ -1.67
VPS4B-205ENST00000591383 SGK494Q96LW2 274 aa4.65□□□□□ -1.67
VPS4B-205ENST00000591383 IGF2BP2-AS1Q96M15 143 aa4.65□□□□□ -1.67
VPS4B-205ENST00000591383 ODF3Q96PU9 254 aa4.65□□□□□ -1.67
VPS4B-205ENST00000591383 OVOL2Q9BRP0 275 aa4.65□□□□□ -1.67
VPS4B-205ENST00000591383 NDFIP1Q9BT67 221 aa4.65□□□□□ -1.67
VPS4B-205ENST00000591383 TP53TG1Q9Y2A0 90 aa4.65□□□□□ -1.67
VPS4B-205ENST00000591383 ARL2-SNX15V9GYD0 113 aa4.65□□□□□ -1.67
VPS4B-205ENST00000591383 TRAV1-1A0A0B4J248 108 aa4.64□□□□□ -1.67
VPS4B-205ENST00000591383 TRAV12-3A0A0B4J271 114 aa4.64□□□□□ -1.67
VPS4B-205ENST00000591383 SERTM2A0A1B0GWG4 89 aa4.64□□□□□ -1.67
VPS4B-205ENST00000591383 C7orf71A4D174 169 aa4.64□□□□□ -1.67
VPS4B-205ENST00000591383 RBAKDNA6NC62 111 aa4.64□□□□□ -1.67
VPS4B-205ENST00000591383 DEFB4AO15263 64 aa4.64□□□□□ -1.67
VPS4B-205ENST00000591383 GPX1P07203 203 aa4.64□□□□□ -1.67
VPS4B-205ENST00000591383 RBMY1A1P0DJD3 496 aaKnown RBP4.64□□□□□ -1.67
VPS4B-205ENST00000591383 RBMY1CP0DJD4 496 aa4.64□□□□□ -1.67
VPS4B-205ENST00000591383 BCL2P10415 239 aa4.64□□□□□ -1.67
VPS4B-205ENST00000591383 HTN1P15515 57 aa4.64□□□□□ -1.67
VPS4B-205ENST00000591383 RNASE4P34096 147 aaKnown RBP4.64□□□□□ -1.67
VPS4B-205ENST00000591383 EMP1P54849 157 aa4.64□□□□□ -1.67
VPS4B-205ENST00000591383 UBE2G1P62253 170 aa4.64□□□□□ -1.67
VPS4B-205ENST00000591383 CCL20P78556 96 aa4.64□□□□□ -1.67
VPS4B-205ENST00000591383 RBMY1FQ15415 496 aaKnown RBP4.64□□□□□ -1.67
VPS4B-205ENST00000591383 PRR9Q5T870 116 aa4.64□□□□□ -1.67
VPS4B-205ENST00000591383 C9orf47Q6ZRZ4 202 aa4.64□□□□□ -1.67
VPS4B-205ENST00000591383 PRNTQ86SH4 94 aa4.64□□□□□ -1.67
VPS4B-205ENST00000591383 TMEM75Q8N9X5 138 aa4.64□□□□□ -1.67
VPS4B-205ENST00000591383 RARRES2Q99969 163 aa4.64□□□□□ -1.67
VPS4B-205ENST00000591383 NIPSNAP3BQ9BS92 247 aa4.64□□□□□ -1.67
VPS4B-205ENST00000591383 AGPAT4-IT1Q9H0P7 198 aa4.64□□□□□ -1.67
VPS4B-205ENST00000591383 NAGKQ9UJ70 344 aa4.64□□□□□ -1.67
VPS4B-205ENST00000591383 EPDR1Q9UM22 224 aa4.64□□□□□ -1.67
VPS4B-205ENST00000591383 IGHV4-28A0A0C4DH34 117 aa4.63□□□□□ -1.67
VPS4B-205ENST00000591383 A0A0J9YWU9 116 aa4.63□□□□□ -1.67
VPS4B-205ENST00000591383 GAGE12JA6NER3 117 aa4.63□□□□□ -1.67
VPS4B-205ENST00000591383 CEBPGP53567 150 aa4.63□□□□□ -1.67
VPS4B-205ENST00000591383 FLI1Q01543 452 aaPredicted RBP4.63□□□□□ -1.67
VPS4B-205ENST00000591383 TEX261Q6UWH6 196 aa4.63□□□□□ -1.67
VPS4B-205ENST00000591383 ZNF680Q8NEM1 530 aa4.63□□□□□ -1.67
VPS4B-205ENST00000591383 HIST1H2BAQ96A08 127 aa4.63□□□□□ -1.67
VPS4B-205ENST00000591383 LINC00477Q96M19 166 aa4.63□□□□□ -1.67
VPS4B-205ENST00000591383 LINC01587Q99440 93 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms