RNA–Protein interactions for RNA: ENST00000591316.1

CROCCP3-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 5

Gene CROCCP3, Length 1,563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-205ENST00000591316 CEBPGP53567 150 aa13.32□□□□□ -0.28
CROCCP3-205ENST00000591316 TMEM183BQ1AE95 376 aa13.32□□□□□ -0.28
CROCCP3-205ENST00000591316 Q6ZQT7 251 aa13.32□□□□□ -0.28
CROCCP3-205ENST00000591316 DERL1Q9BUN8 251 aa13.32□□□□□ -0.28
CROCCP3-205ENST00000591316 KLF12Q9Y4X4 402 aa13.32□□□□□ -0.28
CROCCP3-205ENST00000591316 NBEAL2Q6ZNJ1 2754 aa13.32□□□□□ -0.28
CROCCP3-205ENST00000591316 C7orf71A4D174 169 aa13.32□□□□□ -0.28
CROCCP3-205ENST00000591316 FBLL1A6NHQ2 334 aaKnown RBP13.32□□□□□ -0.28
CROCCP3-205ENST00000591316 RPL35P42766 123 aaKnown RBP13.32□□□□□ -0.28
CROCCP3-205ENST00000591316 CLLU1Q5K131 121 aa13.32□□□□□ -0.28
CROCCP3-205ENST00000591316 SAPCD1Q5SSQ6 148 aa13.32□□□□□ -0.28
CROCCP3-205ENST00000591316 TP53TG1Q9Y2A0 90 aa13.32□□□□□ -0.28
CROCCP3-205ENST00000591316 TRBV7-9A0A0J9YWB2 115 aa13.31□□□□□ -0.28
CROCCP3-205ENST00000591316 NHLRC2Q8NBF2 726 aa13.31□□□□□ -0.28
CROCCP3-205ENST00000591316 C11orf52Q96A22 123 aa13.31□□□□□ -0.28
CROCCP3-205ENST00000591316 NIPSNAP3BQ9BS92 247 aa13.31□□□□□ -0.28
CROCCP3-205ENST00000591316 HUWE1Q7Z6Z7 4374 aaKnown RBP13.3□□□□□ -0.28
CROCCP3-205ENST00000591316 RAB19A4D1S5 217 aa13.3□□□□□ -0.28
CROCCP3-205ENST00000591316 S100A9P06702 114 aaKnown RBP13.3□□□□□ -0.28
CROCCP3-205ENST00000591316 SRSF3P84103 164 aaKnown RBP13.3□□□□□ -0.28
CROCCP3-205ENST00000591316 Q86TA4 180 aa13.3□□□□□ -0.28
CROCCP3-205ENST00000591316 BAGE2Q86Y30 109 aa13.3□□□□□ -0.28
CROCCP3-205ENST00000591316 ZNF705GA8MUZ8 300 aaPredicted RBP13.29□□□□□ -0.28
CROCCP3-205ENST00000591316 ZNF324O75467 553 aaPredicted RBP13.29□□□□□ -0.28
CROCCP3-205ENST00000591316 ZNF674Q2M3X9 581 aa13.29□□□□□ -0.28
CROCCP3-205ENST00000591316 ZNF705AQ6ZN79 300 aaPredicted RBP13.29□□□□□ -0.28
CROCCP3-205ENST00000591316 ZFP30Q9Y2G7 519 aa13.29□□□□□ -0.28
CROCCP3-205ENST00000591316 DEFB4AO15263 64 aa13.28□□□□□ -0.28
CROCCP3-205ENST00000591316 GCGP01275 180 aa13.28□□□□□ -0.28
CROCCP3-205ENST00000591316 PEA15Q15121 130 aa13.28□□□□□ -0.28
CROCCP3-205ENST00000591316 SMUG1Q53HV7 270 aa13.28□□□□□ -0.28
CROCCP3-205ENST00000591316 X6R8D5 127 aa13.28□□□□□ -0.28
CROCCP3-205ENST00000591316 LTAP01374 205 aa13.28□□□□□ -0.28
CROCCP3-205ENST00000591316 ZNF80P51504 273 aaPredicted RBP13.28□□□□□ -0.28
CROCCP3-205ENST00000591316 TAS2R60P59551 318 aa13.28□□□□□ -0.28
CROCCP3-205ENST00000591316 TRBV6-1A0A0K0K1D8 114 aa13.27□□□□□ -0.29
CROCCP3-205ENST00000591316 C9JQL5 133 aa13.27□□□□□ -0.29
CROCCP3-205ENST00000591316 H7BYZ3 331 aa13.27□□□□□ -0.29
CROCCP3-205ENST00000591316 SRP19P09132 144 aaKnown RBP13.27□□□□□ -0.29
CROCCP3-205ENST00000591316 MUC21Q5SSG8 566 aa13.27□□□□□ -0.29
CROCCP3-205ENST00000591316 TMEM256Q8N2U0 113 aa13.27□□□□□ -0.29
CROCCP3-205ENST00000591316 C20orf144Q9BQM9 153 aa13.27□□□□□ -0.29
CROCCP3-205ENST00000591316 U3KQK5 164 aa13.27□□□□□ -0.29
CROCCP3-205ENST00000591316 TMEM250H0YL14 139 aa13.26□□□□□ -0.29
CROCCP3-205ENST00000591316 RGS13O14921 159 aa13.26□□□□□ -0.29
CROCCP3-205ENST00000591316 AZU1P20160 251 aa13.26□□□□□ -0.29
CROCCP3-205ENST00000591316 CENPWQ5EE01 88 aa13.26□□□□□ -0.29
CROCCP3-205ENST00000591316 TMEM183AQ8IXX5 376 aa13.26□□□□□ -0.29
CROCCP3-205ENST00000591316 ZC2HC1AQ96GY0 325 aa13.26□□□□□ -0.29
CROCCP3-205ENST00000591316 NAGKQ9UJ70 344 aa13.26□□□□□ -0.29
CROCCP3-205ENST00000591316 TRAV21A0A0B4J279 112 aa13.25□□□□□ -0.29
CROCCP3-205ENST00000591316 EMP1P54849 157 aa13.25□□□□□ -0.29
CROCCP3-205ENST00000591316 RRN3P1Q2M238 152 aa13.25□□□□□ -0.29
CROCCP3-205ENST00000591316 Q6AWC8 147 aa13.25□□□□□ -0.29
CROCCP3-205ENST00000591316 PARLQ9H300 379 aa13.25□□□□□ -0.29
CROCCP3-205ENST00000591316 IGHV4-28A0A0C4DH34 117 aa13.24□□□□□ -0.29
CROCCP3-205ENST00000591316 PGPEP1LA6NFU8 196 aa13.24□□□□□ -0.29
CROCCP3-205ENST00000591316 GNG4P50150 75 aa13.24□□□□□ -0.29
CROCCP3-205ENST00000591316 PYGO2Q9BRQ0 406 aa13.24□□□□□ -0.29
CROCCP3-205ENST00000591316 SMIM9A6NGZ8 99 aa13.24□□□□□ -0.29
CROCCP3-205ENST00000591316 MGST1P10620 155 aaKnown RBP13.24□□□□□ -0.29
CROCCP3-205ENST00000591316 MIFP14174 115 aa13.24□□□□□ -0.29
CROCCP3-205ENST00000591316 CRIP1P50238 77 aa13.24□□□□□ -0.29
CROCCP3-205ENST00000591316 PRR27Q6MZM9 219 aa13.24□□□□□ -0.29
CROCCP3-205ENST00000591316 NEU1Q99519 415 aa13.24□□□□□ -0.29
CROCCP3-205ENST00000591316 TGP01266 2768 aa13.23□□□□□ -0.29
CROCCP3-205ENST00000591316 IGHV1OR15-1A0A075B7D0 117 aa13.23□□□□□ -0.29
CROCCP3-205ENST00000591316 A0A0J9YWU9 116 aa13.23□□□□□ -0.29
CROCCP3-205ENST00000591316 CBY3A6NI87 242 aa13.23□□□□□ -0.29
CROCCP3-205ENST00000591316 FABP5P3A8MUU1 101 aa13.23□□□□□ -0.29
CROCCP3-205ENST00000591316 PFN1P07737 140 aaKnown RBP13.23□□□□□ -0.29
CROCCP3-205ENST00000591316 FAM159AQ6UWV7 190 aa13.23□□□□□ -0.29
CROCCP3-205ENST00000591316 Q8NAQ8 132 aa13.23□□□□□ -0.29
CROCCP3-205ENST00000591316 MLST8Q9BVC4 326 aa13.23□□□□□ -0.29
CROCCP3-205ENST00000591316 TP53TG3Q9ULZ0 132 aa13.23□□□□□ -0.29
CROCCP3-205ENST00000591316 TRBV20OR9-2A0A075B6H5 130 aa13.22□□□□□ -0.29
CROCCP3-205ENST00000591316 ZNF727A8MUV8 499 aa13.21□□□□□ -0.29
CROCCP3-205ENST00000591316 ANXA2RQ3ZCQ2 193 aa13.21□□□□□ -0.29
CROCCP3-205ENST00000591316 EIF4E3Q8N5X7 224 aaKnown RBP13.21□□□□□ -0.29
CROCCP3-205ENST00000591316 SMDT1Q9H4I9 107 aa13.21□□□□□ -0.29
CROCCP3-205ENST00000591316 GNRH2O43555 120 aa13.2□□□□□ -0.3
CROCCP3-205ENST00000591316 SH2D1AO60880 128 aa13.2□□□□□ -0.3
CROCCP3-205ENST00000591316 IGLV2-8P01709 118 aa13.2□□□□□ -0.3
CROCCP3-205ENST00000591316 FAM162BQ5T6X4 162 aa13.2□□□□□ -0.3
CROCCP3-205ENST00000591316 COX8CQ7Z4L0 72 aa13.2□□□□□ -0.3
CROCCP3-205ENST00000591316 OCC1Q8TAD7 63 aa13.2□□□□□ -0.3
CROCCP3-205ENST00000591316 SMIM7Q9BQ49 75 aa13.2□□□□□ -0.3
CROCCP3-205ENST00000591316 C11orf21Q9P2W6 132 aa13.2□□□□□ -0.3
CROCCP3-205ENST00000591316 COL7A1Q02388 2944 aa13.2□□□□□ -0.3
CROCCP3-205ENST00000591316 NDUFS6O75380 124 aaKnown RBP13.2□□□□□ -0.3
CROCCP3-205ENST00000591316 ORM1P02763 201 aa13.2□□□□□ -0.3
CROCCP3-205ENST00000591316 OR5I1Q13606 314 aa13.2□□□□□ -0.3
CROCCP3-205ENST00000591316 M0R036 132 aa13.19□□□□□ -0.3
CROCCP3-205ENST00000591316 C9JCJ5 164 aa13.18□□□□□ -0.3
CROCCP3-205ENST00000591316 COMMD7Q86VX2 200 aa13.18□□□□□ -0.3
CROCCP3-205ENST00000591316 TMEM263Q8WUH6 116 aaKnown RBP13.18□□□□□ -0.3
CROCCP3-205ENST00000591316 C16orf74Q96GX8 76 aa13.18□□□□□ -0.3
CROCCP3-205ENST00000591316 TMSB15BA0A087X1C1 80 aa13.17□□□□□ -0.3
CROCCP3-205ENST00000591316 SOHLH1Q5JUK2 328 aa13.17□□□□□ -0.3
CROCCP3-205ENST00000591316 RNASE8Q8TDE3 154 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms