RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 PSG3Q16557 428 aa8.6□□□□□ -1.03
PRKCSH-210ENST00000589990 NFE4Q86UQ8 179 aa8.6□□□□□ -1.03
PRKCSH-210ENST00000589990 KCNRGQ8N5I3 272 aa8.6□□□□□ -1.03
PRKCSH-210ENST00000589990 SYT8Q8NBV8 401 aa8.6□□□□□ -1.03
PRKCSH-210ENST00000589990 RPUSD4Q96CM3 377 aaKnown RBP8.6□□□□□ -1.03
PRKCSH-210ENST00000589990 GPR82Q96P67 336 aa8.6□□□□□ -1.03
PRKCSH-210ENST00000589990 PFDN1O60925 122 aa8.59□□□□□ -1.03
PRKCSH-210ENST00000589990 C1QBP02746 253 aa8.59□□□□□ -1.03
PRKCSH-210ENST00000589990 CXCL2P19875 107 aa8.59□□□□□ -1.03
PRKCSH-210ENST00000589990 ATP6V0CP27449 155 aa8.59□□□□□ -1.03
PRKCSH-210ENST00000589990 ZNF345Q14585 488 aa8.59□□□□□ -1.03
PRKCSH-210ENST00000589990 MORN5Q5VZ52 161 aa8.59□□□□□ -1.03
PRKCSH-210ENST00000589990 LYPD5Q6UWN5 251 aa8.59□□□□□ -1.03
PRKCSH-210ENST00000589990 WFDC10BQ8IUB3 73 aa8.59□□□□□ -1.03
PRKCSH-210ENST00000589990 ARPC5LQ9BPX5 153 aa8.59□□□□□ -1.03
PRKCSH-210ENST00000589990 MSRB1Q9NZV6 116 aa8.59□□□□□ -1.03
PRKCSH-210ENST00000589990 TIMM9Q9Y5J7 89 aa8.59□□□□□ -1.03
PRKCSH-210ENST00000589990 KANTRA0A1W2PQU2 76 aa8.58□□□□□ -1.04
PRKCSH-210ENST00000589990 LRCOL1A6NCL2 159 aa8.58□□□□□ -1.04
PRKCSH-210ENST00000589990 IGHV3-53P01767 116 aa8.58□□□□□ -1.04
PRKCSH-210ENST00000589990 CD300CQ08708 224 aa8.58□□□□□ -1.04
PRKCSH-210ENST00000589990 TMUB2Q71RG4 321 aa8.58□□□□□ -1.04
PRKCSH-210ENST00000589990 BPIFA4PQ86YQ2 179 aa8.58□□□□□ -1.04
PRKCSH-210ENST00000589990 CCDC28AQ8IWP9 274 aa8.58□□□□□ -1.04
PRKCSH-210ENST00000589990 LINC00528Q8N1L1 170 aa8.58□□□□□ -1.04
PRKCSH-210ENST00000589990 LRRC20Q8TCA0 184 aa8.58□□□□□ -1.04
PRKCSH-210ENST00000589990 HYLS1Q96M11 299 aa8.58□□□□□ -1.04
PRKCSH-210ENST00000589990 GSN-AS1Q9NRJ2 163 aa8.58□□□□□ -1.04
PRKCSH-210ENST00000589990 CYTL1Q9NRR1 136 aa8.58□□□□□ -1.04
PRKCSH-210ENST00000589990 TRGV2A0A075B6R0 118 aa8.57□□□□□ -1.04
PRKCSH-210ENST00000589990 TRAV12-3A0A0B4J271 114 aa8.57□□□□□ -1.04
PRKCSH-210ENST00000589990 H3BTX0 84 aa8.57□□□□□ -1.04
PRKCSH-210ENST00000589990 DAZ2Q13117 558 aaKnown RBP8.57□□□□□ -1.04
PRKCSH-210ENST00000589990 ACOT6Q3I5F7 207 aaPredicted RBP8.57□□□□□ -1.04
PRKCSH-210ENST00000589990 LGALSLQ3ZCW2 172 aaPredicted RBP8.57□□□□□ -1.04
PRKCSH-210ENST00000589990 MIR17HGQ75NE6 70 aa8.57□□□□□ -1.04
PRKCSH-210ENST00000589990 C11orf72Q8NBR9 251 aa8.57□□□□□ -1.04
PRKCSH-210ENST00000589990 LINC00467Q9BRT7 94 aa8.57□□□□□ -1.04
PRKCSH-210ENST00000589990 PSMG3Q9BT73 122 aaPredicted RBP8.57□□□□□ -1.04
PRKCSH-210ENST00000589990 ZNF471Q9BX82 626 aaPredicted RBP8.57□□□□□ -1.04
PRKCSH-210ENST00000589990 SH3BGRL3Q9H299 93 aa8.57□□□□□ -1.04
PRKCSH-210ENST00000589990 ICOSQ9Y6W8 199 aa8.57□□□□□ -1.04
PRKCSH-210ENST00000589990 LY96Q9Y6Y9 160 aa8.57□□□□□ -1.04
PRKCSH-210ENST00000589990 RNF213Q63HN8 5207 aa8.56□□□□□ -1.04
PRKCSH-210ENST00000589990 A0A087X0K7 114 aa8.56□□□□□ -1.04
PRKCSH-210ENST00000589990 A0A1W2PPV4 95 aa8.56□□□□□ -1.04
PRKCSH-210ENST00000589990 NPIPB6E9PJ23 425 aa8.56□□□□□ -1.04
PRKCSH-210ENST00000589990 MRPS12O15235 138 aaKnown RBP8.56□□□□□ -1.04
PRKCSH-210ENST00000589990 PAX4O43316 350 aa8.56□□□□□ -1.04
PRKCSH-210ENST00000589990 BCL2L11O43521 198 aa8.56□□□□□ -1.04
PRKCSH-210ENST00000589990 ZNF324O75467 553 aaPredicted RBP8.56□□□□□ -1.04
PRKCSH-210ENST00000589990 PLA2G1BP04054 148 aaKnown RBP8.56□□□□□ -1.04
PRKCSH-210ENST00000589990 SERF2P84101 59 aa8.56□□□□□ -1.04
PRKCSH-210ENST00000589990 ZFP69Q49AA0 526 aa8.56□□□□□ -1.04
PRKCSH-210ENST00000589990 FAM122CQ6P4D5 195 aa8.56□□□□□ -1.04
PRKCSH-210ENST00000589990 OR10G4Q8NGN3 311 aa8.56□□□□□ -1.04
PRKCSH-210ENST00000589990 OR10G9Q8NGN4 311 aa8.56□□□□□ -1.04
PRKCSH-210ENST00000589990 OR10G7Q8NGN6 311 aa8.56□□□□□ -1.04
PRKCSH-210ENST00000589990 OR2G3Q8NGZ4 309 aa8.56□□□□□ -1.04
PRKCSH-210ENST00000589990 DEFB104AQ8WTQ1 72 aa8.56□□□□□ -1.04
PRKCSH-210ENST00000589990 C20orf144Q9BQM9 153 aa8.56□□□□□ -1.04
PRKCSH-210ENST00000589990 MRPL32Q9BYC8 188 aaKnown RBP8.56□□□□□ -1.04
PRKCSH-210ENST00000589990 FUT9Q9Y231 359 aa8.56□□□□□ -1.04
PRKCSH-210ENST00000589990 TRGV1A0A0A0MS02 117 aa8.55□□□□□ -1.04
PRKCSH-210ENST00000589990 SLC17A3O00476 420 aa8.55□□□□□ -1.04
PRKCSH-210ENST00000589990 EIF3GO75821 320 aaKnown RBP eCLIP8.55□□□□□ -1.04
PRKCSH-210ENST00000589990 MBP02144 154 aa8.55□□□□□ -1.04
PRKCSH-210ENST00000589990 CT45A10P0DMU9 189 aa8.55□□□□□ -1.04
PRKCSH-210ENST00000589990 KRTAP10-4P60372 401 aaPredicted RBP8.55□□□□□ -1.04
PRKCSH-210ENST00000589990 RAB2AP61019 212 aa8.55□□□□□ -1.04
PRKCSH-210ENST00000589990 KLF12Q9Y4X4 402 aa8.55□□□□□ -1.04
PRKCSH-210ENST00000589990 H3BQ15 152 aa8.54□□□□□ -1.04
PRKCSH-210ENST00000589990 OR7C2O60412 319 aa8.54□□□□□ -1.04
PRKCSH-210ENST00000589990 PYYP10082 97 aa8.54□□□□□ -1.04
PRKCSH-210ENST00000589990 EIF5AP63241 154 aaKnown RBP8.54□□□□□ -1.04
PRKCSH-210ENST00000589990 LCN15Q6UWW0 184 aa8.54□□□□□ -1.04
PRKCSH-210ENST00000589990 BLNKQ8WV28 456 aa8.54□□□□□ -1.04
PRKCSH-210ENST00000589990 C8orf49Q96NF6 230 aa8.54□□□□□ -1.04
PRKCSH-210ENST00000589990 PAXXQ9BUH6 204 aa8.54□□□□□ -1.04
PRKCSH-210ENST00000589990 SLC25A2Q9BXI2 301 aa8.54□□□□□ -1.04
PRKCSH-210ENST00000589990 OR51M1Q9H341 326 aa8.54□□□□□ -1.04
PRKCSH-210ENST00000589990 ZNF331Q9NQX6 463 aaPredicted RBP8.54□□□□□ -1.04
PRKCSH-210ENST00000589990 TMEM14CQ9P0S9 112 aa8.54□□□□□ -1.04
PRKCSH-210ENST00000589990 HMGB3O15347 200 aaKnown RBP8.53□□□□□ -1.04
PRKCSH-210ENST00000589990 IGLC2P0DOY2 106 aa8.53□□□□□ -1.04
PRKCSH-210ENST00000589990 HIST1H1EP10412 219 aaKnown RBP8.53□□□□□ -1.04
PRKCSH-210ENST00000589990 CRYBA4P53673 196 aa8.53□□□□□ -1.04
PRKCSH-210ENST00000589990 TAS2R45P59539 299 aa8.53□□□□□ -1.04
PRKCSH-210ENST00000589990 GUK1Q16774 197 aa8.53□□□□□ -1.04
PRKCSH-210ENST00000589990 AKR1C8PQ5T2L2 129 aa8.53□□□□□ -1.04
PRKCSH-210ENST00000589990 Q8N814 137 aa8.53□□□□□ -1.04
PRKCSH-210ENST00000589990 FAM167A-AS1Q96KT0 104 aa8.53□□□□□ -1.04
PRKCSH-210ENST00000589990 ACTR3CQ9C0K3 210 aaPredicted RBP8.53□□□□□ -1.04
PRKCSH-210ENST00000589990 TRAV9-2A0A087WT02 112 aa8.52□□□□□ -1.05
PRKCSH-210ENST00000589990 CRYGDP07320 174 aa8.52□□□□□ -1.05
PRKCSH-210ENST00000589990 OR10J4P0C629 311 aa8.52□□□□□ -1.05
PRKCSH-210ENST00000589990 NBEAP1P0C6P0 100 aa8.52□□□□□ -1.05
PRKCSH-210ENST00000589990 CDC34P49427 236 aaPredicted RBP8.52□□□□□ -1.05
PRKCSH-210ENST00000589990 KHDC3LQ587J8 217 aa8.52□□□□□ -1.05
PRKCSH-210ENST00000589990 Q6ZQT7 251 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms