RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 HLA-DMBP28068 263 aa18.59■□□□□ 0.57
RFX1-205ENST00000589239 C16orf92Q96LL3 132 aa18.59■□□□□ 0.57
RFX1-205ENST00000589239 NOTCH3Q9UM47 2321 aa18.59■□□□□ 0.57
RFX1-205ENST00000589239 TRAV8-2A0A0B4J237 113 aa18.59■□□□□ 0.57
RFX1-205ENST00000589239 PSG9Q00887 426 aa18.59■□□□□ 0.57
RFX1-205ENST00000589239 BATFQ16520 125 aa18.59■□□□□ 0.57
RFX1-205ENST00000589239 RNF182Q8N6D2 247 aa18.59■□□□□ 0.57
RFX1-205ENST00000589239 IZUMO1RA6ND01 250 aa18.58■□□□□ 0.57
RFX1-205ENST00000589239 CRISP2P16562 243 aa18.58■□□□□ 0.57
RFX1-205ENST00000589239 RIPPLY3P57055 190 aa18.58■□□□□ 0.57
RFX1-205ENST00000589239 LYPD1Q8N2G4 141 aa18.58■□□□□ 0.57
RFX1-205ENST00000589239 OR4B1Q8NGF8 309 aa18.58■□□□□ 0.57
RFX1-205ENST00000589239 SLC50A1Q9BRV3 221 aa18.58■□□□□ 0.57
RFX1-205ENST00000589239 OTORQ9NRC9 128 aa18.58■□□□□ 0.57
RFX1-205ENST00000589239 M0R3E3 92 aa18.58■□□□□ 0.56
RFX1-205ENST00000589239 SERF1AO75920 110 aa18.58■□□□□ 0.56
RFX1-205ENST00000589239 TXNDC17Q9BRA2 123 aa18.58■□□□□ 0.56
RFX1-205ENST00000589239 AAMDCQ9H7C9 122 aa18.58■□□□□ 0.56
RFX1-205ENST00000589239 IGLV1-51P01701 117 aa18.57■□□□□ 0.56
RFX1-205ENST00000589239 WFDC9Q8NEX5 89 aa18.57■□□□□ 0.56
RFX1-205ENST00000589239 SLC25A5P05141 298 aaKnown RBP18.56■□□□□ 0.56
RFX1-205ENST00000589239 GNG5P63218 68 aa18.56■□□□□ 0.56
RFX1-205ENST00000589239 Q0VG73 95 aa18.56■□□□□ 0.56
RFX1-205ENST00000589239 DERL1Q9BUN8 251 aa18.56■□□□□ 0.56
RFX1-205ENST00000589239 OR10G8Q8NGN5 311 aa18.55■□□□□ 0.56
RFX1-205ENST00000589239 C20orf173Q96LM9 149 aa18.55■□□□□ 0.56
RFX1-205ENST00000589239 MRPL18Q9H0U6 180 aaKnown RBP18.55■□□□□ 0.56
RFX1-205ENST00000589239 RPH3ALQ9UNE2 315 aa18.55■□□□□ 0.56
RFX1-205ENST00000589239 SCO2A0A1W2PP80 73 aa18.54■□□□□ 0.56
RFX1-205ENST00000589239 K7EQG2 157 aa18.54■□□□□ 0.56
RFX1-205ENST00000589239 ISLRO14498 428 aa18.54■□□□□ 0.56
RFX1-205ENST00000589239 C5orf17Q8NAS9 161 aa18.53■□□□□ 0.56
RFX1-205ENST00000589239 SAMD10Q9BYL1 202 aa18.53■□□□□ 0.56
RFX1-205ENST00000589239 TRAV25A0A0B4J276 109 aa18.53■□□□□ 0.56
RFX1-205ENST00000589239 PGPEP1LA6NFU8 196 aa18.53■□□□□ 0.56
RFX1-205ENST00000589239 BAGE3Q86Y29 109 aa18.53■□□□□ 0.56
RFX1-205ENST00000589239 BAGE2Q86Y30 109 aa18.53■□□□□ 0.56
RFX1-205ENST00000589239 IL36BQ9NZH7 164 aa18.53■□□□□ 0.56
RFX1-205ENST00000589239 CMYA5Q8N3K9 4069 aa18.52■□□□□ 0.56
RFX1-205ENST00000589239 PKD1L1Q8TDX9 2849 aa18.52■□□□□ 0.56
RFX1-205ENST00000589239 TRBV20OR9-2A0A075B6H5 130 aa18.52■□□□□ 0.56
RFX1-205ENST00000589239 C9orf66Q5T8R8 295 aa18.52■□□□□ 0.56
RFX1-205ENST00000589239 SPAG8Q99932 426 aaPredicted RBP18.52■□□□□ 0.56
RFX1-205ENST00000589239 EPDR1Q9UM22 224 aa18.52■□□□□ 0.56
RFX1-205ENST00000589239 IGLL1P15814 213 aa18.52■□□□□ 0.55
RFX1-205ENST00000589239 CTRLP40313 264 aa18.52■□□□□ 0.55
RFX1-205ENST00000589239 SORL1Q92673 2214 aa18.51■□□□□ 0.55
RFX1-205ENST00000589239 ZNF688P0C7X2 276 aa18.51■□□□□ 0.55
RFX1-205ENST00000589239 LCN12Q6JVE5 192 aa18.51■□□□□ 0.55
RFX1-205ENST00000589239 ID1P41134 155 aa18.5■□□□□ 0.55
RFX1-205ENST00000589239 INSL3P51460 131 aa18.5■□□□□ 0.55
RFX1-205ENST00000589239 PSG3Q16557 428 aa18.5■□□□□ 0.55
RFX1-205ENST00000589239 SAMD13Q5VXD3 122 aa18.5■□□□□ 0.55
RFX1-205ENST00000589239 MCRIP2Q9BUT9 160 aaKnown RBP18.5■□□□□ 0.55
RFX1-205ENST00000589239 ZNF256Q9Y2P7 627 aaPredicted RBP18.5■□□□□ 0.55
RFX1-205ENST00000589239 PEX7O00628 323 aa18.5■□□□□ 0.55
RFX1-205ENST00000589239 TCRAP04437 139 aa18.5■□□□□ 0.55
RFX1-205ENST00000589239 Q8N976 141 aa18.5■□□□□ 0.55
RFX1-205ENST00000589239 UQCR10Q9UDW1 63 aa18.5■□□□□ 0.55
RFX1-205ENST00000589239 PRAC2D3DTV9 90 aa18.49■□□□□ 0.55
RFX1-205ENST00000589239 ORAOV1Q8WV07 137 aa18.49■□□□□ 0.55
RFX1-205ENST00000589239 LINC00479Q96M42 142 aa18.49■□□□□ 0.55
RFX1-205ENST00000589239 C20orf202A1L168 122 aa18.49■□□□□ 0.55
RFX1-205ENST00000589239 DIRC3C9JPN6 131 aa18.49■□□□□ 0.55
RFX1-205ENST00000589239 CSN1S1P47710 185 aa18.49■□□□□ 0.55
RFX1-205ENST00000589239 DEFB1P60022 68 aa18.49■□□□□ 0.55
RFX1-205ENST00000589239 PSMG4Q5JS54 123 aa18.49■□□□□ 0.55
RFX1-205ENST00000589239 OR2K2Q8NGT1 345 aa18.49■□□□□ 0.55
RFX1-205ENST00000589239 OCC1Q8TAD7 63 aa18.49■□□□□ 0.55
RFX1-205ENST00000589239 TRAV2A0A0B4J234 112 aa18.48■□□□□ 0.55
RFX1-205ENST00000589239 GPX1P07203 203 aa18.48■□□□□ 0.55
RFX1-205ENST00000589239 SNRPD3P62318 126 aaKnown RBP18.48■□□□□ 0.55
RFX1-205ENST00000589239 GOLT1AQ6ZVE7 132 aa18.48■□□□□ 0.55
RFX1-205ENST00000589239 ZNF738Q8NE65 137 aa18.48■□□□□ 0.55
RFX1-205ENST00000589239 C11orf52Q96A22 123 aa18.48■□□□□ 0.55
RFX1-205ENST00000589239 CLEC5AQ9NY25 188 aa18.48■□□□□ 0.55
RFX1-205ENST00000589239 OR4C46A6NHA9 309 aa18.47■□□□□ 0.55
RFX1-205ENST00000589239 SPATA45Q537H7 98 aa18.47■□□□□ 0.55
RFX1-205ENST00000589239 MRPL53Q96EL3 112 aaKnown RBP18.47■□□□□ 0.55
RFX1-205ENST00000589239 SGK494Q96LW2 274 aa18.47■□□□□ 0.55
RFX1-205ENST00000589239 IGKV2-40A0A087WW87 121 aaPredicted RBP18.46■□□□□ 0.55
RFX1-205ENST00000589239 IGKV2D-40P01614 121 aaPredicted RBP18.46■□□□□ 0.55
RFX1-205ENST00000589239 F2Z2F3 143 aa18.46■□□□□ 0.55
RFX1-205ENST00000589239 KRTDAPP60985 99 aa18.46■□□□□ 0.55
RFX1-205ENST00000589239 STPG4Q8N801 248 aa18.46■□□□□ 0.55
RFX1-205ENST00000589239 GNB1LQ9BYB4 327 aa18.46■□□□□ 0.55
RFX1-205ENST00000589239 LY96Q9Y6Y9 160 aa18.46■□□□□ 0.55
RFX1-205ENST00000589239 TRAV8-1A0A0A6YYK1 113 aa18.45■□□□□ 0.54
RFX1-205ENST00000589239 TRAV34A0A0B4J273 112 aa18.45■□□□□ 0.54
RFX1-205ENST00000589239 RBX1P62877 108 aa18.45■□□□□ 0.54
RFX1-205ENST00000589239 SAPCD1Q5SSQ6 148 aa18.45■□□□□ 0.54
RFX1-205ENST00000589239 SNURFLB1AK76 121 aa18.44■□□□□ 0.54
RFX1-205ENST00000589239 F6UB75 175 aa18.44■□□□□ 0.54
RFX1-205ENST00000589239 IGLC3P0DOY3 106 aa18.44■□□□□ 0.54
RFX1-205ENST00000589239 LAMTOR2Q9Y2Q5 125 aa18.44■□□□□ 0.54
RFX1-205ENST00000589239 OR10J3Q5JRS4 329 aa18.44■□□□□ 0.54
RFX1-205ENST00000589239 DEFB131AP59861 70 aa18.43■□□□□ 0.54
RFX1-205ENST00000589239 PRR31Q5SQ13 230 aa18.43■□□□□ 0.54
RFX1-205ENST00000589239 C9JCJ5 164 aa18.43■□□□□ 0.54
RFX1-205ENST00000589239 K7EN84 100 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms