RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 GATD1Q8NB37 220 aa16.81■□□□□ 0.28
CIRBP-208ENST00000586548 ZNF418Q8TF45 676 aaPredicted RBP16.81■□□□□ 0.28
CIRBP-208ENST00000586548 TMEM18Q96B42 140 aa16.81■□□□□ 0.28
CIRBP-208ENST00000586548 ZNF705DP0CH99 300 aaPredicted RBP16.8■□□□□ 0.28
CIRBP-208ENST00000586548 ZNF705BP0CI00 300 aaPredicted RBP16.8■□□□□ 0.28
CIRBP-208ENST00000586548 ESDP10768 282 aa16.8■□□□□ 0.28
CIRBP-208ENST00000586548 DEFB136Q30KP8 78 aa16.8■□□□□ 0.28
CIRBP-208ENST00000586548 KHDC1LQ5JSQ8 128 aa16.8■□□□□ 0.28
CIRBP-208ENST00000586548 BAGE3Q86Y29 109 aa16.8■□□□□ 0.28
CIRBP-208ENST00000586548 OR8A1Q8NGG7 326 aa16.8■□□□□ 0.28
CIRBP-208ENST00000586548 SELENOKQ9Y6D0 94 aa16.8■□□□□ 0.28
CIRBP-208ENST00000586548 ACANP16112 2415 aa16.8■□□□□ 0.28
CIRBP-208ENST00000586548 ORM1P02763 201 aa16.79■□□□□ 0.28
CIRBP-208ENST00000586548 LYZL1Q6UWQ5 148 aa16.79■□□□□ 0.28
CIRBP-208ENST00000586548 MS4A6AQ9H2W1 248 aa16.79■□□□□ 0.28
CIRBP-208ENST00000586548 C16orf95Q9H693 158 aa16.79■□□□□ 0.28
CIRBP-208ENST00000586548 NOTCH2Q04721 2471 aa16.79■□□□□ 0.28
CIRBP-208ENST00000586548 M0QZ24 198 aa16.79■□□□□ 0.28
CIRBP-208ENST00000586548 IGLC6P0CF74 106 aa16.79■□□□□ 0.28
CIRBP-208ENST00000586548 CTRLP40313 264 aa16.79■□□□□ 0.28
CIRBP-208ENST00000586548 SLURP1P55000 103 aa16.79■□□□□ 0.28
CIRBP-208ENST00000586548 OR11H1Q8NG94 326 aa16.79■□□□□ 0.28
CIRBP-208ENST00000586548 DPF1Q92782 380 aa16.79■□□□□ 0.28
CIRBP-208ENST00000586548 TPPP3Q9BW30 176 aa16.79■□□□□ 0.28
CIRBP-208ENST00000586548 NUPR1O60356 82 aa16.78■□□□□ 0.28
CIRBP-208ENST00000586548 SERF1AO75920 110 aa16.78■□□□□ 0.28
CIRBP-208ENST00000586548 LINC00310P59036 64 aa16.78■□□□□ 0.28
CIRBP-208ENST00000586548 FER1L6-AS1Q8NA97 138 aa16.78■□□□□ 0.28
CIRBP-208ENST00000586548 KLHL30-AS1Q8NEE0 82 aa16.78■□□□□ 0.28
CIRBP-208ENST00000586548 OR1N2Q8NGR9 330 aa16.78■□□□□ 0.28
CIRBP-208ENST00000586548 TRBV7-9A0A0J9YWB2 115 aa16.77■□□□□ 0.28
CIRBP-208ENST00000586548 HILS1P60008 231 aa16.77■□□□□ 0.28
CIRBP-208ENST00000586548 ZNF575Q86XF7 245 aa16.77■□□□□ 0.28
CIRBP-208ENST00000586548 ALKBH7Q9BT30 221 aaPredicted RBP16.77■□□□□ 0.28
CIRBP-208ENST00000586548 MYO9AB2RTY4 2548 aa16.77■□□□□ 0.27
CIRBP-208ENST00000586548 F2Z2F3 143 aa16.76■□□□□ 0.27
CIRBP-208ENST00000586548 WFDC3Q8IUB2 231 aa16.76■□□□□ 0.27
CIRBP-208ENST00000586548 FAM19A4Q96LR4 140 aa16.76■□□□□ 0.27
CIRBP-208ENST00000586548 SMR3AQ99954 134 aa16.76■□□□□ 0.27
CIRBP-208ENST00000586548 K7EQG2 157 aa16.76■□□□□ 0.27
CIRBP-208ENST00000586548 DEFB1P60022 68 aa16.76■□□□□ 0.27
CIRBP-208ENST00000586548 PYY3Q5JQD4 70 aa16.76■□□□□ 0.27
CIRBP-208ENST00000586548 ZFAND2AQ8N6M9 145 aa16.76■□□□□ 0.27
CIRBP-208ENST00000586548 C18orf32Q8TCD1 76 aa16.76■□□□□ 0.27
CIRBP-208ENST00000586548 PEMTQ9UBM1 199 aa16.76■□□□□ 0.27
CIRBP-208ENST00000586548 F6UB75 175 aa16.75■□□□□ 0.27
CIRBP-208ENST00000586548 LY6G6DO95868 133 aa16.75■□□□□ 0.27
CIRBP-208ENST00000586548 LOC102724200A0A096LPH7 203 aaPredicted RBP16.74■□□□□ 0.27
CIRBP-208ENST00000586548 SNRPD3P62318 126 aaKnown RBP16.74■□□□□ 0.27
CIRBP-208ENST00000586548 PRR9Q5T870 116 aa16.74■□□□□ 0.27
CIRBP-208ENST00000586548 ADAMTSL5Q6ZMM2 481 aa16.74■□□□□ 0.27
CIRBP-208ENST00000586548 ZNF493Q6ZR52 646 aa16.74■□□□□ 0.27
CIRBP-208ENST00000586548 C11orf21Q9P2W6 132 aa16.74■□□□□ 0.27
CIRBP-208ENST00000586548 IGKV3D-20A0A0C4DH25 116 aa16.73■□□□□ 0.27
CIRBP-208ENST00000586548 PAFAH1B2P68402 229 aa16.73■□□□□ 0.27
CIRBP-208ENST00000586548 LINC01006Q8NI28 216 aa16.73■□□□□ 0.27
CIRBP-208ENST00000586548 APRG1Q8IVJ8 170 aa16.73■□□□□ 0.27
CIRBP-208ENST00000586548 OR9G4Q8NGQ1 327 aa16.73■□□□□ 0.27
CIRBP-208ENST00000586548 CNFNQ9BYD5 112 aa16.73■□□□□ 0.27
CIRBP-208ENST00000586548 TFPI2P48307 235 aa16.72■□□□□ 0.27
CIRBP-208ENST00000586548 KCNS1Q96KK3 526 aa16.72■□□□□ 0.27
CIRBP-208ENST00000586548 JMJD8Q96S16 334 aa16.72■□□□□ 0.27
CIRBP-208ENST00000586548 ZNF688P0C7X2 276 aa16.71■□□□□ 0.27
CIRBP-208ENST00000586548 PRR31Q5SQ13 230 aa16.71■□□□□ 0.27
CIRBP-208ENST00000586548 RCHY1Q96PM5 261 aa16.71■□□□□ 0.27
CIRBP-208ENST00000586548 DUX3Q96PT4 197 aa16.71■□□□□ 0.27
CIRBP-208ENST00000586548 SETXQ7Z333 2677 aaKnown RBP16.71■□□□□ 0.27
CIRBP-208ENST00000586548 TRAV21A0A0B4J279 112 aa16.7■□□□□ 0.26
CIRBP-208ENST00000586548 IQCJQ1A5X6 159 aa16.7■□□□□ 0.26
CIRBP-208ENST00000586548 PSMG4Q5JS54 123 aa16.7■□□□□ 0.26
CIRBP-208ENST00000586548 DLX4Q92988 240 aaPredicted RBP16.7■□□□□ 0.26
CIRBP-208ENST00000586548 NIT2Q9NQR4 276 aa16.7■□□□□ 0.26
CIRBP-208ENST00000586548 GPX1P07203 203 aa16.7■□□□□ 0.26
CIRBP-208ENST00000586548 CD28P10747 220 aa16.7■□□□□ 0.26
CIRBP-208ENST00000586548 NDUFA7O95182 113 aa16.69■□□□□ 0.26
CIRBP-208ENST00000586548 DNLZQ5SXM8 178 aa16.69■□□□□ 0.26
CIRBP-208ENST00000586548 CYSRT1A8MQ03 144 aa16.68■□□□□ 0.26
CIRBP-208ENST00000586548 JOSD1Q15040 202 aaPredicted RBP16.68■□□□□ 0.26
CIRBP-208ENST00000586548 ODF3Q96PU9 254 aa16.68■□□□□ 0.26
CIRBP-208ENST00000586548 TRAV2A0A0B4J234 112 aa16.67■□□□□ 0.26
CIRBP-208ENST00000586548 J3KRW8 73 aa16.67■□□□□ 0.26
CIRBP-208ENST00000586548 CSN3P07498 182 aa16.67■□□□□ 0.26
CIRBP-208ENST00000586548 FHL3Q13643 280 aa16.67■□□□□ 0.26
CIRBP-208ENST00000586548 TWIST1Q15672 202 aa16.67■□□□□ 0.26
CIRBP-208ENST00000586548 RAX2Q96IS3 184 aa16.67■□□□□ 0.26
CIRBP-208ENST00000586548 SAMD10Q9BYL1 202 aa16.67■□□□□ 0.26
CIRBP-208ENST00000586548 TSSC4Q9Y5U2 329 aaPredicted RBP16.67■□□□□ 0.26
CIRBP-208ENST00000586548 MUC21A0A0G2JKD1 596 aa16.67■□□□□ 0.26
CIRBP-208ENST00000586548 A0A0J9YX75 114 aa16.67■□□□□ 0.26
CIRBP-208ENST00000586548 MUC21A0A140T8X8 626 aa16.67■□□□□ 0.26
CIRBP-208ENST00000586548 NTF3P20783 257 aa16.67■□□□□ 0.26
CIRBP-208ENST00000586548 MUC21Q5SSG8 566 aa16.67■□□□□ 0.26
CIRBP-208ENST00000586548 Q6ZQT7 251 aa16.67■□□□□ 0.26
CIRBP-208ENST00000586548 KLLNB2CW77 178 aa16.66■□□□□ 0.26
CIRBP-208ENST00000586548 FAM104BQ5XKR9 115 aa16.66■□□□□ 0.26
CIRBP-208ENST00000586548 HIST2H2BDQ6DRA6 164 aa16.66■□□□□ 0.26
CIRBP-208ENST00000586548 C11orf44Q8N8P7 122 aa16.66■□□□□ 0.26
CIRBP-208ENST00000586548 HIVEP2P31629 2446 aa16.66■□□□□ 0.26
CIRBP-208ENST00000586548 RNASE4P34096 147 aaKnown RBP16.65■□□□□ 0.26
CIRBP-208ENST00000586548 SSTP61278 116 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms