RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 GDF5OSQ5U4N7 250 aa10.42□□□□□ -0.74
UBBP4-202ENST00000584755 ZFAND2AQ8N6M9 145 aa10.42□□□□□ -0.74
UBBP4-202ENST00000584755 BTF3L4Q96K17 158 aa10.42□□□□□ -0.74
UBBP4-202ENST00000584755 A0A1W2PPQ1 181 aa10.41□□□□□ -0.74
UBBP4-202ENST00000584755 FAM231BA6NCW3 169 aa10.41□□□□□ -0.74
UBBP4-202ENST00000584755 CA1P00915 261 aaPredicted RBP10.41□□□□□ -0.74
UBBP4-202ENST00000584755 TYMSP04818 313 aa10.41□□□□□ -0.74
UBBP4-202ENST00000584755 FAM210BQ96KR6 192 aa10.41□□□□□ -0.74
UBBP4-202ENST00000584755 ZNF747Q9BV97 191 aa10.41□□□□□ -0.74
UBBP4-202ENST00000584755 GFRA4Q9GZZ7 299 aa10.41□□□□□ -0.74
UBBP4-202ENST00000584755 MAP6D1Q9H9H5 199 aa10.41□□□□□ -0.74
UBBP4-202ENST00000584755 FABP5P3A8MUU1 101 aa10.4□□□□□ -0.74
UBBP4-202ENST00000584755 A8MWL6 223 aa10.4□□□□□ -0.74
UBBP4-202ENST00000584755 DUSP14O95147 198 aaKnown RBP10.4□□□□□ -0.74
UBBP4-202ENST00000584755 DEFB131AP59861 70 aa10.4□□□□□ -0.74
UBBP4-202ENST00000584755 EBLN2Q6P2I7 272 aa10.4□□□□□ -0.74
UBBP4-202ENST00000584755 KLLNB2CW77 178 aa10.39□□□□□ -0.75
UBBP4-202ENST00000584755 FOXA3P55318 350 aaPredicted RBP10.39□□□□□ -0.75
UBBP4-202ENST00000584755 PRR9Q5T870 116 aa10.39□□□□□ -0.75
UBBP4-202ENST00000584755 OR2D3Q8NGH3 330 aa10.39□□□□□ -0.75
UBBP4-202ENST00000584755 NEU1Q99519 415 aa10.39□□□□□ -0.75
UBBP4-202ENST00000584755 HLA-DRB4P13762 266 aa10.38□□□□□ -0.75
UBBP4-202ENST00000584755 INSL3P51460 131 aa10.38□□□□□ -0.75
UBBP4-202ENST00000584755 ODF3L2Q3SX64 289 aa10.38□□□□□ -0.75
UBBP4-202ENST00000584755 LINC01559Q495D7 138 aa10.38□□□□□ -0.75
UBBP4-202ENST00000584755 AMTNQ6UX39 209 aa10.38□□□□□ -0.75
UBBP4-202ENST00000584755 ZNF575Q86XF7 245 aa10.38□□□□□ -0.75
UBBP4-202ENST00000584755 GTSF1Q8WW33 167 aa10.38□□□□□ -0.75
UBBP4-202ENST00000584755 FAM110AQ9BQ89 295 aa10.38□□□□□ -0.75
UBBP4-202ENST00000584755 NAT8BQ9UHF3 227 aa10.38□□□□□ -0.75
UBBP4-202ENST00000584755 HLA-DRB4X5D2U9 266 aa10.38□□□□□ -0.75
UBBP4-202ENST00000584755 FBN1P35555 2871 aaKnown RBP10.37□□□□□ -0.75
UBBP4-202ENST00000584755 CD33P20138 364 aa10.37□□□□□ -0.75
UBBP4-202ENST00000584755 CMC4P56277 68 aaPredicted RBP10.37□□□□□ -0.75
UBBP4-202ENST00000584755 TCL1AP56279 114 aa10.37□□□□□ -0.75
UBBP4-202ENST00000584755 RPL19P84098 196 aaKnown RBP10.37□□□□□ -0.75
UBBP4-202ENST00000584755 BEAN1Q3B7T3 259 aa10.37□□□□□ -0.75
UBBP4-202ENST00000584755 Q6AWC8 147 aa10.37□□□□□ -0.75
UBBP4-202ENST00000584755 WFDC9Q8NEX5 89 aa10.37□□□□□ -0.75
UBBP4-202ENST00000584755 NUP35Q8NFH5 326 aa10.37□□□□□ -0.75
UBBP4-202ENST00000584755 SRD5A3Q9H8P0 318 aa10.37□□□□□ -0.75
UBBP4-202ENST00000584755 SORL1Q92673 2214 aa10.37□□□□□ -0.75
UBBP4-202ENST00000584755 VWFP04275 2813 aa10.37□□□□□ -0.75
UBBP4-202ENST00000584755 TMEM189A5PLL7 270 aa10.36□□□□□ -0.75
UBBP4-202ENST00000584755 HIGD1CA8MV81 97 aa10.36□□□□□ -0.75
UBBP4-202ENST00000584755 H3BMM0 161 aa10.36□□□□□ -0.75
UBBP4-202ENST00000584755 LEPP41159 167 aa10.36□□□□□ -0.75
UBBP4-202ENST00000584755 RPS20P60866 119 aaKnown RBP10.36□□□□□ -0.75
UBBP4-202ENST00000584755 CLUHP3Q96NS8 147 aa10.36□□□□□ -0.75
UBBP4-202ENST00000584755 C11orf21Q9P2W6 132 aa10.36□□□□□ -0.75
UBBP4-202ENST00000584755 TRAV21A0A0B4J279 112 aa10.36□□□□□ -0.75
UBBP4-202ENST00000584755 XKRY2A2RUG3 117 aa10.36□□□□□ -0.75
UBBP4-202ENST00000584755 KNCNA6PVL3 124 aa10.36□□□□□ -0.75
UBBP4-202ENST00000584755 GPX1P07203 203 aa10.36□□□□□ -0.75
UBBP4-202ENST00000584755 RPS10P46783 165 aaKnown RBP10.36□□□□□ -0.75
UBBP4-202ENST00000584755 C9orf66Q5T8R8 295 aa10.36□□□□□ -0.75
UBBP4-202ENST00000584755 SPATA3Q8NHX4 192 aa10.36□□□□□ -0.75
UBBP4-202ENST00000584755 IGKV3D-20A0A0C4DH25 116 aa10.35□□□□□ -0.75
UBBP4-202ENST00000584755 GZMBP10144 247 aa10.35□□□□□ -0.75
UBBP4-202ENST00000584755 TSPOP30536 169 aa10.35□□□□□ -0.75
UBBP4-202ENST00000584755 KIR3DS1Q14943 382 aa10.35□□□□□ -0.75
UBBP4-202ENST00000584755 ACTL10Q5JWF8 245 aa10.35□□□□□ -0.75
UBBP4-202ENST00000584755 TMEM158Q8WZ71 300 aa10.35□□□□□ -0.75
UBBP4-202ENST00000584755 OR11H12B2RN74 326 aa10.34□□□□□ -0.75
UBBP4-202ENST00000584755 PHOX2AO14813 284 aa10.34□□□□□ -0.75
UBBP4-202ENST00000584755 ORM1P02763 201 aa10.34□□□□□ -0.75
UBBP4-202ENST00000584755 CDKN1BP46527 198 aa10.34□□□□□ -0.75
UBBP4-202ENST00000584755 ZNF124Q15973 351 aa10.34□□□□□ -0.75
UBBP4-202ENST00000584755 RASL11AQ6T310 242 aa10.34□□□□□ -0.75
UBBP4-202ENST00000584755 SHISA2Q6UWI4 295 aa10.34□□□□□ -0.75
UBBP4-202ENST00000584755 Q6ZQT7 251 aa10.34□□□□□ -0.75
UBBP4-202ENST00000584755 ATP5L2Q7Z4Y8 100 aa10.34□□□□□ -0.75
UBBP4-202ENST00000584755 MCRIP2Q9BUT9 160 aaKnown RBP10.34□□□□□ -0.75
UBBP4-202ENST00000584755 C19orf73Q9NVV2 129 aa10.34□□□□□ -0.75
UBBP4-202ENST00000584755 A0A1B0GXF2 115 aa10.33□□□□□ -0.76
UBBP4-202ENST00000584755 WIPF1O43516 503 aa10.33□□□□□ -0.76
UBBP4-202ENST00000584755 IGLC6P0CF74 106 aa10.33□□□□□ -0.76
UBBP4-202ENST00000584755 RNASE4P34096 147 aaKnown RBP10.33□□□□□ -0.76
UBBP4-202ENST00000584755 COX19Q49B96 90 aa10.33□□□□□ -0.76
UBBP4-202ENST00000584755 LURAP1LQ8IV03 231 aa10.33□□□□□ -0.76
UBBP4-202ENST00000584755 TMA7Q9Y2S6 64 aaKnown RBP10.33□□□□□ -0.76
UBBP4-202ENST00000584755 AGRNO00468 2067 aa10.33□□□□□ -0.76
UBBP4-202ENST00000584755 TMSB15BA0A087X1C1 80 aa10.32□□□□□ -0.76
UBBP4-202ENST00000584755 C7orf71A4D174 169 aa10.32□□□□□ -0.76
UBBP4-202ENST00000584755 RBMY1BA6NDE4 496 aaKnown RBP10.32□□□□□ -0.76
UBBP4-202ENST00000584755 RBMY1EA6NEQ0 496 aaKnown RBP10.32□□□□□ -0.76
UBBP4-202ENST00000584755 ZNF324O75467 553 aaPredicted RBP10.32□□□□□ -0.76
UBBP4-202ENST00000584755 IGKV3-20P01619 116 aa10.32□□□□□ -0.76
UBBP4-202ENST00000584755 RBMY1DP0C7P1 496 aaKnown RBP10.32□□□□□ -0.76
UBBP4-202ENST00000584755 FRMD6-AS1P0C7T7 363 aa10.32□□□□□ -0.76
UBBP4-202ENST00000584755 CTRLP40313 264 aa10.32□□□□□ -0.76
UBBP4-202ENST00000584755 GFI1BQ5VTD9 330 aa10.32□□□□□ -0.76
UBBP4-202ENST00000584755 C3orf56Q8N813 242 aa10.32□□□□□ -0.76
UBBP4-202ENST00000584755 PGLYRP4Q96LB8 373 aa10.32□□□□□ -0.76
UBBP4-202ENST00000584755 GNB1LQ9BYB4 327 aa10.32□□□□□ -0.76
UBBP4-202ENST00000584755 TRRAPQ9Y4A5 3859 aa10.31□□□□□ -0.76
UBBP4-202ENST00000584755 C1orf196B1AJZ1 125 aa10.31□□□□□ -0.76
UBBP4-202ENST00000584755 J3KRW8 73 aa10.31□□□□□ -0.76
UBBP4-202ENST00000584755 TRGC2P03986 189 aa10.31□□□□□ -0.76
UBBP4-202ENST00000584755 CD7P09564 240 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms