RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 GTSCR1Q86UQ5 136 aa10.86□□□□□ -0.67
SENP3-208ENST00000583277 OR4B1Q8NGF8 309 aa10.86□□□□□ -0.67
SENP3-208ENST00000583277 CLUHP3Q96NS8 147 aa10.86□□□□□ -0.67
SENP3-208ENST00000583277 SMCO4Q9NRQ5 59 aa10.86□□□□□ -0.67
SENP3-208ENST00000583277 C19orf71A6NCJ1 209 aa10.86□□□□□ -0.67
SENP3-208ENST00000583277 CXorf65A6NEN9 183 aa10.86□□□□□ -0.67
SENP3-208ENST00000583277 SCO1O75880 301 aa10.86□□□□□ -0.67
SENP3-208ENST00000583277 APRG1Q8IVJ8 170 aa10.86□□□□□ -0.67
SENP3-208ENST00000583277 ZFAND2AQ8N6M9 145 aa10.86□□□□□ -0.67
SENP3-208ENST00000583277 PKD1L1Q8TDX9 2849 aa10.85□□□□□ -0.67
SENP3-208ENST00000583277 ZNF705GA8MUZ8 300 aaPredicted RBP10.85□□□□□ -0.67
SENP3-208ENST00000583277 GATCO43716 136 aaKnown RBP10.85□□□□□ -0.67
SENP3-208ENST00000583277 PFN1P07737 140 aaKnown RBP10.85□□□□□ -0.67
SENP3-208ENST00000583277 CD7P09564 240 aa10.85□□□□□ -0.67
SENP3-208ENST00000583277 CT83Q5H943 113 aa10.85□□□□□ -0.67
SENP3-208ENST00000583277 NUDT10Q8NFP7 164 aa10.85□□□□□ -0.67
SENP3-208ENST00000583277 NUDT11Q96G61 164 aa10.85□□□□□ -0.67
SENP3-208ENST00000583277 MDFIQ99750 246 aa10.85□□□□□ -0.67
SENP3-208ENST00000583277 RPP21Q9H633 154 aaKnown RBP10.85□□□□□ -0.67
SENP3-208ENST00000583277 FABP5P3A8MUU1 101 aa10.84□□□□□ -0.67
SENP3-208ENST00000583277 KLLNB2CW77 178 aa10.84□□□□□ -0.67
SENP3-208ENST00000583277 SH2D1AO60880 128 aa10.84□□□□□ -0.67
SENP3-208ENST00000583277 GPX1P07203 203 aa10.84□□□□□ -0.67
SENP3-208ENST00000583277 LINC00322Q6ZN03 302 aaPredicted RBP10.84□□□□□ -0.67
SENP3-208ENST00000583277 STHQ8IWL8 128 aa10.84□□□□□ -0.67
SENP3-208ENST00000583277 IMMP2LQ96T52 175 aa10.84□□□□□ -0.67
SENP3-208ENST00000583277 TUBA4BQ9H853 241 aa10.84□□□□□ -0.67
SENP3-208ENST00000583277 V9GYV3 84 aa10.84□□□□□ -0.67
SENP3-208ENST00000583277 IGKV3-20P01619 116 aa10.83□□□□□ -0.68
SENP3-208ENST00000583277 CDKN1BP46527 198 aa10.83□□□□□ -0.68
SENP3-208ENST00000583277 CRIP1P50238 77 aa10.83□□□□□ -0.68
SENP3-208ENST00000583277 ZNF124Q15973 351 aa10.83□□□□□ -0.68
SENP3-208ENST00000583277 TMEM88Q6PEY1 159 aa10.83□□□□□ -0.68
SENP3-208ENST00000583277 AMTNQ6UX39 209 aa10.83□□□□□ -0.68
SENP3-208ENST00000583277 CBLN2Q8IUK8 224 aa10.83□□□□□ -0.68
SENP3-208ENST00000583277 C19orf73Q9NVV2 129 aa10.83□□□□□ -0.68
SENP3-208ENST00000583277 ZMAT5Q9UDW3 170 aaKnown RBP10.83□□□□□ -0.68
SENP3-208ENST00000583277 TRAV21A0A0B4J279 112 aa10.82□□□□□ -0.68
SENP3-208ENST00000583277 S100PP25815 95 aa10.82□□□□□ -0.68
SENP3-208ENST00000583277 ZNF80P51504 273 aaPredicted RBP10.82□□□□□ -0.68
SENP3-208ENST00000583277 BTN1A1Q13410 526 aa10.82□□□□□ -0.68
SENP3-208ENST00000583277 Q6AWC8 147 aa10.82□□□□□ -0.68
SENP3-208ENST00000583277 CMYA5Q8N3K9 4069 aa10.82□□□□□ -0.68
SENP3-208ENST00000583277 A8MWL6 223 aa10.82□□□□□ -0.68
SENP3-208ENST00000583277 PRR9Q5T870 116 aa10.82□□□□□ -0.68
SENP3-208ENST00000583277 KCNIP4Q6PIL6 250 aa10.82□□□□□ -0.68
SENP3-208ENST00000583277 TRPT1Q86TN4 253 aaKnown RBP10.82□□□□□ -0.68
SENP3-208ENST00000583277 OR2D3Q8NGH3 330 aa10.82□□□□□ -0.68
SENP3-208ENST00000583277 XKRY2A2RUG3 117 aa10.81□□□□□ -0.68
SENP3-208ENST00000583277 C7orf71A4D174 169 aa10.81□□□□□ -0.68
SENP3-208ENST00000583277 J3KRW8 73 aa10.81□□□□□ -0.68
SENP3-208ENST00000583277 AMBPP02760 352 aa10.81□□□□□ -0.68
SENP3-208ENST00000583277 RNASE4P34096 147 aaKnown RBP10.81□□□□□ -0.68
SENP3-208ENST00000583277 RPS20P60866 119 aaKnown RBP10.81□□□□□ -0.68
SENP3-208ENST00000583277 SPINK13Q1W4C9 94 aa10.81□□□□□ -0.68
SENP3-208ENST00000583277 IL36BQ9NZH7 164 aa10.81□□□□□ -0.68
SENP3-208ENST00000583277 TMEM189A5PLL7 270 aa10.8□□□□□ -0.68
SENP3-208ENST00000583277 RBMY1BA6NDE4 496 aaKnown RBP10.8□□□□□ -0.68
SENP3-208ENST00000583277 RBMY1EA6NEQ0 496 aaKnown RBP10.8□□□□□ -0.68
SENP3-208ENST00000583277 M0R2Z0 102 aa10.8□□□□□ -0.68
SENP3-208ENST00000583277 RBMY1DP0C7P1 496 aaKnown RBP10.8□□□□□ -0.68
SENP3-208ENST00000583277 NUTF2P61970 127 aaKnown RBP10.8□□□□□ -0.68
SENP3-208ENST00000583277 LINC01559Q495D7 138 aa10.8□□□□□ -0.68
SENP3-208ENST00000583277 TSKUQ8WUA8 353 aa10.8□□□□□ -0.68
SENP3-208ENST00000583277 FAM231BA6NCW3 169 aa10.79□□□□□ -0.68
SENP3-208ENST00000583277 GFI1BQ5VTD9 330 aa10.79□□□□□ -0.68
SENP3-208ENST00000583277 GFRA4Q9GZZ7 299 aa10.79□□□□□ -0.68
SENP3-208ENST00000583277 WFDC10AQ9H1F0 79 aa10.79□□□□□ -0.68
SENP3-208ENST00000583277 URGCP-MRPS24S4R325 110 aa10.79□□□□□ -0.68
SENP3-208ENST00000583277 TRAV9-1A0A075B6T8 112 aa10.78□□□□□ -0.68
SENP3-208ENST00000583277 SMIM27A0A1W2PRY6 76 aa10.78□□□□□ -0.68
SENP3-208ENST00000583277 CA1P00915 261 aaPredicted RBP10.78□□□□□ -0.68
SENP3-208ENST00000583277 ORM1P02763 201 aa10.78□□□□□ -0.68
SENP3-208ENST00000583277 EGFEM1PQ0D2K5 195 aa10.78□□□□□ -0.68
SENP3-208ENST00000583277 OXLD1Q5BKU9 147 aa10.78□□□□□ -0.68
SENP3-208ENST00000583277 BTF3L4Q96K17 158 aa10.78□□□□□ -0.68
SENP3-208ENST00000583277 RPL19P84098 196 aaKnown RBP10.77□□□□□ -0.68
SENP3-208ENST00000583277 KIR3DS1Q14943 382 aa10.77□□□□□ -0.68
SENP3-208ENST00000583277 MORN3Q6PF18 240 aaPredicted RBP10.77□□□□□ -0.68
SENP3-208ENST00000583277 TRAV12-2A0A075B6T6 113 aa10.77□□□□□ -0.69
SENP3-208ENST00000583277 INSP01308 110 aa10.77□□□□□ -0.69
SENP3-208ENST00000583277 CXCL1P09341 107 aa10.77□□□□□ -0.69
SENP3-208ENST00000583277 ELOBQ15370 118 aa10.77□□□□□ -0.69
SENP3-208ENST00000583277 DEFB125Q8N687 156 aa10.77□□□□□ -0.69
SENP3-208ENST00000583277 YPEL4Q96NS1 127 aa10.77□□□□□ -0.69
SENP3-208ENST00000583277 NEU1Q99519 415 aa10.77□□□□□ -0.69
SENP3-208ENST00000583277 C20orf144Q9BQM9 153 aa10.77□□□□□ -0.69
SENP3-208ENST00000583277 NAT8BQ9UHF3 227 aa10.77□□□□□ -0.69
SENP3-208ENST00000583277 TRAV12-3A0A0B4J271 114 aa10.76□□□□□ -0.69
SENP3-208ENST00000583277 A0A1W2PPQ1 181 aa10.76□□□□□ -0.69
SENP3-208ENST00000583277 HIGD1CA8MV81 97 aa10.76□□□□□ -0.69
SENP3-208ENST00000583277 ZNF324O75467 553 aaPredicted RBP10.76□□□□□ -0.69
SENP3-208ENST00000583277 FXYD7P58549 80 aa10.76□□□□□ -0.69
SENP3-208ENST00000583277 SRD5A3Q9H8P0 318 aa10.76□□□□□ -0.69
SENP3-208ENST00000583277 NAGKQ9UJ70 344 aa10.76□□□□□ -0.69
SENP3-208ENST00000583277 TRBV24-1A0A075B6N3 115 aa10.75□□□□□ -0.69
SENP3-208ENST00000583277 TMSB15BA0A087X1C1 80 aa10.75□□□□□ -0.69
SENP3-208ENST00000583277 IGKV3D-20A0A0C4DH25 116 aa10.75□□□□□ -0.69
SENP3-208ENST00000583277 CRXO43186 299 aaPredicted RBP10.75□□□□□ -0.69
SENP3-208ENST00000583277 TCL1AP56279 114 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms