RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 TREM1Q9NP99 234 aa9.87□□□□□ -0.83
NDE1-209ENST00000574109 U3KQK5 164 aa9.87□□□□□ -0.83
NDE1-209ENST00000574109 TRAV12-2A0A075B6T6 113 aa9.86□□□□□ -0.83
NDE1-209ENST00000574109 TMEM189A5PLL7 270 aa9.86□□□□□ -0.83
NDE1-209ENST00000574109 TAS2R60P59551 318 aa9.86□□□□□ -0.83
NDE1-209ENST00000574109 SMUG1Q53HV7 270 aa9.86□□□□□ -0.83
NDE1-209ENST00000574109 TOR2AQ5JU69 321 aa9.86□□□□□ -0.83
NDE1-209ENST00000574109 Q6AWC8 147 aa9.86□□□□□ -0.83
NDE1-209ENST00000574109 PRNTQ86SH4 94 aa9.86□□□□□ -0.83
NDE1-209ENST00000574109 EIF5A2Q9GZV4 153 aaKnown RBP9.86□□□□□ -0.83
NDE1-209ENST00000574109 LTAP01374 205 aa9.85□□□□□ -0.83
NDE1-209ENST00000574109 CLLU1Q5K131 121 aa9.85□□□□□ -0.83
NDE1-209ENST00000574109 COX8CQ7Z4L0 72 aa9.85□□□□□ -0.83
NDE1-209ENST00000574109 LINC00467Q9BRT7 94 aa9.85□□□□□ -0.83
NDE1-209ENST00000574109 RETNQ9HD89 108 aa9.85□□□□□ -0.83
NDE1-209ENST00000574109 TRAV21A0A0B4J279 112 aa9.84□□□□□ -0.83
NDE1-209ENST00000574109 TEX48A0A1B0GUV7 120 aa9.84□□□□□ -0.83
NDE1-209ENST00000574109 RGS13O14921 159 aa9.84□□□□□ -0.83
NDE1-209ENST00000574109 PRB4P10163 310 aaPredicted RBP9.84□□□□□ -0.83
NDE1-209ENST00000574109 BTN1A1Q13410 526 aa9.84□□□□□ -0.83
NDE1-209ENST00000574109 RRN3P1Q2M238 152 aa9.84□□□□□ -0.83
NDE1-209ENST00000574109 ZNF493Q6ZR52 646 aa9.84□□□□□ -0.83
NDE1-209ENST00000574109 C1orf158Q8N1D5 194 aa9.84□□□□□ -0.83
NDE1-209ENST00000574109 IGHV3OR16-12A0A075B7B8 117 aa9.83□□□□□ -0.84
NDE1-209ENST00000574109 TRAV12-3A0A0B4J271 114 aa9.83□□□□□ -0.84
NDE1-209ENST00000574109 TRAV34A0A0B4J273 112 aa9.83□□□□□ -0.84
NDE1-209ENST00000574109 J3KRW8 73 aa9.83□□□□□ -0.84
NDE1-209ENST00000574109 RNASE4P34096 147 aaKnown RBP9.83□□□□□ -0.84
NDE1-209ENST00000574109 RPL35P42766 123 aaKnown RBP9.83□□□□□ -0.84
NDE1-209ENST00000574109 IFITM2Q01629 132 aa9.83□□□□□ -0.84
NDE1-209ENST00000574109 TMEM183AQ8IXX5 376 aa9.83□□□□□ -0.84
NDE1-209ENST00000574109 TMEM263Q8WUH6 116 aaKnown RBP9.83□□□□□ -0.84
NDE1-209ENST00000574109 C16orf74Q96GX8 76 aa9.83□□□□□ -0.84
NDE1-209ENST00000574109 LINC01587Q99440 93 aa9.83□□□□□ -0.84
NDE1-209ENST00000574109 MED9Q9NWA0 146 aa9.83□□□□□ -0.84
NDE1-209ENST00000574109 X6R8D5 127 aa9.83□□□□□ -0.84
NDE1-209ENST00000574109 PFN1P07737 140 aaKnown RBP9.82□□□□□ -0.84
NDE1-209ENST00000574109 PEA15Q15121 130 aa9.82□□□□□ -0.84
NDE1-209ENST00000574109 PRR9Q5T870 116 aa9.82□□□□□ -0.84
NDE1-209ENST00000574109 Q8NAQ8 132 aa9.82□□□□□ -0.84
NDE1-209ENST00000574109 LINC00479Q96M42 142 aa9.82□□□□□ -0.84
NDE1-209ENST00000574109 BIN3Q9NQY0 253 aa9.82□□□□□ -0.84
NDE1-209ENST00000574109 DNAH9Q9NYC9 4486 aa9.81□□□□□ -0.84
NDE1-209ENST00000574109 RAB19A4D1S5 217 aa9.81□□□□□ -0.84
NDE1-209ENST00000574109 C9JCJ5 164 aa9.81□□□□□ -0.84
NDE1-209ENST00000574109 ZNF324O75467 553 aaPredicted RBP9.81□□□□□ -0.84
NDE1-209ENST00000574109 GCGP01275 180 aa9.81□□□□□ -0.84
NDE1-209ENST00000574109 RBMY1A1P0DJD3 496 aaKnown RBP9.81□□□□□ -0.84
NDE1-209ENST00000574109 RBMY1CP0DJD4 496 aa9.81□□□□□ -0.84
NDE1-209ENST00000574109 GNG4P50150 75 aa9.81□□□□□ -0.84
NDE1-209ENST00000574109 RBMY1FQ15415 496 aaKnown RBP9.81□□□□□ -0.84
NDE1-209ENST00000574109 TDRG1Q3Y452 100 aa9.81□□□□□ -0.84
NDE1-209ENST00000574109 ANXA2RQ3ZCQ2 193 aa9.81□□□□□ -0.84
NDE1-209ENST00000574109 FAM159AQ6UWV7 190 aa9.81□□□□□ -0.84
NDE1-209ENST00000574109 BAGE2Q86Y30 109 aa9.81□□□□□ -0.84
NDE1-209ENST00000574109 EIF4E3Q8N5X7 224 aaKnown RBP9.81□□□□□ -0.84
NDE1-209ENST00000574109 TVP23CQ96ET8 276 aa9.81□□□□□ -0.84
NDE1-209ENST00000574109 KCNS1Q96KK3 526 aa9.81□□□□□ -0.84
NDE1-209ENST00000574109 SGK494Q96LW2 274 aa9.81□□□□□ -0.84
NDE1-209ENST00000574109 TRGV11A0A075B6L2 103 aa9.8□□□□□ -0.84
NDE1-209ENST00000574109 IGHV1OR15-1A0A075B7D0 117 aa9.8□□□□□ -0.84
NDE1-209ENST00000574109 IGHV4-28A0A0C4DH34 117 aa9.8□□□□□ -0.84
NDE1-209ENST00000574109 KIR3DS1Q14943 382 aa9.8□□□□□ -0.84
NDE1-209ENST00000574109 CENPWQ5EE01 88 aa9.8□□□□□ -0.84
NDE1-209ENST00000574109 IBA57Q5T440 356 aaKnown RBP9.8□□□□□ -0.84
NDE1-209ENST00000574109 FAM162BQ5T6X4 162 aa9.8□□□□□ -0.84
NDE1-209ENST00000574109 PCNPQ8WW12 178 aaKnown RBP9.8□□□□□ -0.84
NDE1-209ENST00000574109 C8orf49Q96NF6 230 aa9.8□□□□□ -0.84
NDE1-209ENST00000574109 PARLQ9H300 379 aa9.8□□□□□ -0.84
NDE1-209ENST00000574109 FABP5P3A8MUU1 101 aa9.79□□□□□ -0.84
NDE1-209ENST00000574109 FAM74A3Q4VXF1 159 aa9.79□□□□□ -0.84
NDE1-209ENST00000574109 RNASE8Q8TDE3 154 aaKnown RBP9.79□□□□□ -0.84
NDE1-209ENST00000574109 DERL1Q9BUN8 251 aa9.79□□□□□ -0.84
NDE1-209ENST00000574109 MLST8Q9BVC4 326 aa9.79□□□□□ -0.84
NDE1-209ENST00000574109 SDF2L1Q9HCN8 221 aa9.79□□□□□ -0.84
NDE1-209ENST00000574109 LY96Q9Y6Y9 160 aa9.79□□□□□ -0.84
NDE1-209ENST00000574109 CBY3A6NI87 242 aa9.78□□□□□ -0.84
NDE1-209ENST00000574109 ZNF415Q09FC8 603 aa9.78□□□□□ -0.84
NDE1-209ENST00000574109 ZNF674Q2M3X9 581 aa9.78□□□□□ -0.84
NDE1-209ENST00000574109 IL17DQ8TAD2 202 aa9.78□□□□□ -0.84
NDE1-209ENST00000574109 ZC2HC1AQ96GY0 325 aa9.78□□□□□ -0.84
NDE1-209ENST00000574109 SMIM7Q9BQ49 75 aa9.78□□□□□ -0.84
NDE1-209ENST00000574109 A0A0J9YWU9 116 aa9.77□□□□□ -0.85
NDE1-209ENST00000574109 LYRM9A8MSI8 78 aa9.77□□□□□ -0.85
NDE1-209ENST00000574109 ZNF705GA8MUZ8 300 aaPredicted RBP9.77□□□□□ -0.85
NDE1-209ENST00000574109 SNURFLB1AK76 121 aa9.77□□□□□ -0.85
NDE1-209ENST00000574109 SRP19P09132 144 aaKnown RBP9.77□□□□□ -0.85
NDE1-209ENST00000574109 UQCC3Q6UW78 93 aa9.77□□□□□ -0.85
NDE1-209ENST00000574109 EDA2RQ9HAV5 297 aa9.77□□□□□ -0.85
NDE1-209ENST00000574109 NAGKQ9UJ70 344 aa9.77□□□□□ -0.85
NDE1-209ENST00000574109 HUWE1Q7Z6Z7 4374 aaKnown RBP9.77□□□□□ -0.85
NDE1-209ENST00000574109 TRBV20OR9-2A0A075B6H5 130 aa9.76□□□□□ -0.85
NDE1-209ENST00000574109 HTN1P15515 57 aa9.76□□□□□ -0.85
NDE1-209ENST00000574109 CEBPGP53567 150 aa9.76□□□□□ -0.85
NDE1-209ENST00000574109 TCL1AP56279 114 aa9.76□□□□□ -0.85
NDE1-209ENST00000574109 TIMM8BQ9Y5J9 83 aaPredicted RBP9.76□□□□□ -0.85
NDE1-209ENST00000574109 ZNF727A8MUV8 499 aa9.75□□□□□ -0.85
NDE1-209ENST00000574109 SH2D1AO60880 128 aa9.75□□□□□ -0.85
NDE1-209ENST00000574109 CXCL1P09341 107 aa9.75□□□□□ -0.85
NDE1-209ENST00000574109 SPART-AS1P0CW21 52 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms