RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 WDR73Q6P4I2 378 aa8.32□□□□□ -1.08
CCDC40-208ENST00000572270 FAM159AQ6UWV7 190 aa8.32□□□□□ -1.08
CCDC40-208ENST00000572270 PRRT1Q99946 306 aa8.32□□□□□ -1.08
CCDC40-208ENST00000572270 MGAT4CQ9UBM8 478 aa8.32□□□□□ -1.08
CCDC40-208ENST00000572270 IGKV2-40A0A087WW87 121 aaPredicted RBP8.31□□□□□ -1.08
CCDC40-208ENST00000572270 ANKRD65E5RJM6 399 aa8.31□□□□□ -1.08
CCDC40-208ENST00000572270 PANO1I0J062 215 aa8.31□□□□□ -1.08
CCDC40-208ENST00000572270 IGKV2D-40P01614 121 aaPredicted RBP8.31□□□□□ -1.08
CCDC40-208ENST00000572270 KRTAP10-8P60410 259 aa8.31□□□□□ -1.08
CCDC40-208ENST00000572270 LSM3P62310 102 aaKnown RBP8.31□□□□□ -1.08
CCDC40-208ENST00000572270 NEDD8Q15843 81 aa8.31□□□□□ -1.08
CCDC40-208ENST00000572270 UBE2WQ96B02 151 aa8.31□□□□□ -1.08
CCDC40-208ENST00000572270 DNAJC30Q96LL9 226 aa8.31□□□□□ -1.08
CCDC40-208ENST00000572270 SCGB3A2Q96PL1 93 aa8.31□□□□□ -1.08
CCDC40-208ENST00000572270 VCX3BQ9H321 246 aa8.31□□□□□ -1.08
CCDC40-208ENST00000572270 ZNF492Q9P255 531 aa8.31□□□□□ -1.08
CCDC40-208ENST00000572270 C5orf51A6NDU8 294 aa8.3□□□□□ -1.08
CCDC40-208ENST00000572270 DGAT2L7PQ6IED9 249 aa8.3□□□□□ -1.08
CCDC40-208ENST00000572270 REG3GQ6UW15 175 aa8.3□□□□□ -1.08
CCDC40-208ENST00000572270 IZUMO2Q6UXV1 221 aa8.3□□□□□ -1.08
CCDC40-208ENST00000572270 C9orf163Q8N9P6 203 aa8.3□□□□□ -1.08
CCDC40-208ENST00000572270 C7orf33Q8WU49 177 aa8.3□□□□□ -1.08
CCDC40-208ENST00000572270 RAB2BQ8WUD1 216 aa8.3□□□□□ -1.08
CCDC40-208ENST00000572270 C15orf40Q8WUR7 153 aa8.3□□□□□ -1.08
CCDC40-208ENST00000572270 DPH3Q96FX2 82 aa8.3□□□□□ -1.08
CCDC40-208ENST00000572270 AAMDCQ9H7C9 122 aa8.3□□□□□ -1.08
CCDC40-208ENST00000572270 KLK12Q9UKR0 248 aa8.3□□□□□ -1.08
CCDC40-208ENST00000572270 TIMM9Q9Y5J7 89 aa8.3□□□□□ -1.08
CCDC40-208ENST00000572270 TRBV19A0A075B6N1 114 aa8.29□□□□□ -1.08
CCDC40-208ENST00000572270 FNDC10F2Z333 226 aa8.29□□□□□ -1.08
CCDC40-208ENST00000572270 AKAIN1P0CW23 69 aa8.29□□□□□ -1.08
CCDC40-208ENST00000572270 SSBP1Q04837 148 aaKnown RBP8.29□□□□□ -1.08
CCDC40-208ENST00000572270 C1orf43Q9BWL3 253 aa8.29□□□□□ -1.08
CCDC40-208ENST00000572270 PSENENQ9NZ42 101 aa8.29□□□□□ -1.08
CCDC40-208ENST00000572270 CCDC59Q9P031 241 aaKnown RBP8.29□□□□□ -1.08
CCDC40-208ENST00000572270 EXTL2Q9UBQ6 330 aa8.29□□□□□ -1.08
CCDC40-208ENST00000572270 NAGKQ9UJ70 344 aa8.29□□□□□ -1.08
CCDC40-208ENST00000572270 KIF25-AS1Q9Y6Z4 181 aa8.29□□□□□ -1.08
CCDC40-208ENST00000572270 A0A087WWC5 75 aa8.28□□□□□ -1.08
CCDC40-208ENST00000572270 TRBV7-9A0A0J9YWB2 115 aa8.28□□□□□ -1.08
CCDC40-208ENST00000572270 PHOX2AO14813 284 aa8.28□□□□□ -1.08
CCDC40-208ENST00000572270 CIDEAO60543 219 aa8.28□□□□□ -1.08
CCDC40-208ENST00000572270 ZNF138P52744 262 aa8.28□□□□□ -1.08
CCDC40-208ENST00000572270 Q0VG73 95 aa8.28□□□□□ -1.08
CCDC40-208ENST00000572270 ELOBQ15370 118 aa8.28□□□□□ -1.08
CCDC40-208ENST00000572270 LCE2AQ5TA79 106 aaPredicted RBP8.28□□□□□ -1.08
CCDC40-208ENST00000572270 MZT2AQ6P582 158 aa8.28□□□□□ -1.08
CCDC40-208ENST00000572270 CLVS1Q8IUQ0 354 aaPredicted RBP8.28□□□□□ -1.08
CCDC40-208ENST00000572270 EXOC3-AS1Q8N2X6 119 aa8.28□□□□□ -1.08
CCDC40-208ENST00000572270 OR10G9Q8NGN4 311 aa8.28□□□□□ -1.08
CCDC40-208ENST00000572270 Q8TAT8 98 aa8.28□□□□□ -1.08
CCDC40-208ENST00000572270 ATP5SQ99766 215 aa8.28□□□□□ -1.08
CCDC40-208ENST00000572270 SLC39A9Q9NUM3 307 aa8.28□□□□□ -1.08
CCDC40-208ENST00000572270 IGHV3-73A0A0B4J1V6 119 aa8.27□□□□□ -1.09
CCDC40-208ENST00000572270 USP17L23D6RBM5 183 aa8.27□□□□□ -1.09
CCDC40-208ENST00000572270 RPL19P84098 196 aaKnown RBP8.27□□□□□ -1.09
CCDC40-208ENST00000572270 PDE6HQ13956 83 aa8.27□□□□□ -1.09
CCDC40-208ENST00000572270 ZNF266Q14584 549 aa8.27□□□□□ -1.09
CCDC40-208ENST00000572270 KCNIP4Q6PIL6 250 aa8.27□□□□□ -1.09
CCDC40-208ENST00000572270 ATRAIDQ6UW56 229 aa8.27□□□□□ -1.09
CCDC40-208ENST00000572270 DPPA3Q6W0C5 159 aa8.27□□□□□ -1.09
CCDC40-208ENST00000572270 Q6ZRG5 221 aa8.27□□□□□ -1.09
CCDC40-208ENST00000572270 NIT1Q86X76 327 aa8.27□□□□□ -1.09
CCDC40-208ENST00000572270 RNF185Q96GF1 192 aa8.27□□□□□ -1.09
CCDC40-208ENST00000572270 SCP2D1Q9UJQ7 156 aa8.27□□□□□ -1.09
CCDC40-208ENST00000572270 RAB26Q9ULW5 256 aa8.27□□□□□ -1.09
CCDC40-208ENST00000572270 RABL2BQ9UNT1 228 aa8.27□□□□□ -1.09
CCDC40-208ENST00000572270 MGST1P10620 155 aaKnown RBP8.26□□□□□ -1.09
CCDC40-208ENST00000572270 Q6AWC8 147 aa8.26□□□□□ -1.09
CCDC40-208ENST00000572270 SDIM1Q6ZPB5 146 aa8.26□□□□□ -1.09
CCDC40-208ENST00000572270 C12orf45Q8N5I9 185 aaPredicted RBP8.26□□□□□ -1.09
CCDC40-208ENST00000572270 OR1L4Q8NGR5 311 aa8.26□□□□□ -1.09
CCDC40-208ENST00000572270 PFDN5Q99471 154 aa8.26□□□□□ -1.09
CCDC40-208ENST00000572270 SOSTQ9BQB4 213 aa8.26□□□□□ -1.09
CCDC40-208ENST00000572270 A0A087WX48 190 aa8.25□□□□□ -1.09
CCDC40-208ENST00000572270 NDUFB4O95168 129 aa8.25□□□□□ -1.09
CCDC40-208ENST00000572270 HLA-DQA1P01909 254 aa8.25□□□□□ -1.09
CCDC40-208ENST00000572270 PRSS1P07477 247 aa8.25□□□□□ -1.09
CCDC40-208ENST00000572270 METTL15P1P0C7V9 234 aa8.25□□□□□ -1.09
CCDC40-208ENST00000572270 CIRBPQ14011 172 aaKnown RBP8.25□□□□□ -1.09
CCDC40-208ENST00000572270 CFAP126Q5VTH2 177 aa8.25□□□□□ -1.09
CCDC40-208ENST00000572270 CYB561D1Q8N8Q1 229 aa8.25□□□□□ -1.09
CCDC40-208ENST00000572270 A0A087WYN8 130 aa8.24□□□□□ -1.09
CCDC40-208ENST00000572270 PGPA6NDG6 321 aa8.24□□□□□ -1.09
CCDC40-208ENST00000572270 GAGE12JA6NER3 117 aa8.24□□□□□ -1.09
CCDC40-208ENST00000572270 INPP1P49441 399 aa8.24□□□□□ -1.09
CCDC40-208ENST00000572270 MRPS10P82664 201 aaKnown RBP8.24□□□□□ -1.09
CCDC40-208ENST00000572270 GAGE1Q13065 139 aa8.24□□□□□ -1.09
CCDC40-208ENST00000572270 GAGE4Q13068 117 aa8.24□□□□□ -1.09
CCDC40-208ENST00000572270 GAGE5Q13069 117 aa8.24□□□□□ -1.09
CCDC40-208ENST00000572270 GAGE13Q4V321 117 aa8.24□□□□□ -1.09
CCDC40-208ENST00000572270 MGST2Q99735 147 aa8.24□□□□□ -1.09
CCDC40-208ENST00000572270 GPN1Q9HCN4 374 aaPredicted RBP8.24□□□□□ -1.09
CCDC40-208ENST00000572270 GNRH2O43555 120 aa8.23□□□□□ -1.09
CCDC40-208ENST00000572270 SSSCA1O60232 199 aa8.23□□□□□ -1.09
CCDC40-208ENST00000572270 CRPP02741 224 aa8.23□□□□□ -1.09
CCDC40-208ENST00000572270 HOXB5P09067 269 aa8.23□□□□□ -1.09
CCDC40-208ENST00000572270 VAMP1P23763 118 aa8.23□□□□□ -1.09
CCDC40-208ENST00000572270 PRR3P79522 188 aaKnown RBP8.23□□□□□ -1.09
CCDC40-208ENST00000572270 ZNF876PQ49A33 203 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms