RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 FANCD2OSQ96PS1 177 aa12.99□□□□□ -0.33
LITAF-209ENST00000571688 ZGRF1Q86YA3 2104 aa12.99□□□□□ -0.33
LITAF-209ENST00000571688 IGLV11-55A0A075B6I3 123 aa12.98□□□□□ -0.33
LITAF-209ENST00000571688 IGKV3D-20A0A0C4DH25 116 aa12.98□□□□□ -0.33
LITAF-209ENST00000571688 LINC01549A6NIU2 74 aa12.98□□□□□ -0.33
LITAF-209ENST00000571688 UBE2D1P51668 147 aa12.98□□□□□ -0.33
LITAF-209ENST00000571688 ERCC8Q13216 396 aa12.98□□□□□ -0.33
LITAF-209ENST00000571688 CARD19Q96LW7 228 aa12.98□□□□□ -0.33
LITAF-209ENST00000571688 ZNF318Q5VUA4 2279 aa12.98□□□□□ -0.33
LITAF-209ENST00000571688 TRAV26-2A0A0B4J265 109 aa12.98□□□□□ -0.33
LITAF-209ENST00000571688 UBE2D3P61077 147 aa12.98□□□□□ -0.33
LITAF-209ENST00000571688 UBE2D2P62837 147 aa12.98□□□□□ -0.33
LITAF-209ENST00000571688 A6NJY4 79 aa12.97□□□□□ -0.33
LITAF-209ENST00000571688 C5orf64Q2M2E5 130 aa12.97□□□□□ -0.33
LITAF-209ENST00000571688 TMEM78Q5T7P6 136 aa12.97□□□□□ -0.33
LITAF-209ENST00000571688 PPDPFLQ8WWR9 84 aa12.97□□□□□ -0.33
LITAF-209ENST00000571688 LY6LH3BQJ8 138 aa12.97□□□□□ -0.33
LITAF-209ENST00000571688 RNF183Q96D59 192 aa12.97□□□□□ -0.33
LITAF-209ENST00000571688 C11orf21Q9P2W6 132 aa12.97□□□□□ -0.33
LITAF-209ENST00000571688 COX7A1P24310 79 aa12.96□□□□□ -0.33
LITAF-209ENST00000571688 PSMB2P49721 201 aa12.96□□□□□ -0.33
LITAF-209ENST00000571688 PRAC2D3DTV9 90 aa12.96□□□□□ -0.33
LITAF-209ENST00000571688 TEN1Q86WV5 123 aa12.96□□□□□ -0.33
LITAF-209ENST00000571688 PTH2Q96A98 100 aa12.96□□□□□ -0.33
LITAF-209ENST00000571688 RAXQ9Y2V3 346 aa12.96□□□□□ -0.33
LITAF-209ENST00000571688 IGHV7-4-1A0A0J9YVY3 117 aa12.95□□□□□ -0.34
LITAF-209ENST00000571688 CDX4O14627 284 aaPredicted RBP12.95□□□□□ -0.34
LITAF-209ENST00000571688 TIMM23O14925 209 aa12.95□□□□□ -0.34
LITAF-209ENST00000571688 ZFP2Q6ZN57 461 aa12.95□□□□□ -0.34
LITAF-209ENST00000571688 NEXN-AS1Q8NBZ9 246 aa12.95□□□□□ -0.34
LITAF-209ENST00000571688 OR11H6Q8NGC7 330 aa12.95□□□□□ -0.34
LITAF-209ENST00000571688 ZDBF2Q9HCK1 2354 aa12.95□□□□□ -0.34
LITAF-209ENST00000571688 NBR2O15453 112 aa12.95□□□□□ -0.34
LITAF-209ENST00000571688 GATA3P23771 443 aa12.95□□□□□ -0.34
LITAF-209ENST00000571688 VCX2Q9H322 139 aa12.95□□□□□ -0.34
LITAF-209ENST00000571688 C21orf62Q9NYP8 219 aa12.95□□□□□ -0.34
LITAF-209ENST00000571688 RALYQ9UKM9 306 aaKnown RBP12.95□□□□□ -0.34
LITAF-209ENST00000571688 SMIM2Q9BVW6 85 aa12.94□□□□□ -0.34
LITAF-209ENST00000571688 MUC3AQ02505 3323 aa12.94□□□□□ -0.34
LITAF-209ENST00000571688 LOC107984156A0A0G2JMH3 177 aa12.94□□□□□ -0.34
LITAF-209ENST00000571688 RBAKDNA6NC62 111 aa12.94□□□□□ -0.34
LITAF-209ENST00000571688 BSPH1Q075Z2 132 aa12.94□□□□□ -0.34
LITAF-209ENST00000571688 ARL17AQ8IVW1 177 aa12.94□□□□□ -0.34
LITAF-209ENST00000571688 PRADC1Q9BSG0 188 aa12.94□□□□□ -0.34
LITAF-209ENST00000571688 COLQQ9Y215 455 aaPredicted RBP12.94□□□□□ -0.34
LITAF-209ENST00000571688 UFC1Q9Y3C8 167 aa12.94□□□□□ -0.34
LITAF-209ENST00000571688 SBSPONQ8IVN8 264 aa12.93□□□□□ -0.34
LITAF-209ENST00000571688 RNASE6Q93091 150 aaKnown RBP12.93□□□□□ -0.34
LITAF-209ENST00000571688 TOMM6Q96B49 74 aa12.93□□□□□ -0.34
LITAF-209ENST00000571688 DMXL2Q8TDJ6 3036 aa12.93□□□□□ -0.34
LITAF-209ENST00000571688 TNRC18O15417 2968 aaPredicted RBP12.93□□□□□ -0.34
LITAF-209ENST00000571688 ROS1P08922 2347 aa12.93□□□□□ -0.34
LITAF-209ENST00000571688 IGHV4-4A0A075B6R2 117 aa12.93□□□□□ -0.34
LITAF-209ENST00000571688 CD7P09564 240 aa12.93□□□□□ -0.34
LITAF-209ENST00000571688 LYRM7Q5U5X0 104 aa12.93□□□□□ -0.34
LITAF-209ENST00000571688 SCGB3A1Q96QR1 104 aa12.93□□□□□ -0.34
LITAF-209ENST00000571688 LINC01548A6NM66 108 aa12.92□□□□□ -0.34
LITAF-209ENST00000571688 ZNF815PA8K554 130 aa12.92□□□□□ -0.34
LITAF-209ENST00000571688 SLC25A16P16260 332 aa12.92□□□□□ -0.34
LITAF-209ENST00000571688 NPBQ8NG41 125 aa12.92□□□□□ -0.34
LITAF-209ENST00000571688 IGFBPL1Q8WX77 278 aa12.92□□□□□ -0.34
LITAF-209ENST00000571688 PLEKHB2Q96CS7 222 aa12.92□□□□□ -0.34
LITAF-209ENST00000571688 IGHV3-23P01764 117 aa12.92□□□□□ -0.34
LITAF-209ENST00000571688 COX6B1P14854 86 aa12.92□□□□□ -0.34
LITAF-209ENST00000571688 SFTA2Q6UW10 78 aa12.92□□□□□ -0.34
LITAF-209ENST00000571688 GPR179Q6PRD1 2367 aa12.92□□□□□ -0.34
LITAF-209ENST00000571688 ORMDL2Q53FV1 153 aa12.92□□□□□ -0.34
LITAF-209ENST00000571688 PRSS29PA6NIE9 313 aa12.91□□□□□ -0.34
LITAF-209ENST00000571688 CTSGP08311 255 aa12.91□□□□□ -0.34
LITAF-209ENST00000571688 ZNF688P0C7X2 276 aa12.91□□□□□ -0.34
LITAF-209ENST00000571688 KLK15Q9H2R5 256 aa12.91□□□□□ -0.34
LITAF-209ENST00000571688 TCL1BO95988 128 aa12.9□□□□□ -0.34
LITAF-209ENST00000571688 SRSF9Q13242 221 aaKnown RBP eCLIP12.9□□□□□ -0.34
LITAF-209ENST00000571688 SCGB1D4Q6XE38 83 aa12.9□□□□□ -0.34
LITAF-209ENST00000571688 RNF182Q8N6D2 247 aa12.9□□□□□ -0.34
LITAF-209ENST00000571688 BAALCQ8WXS3 180 aa12.9□□□□□ -0.34
LITAF-209ENST00000571688 SLC50A1Q9BRV3 221 aa12.9□□□□□ -0.34
LITAF-209ENST00000571688 RASL10AQ92737 203 aa12.9□□□□□ -0.35
LITAF-209ENST00000571688 ANAPC13Q9BS18 74 aa12.9□□□□□ -0.35
LITAF-209ENST00000571688 SPANXN1Q5VSR9 72 aa12.89□□□□□ -0.35
LITAF-209ENST00000571688 NDUFA11Q86Y39 141 aa12.89□□□□□ -0.35
LITAF-209ENST00000571688 VKORC1Q9BQB6 163 aa12.89□□□□□ -0.35
LITAF-209ENST00000571688 AGPAT4-IT1Q9H0P7 198 aa12.89□□□□□ -0.35
LITAF-209ENST00000571688 DYNLRB1Q9NP97 96 aa12.89□□□□□ -0.35
LITAF-209ENST00000571688 PKDREJQ9NTG1 2253 aa12.89□□□□□ -0.35
LITAF-209ENST00000571688 TRBV20-1A0A075B6N2 111 aa12.89□□□□□ -0.35
LITAF-209ENST00000571688 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.89□□□□□ -0.35
LITAF-209ENST00000571688 A8MWV9 139 aa12.88□□□□□ -0.35
LITAF-209ENST00000571688 SCGB2A1O75556 95 aa12.88□□□□□ -0.35
LITAF-209ENST00000571688 NDPQ00604 133 aa12.88□□□□□ -0.35
LITAF-209ENST00000571688 DEFB109BQ30KR1 87 aa12.88□□□□□ -0.35
LITAF-209ENST00000571688 PLA2G2CQ5R387 149 aa12.88□□□□□ -0.35
LITAF-209ENST00000571688 ZFAND6Q6FIF0 208 aa12.88□□□□□ -0.35
LITAF-209ENST00000571688 ONECUT1Q9UBC0 465 aa12.88□□□□□ -0.35
LITAF-209ENST00000571688 SS18L2Q9UHA2 77 aa12.88□□□□□ -0.35
LITAF-209ENST00000571688 IGHV3OR16-8A0A075B7F1 116 aa12.87□□□□□ -0.35
LITAF-209ENST00000571688 GAGE5Q13069 117 aa12.87□□□□□ -0.35
LITAF-209ENST00000571688 GAGE6Q13070 117 aa12.87□□□□□ -0.35
LITAF-209ENST00000571688 BOD1L1Q8NFC6 3051 aa12.87□□□□□ -0.35
LITAF-209ENST00000571688 SUMO2P61956 95 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms