RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	MRPS36	P82909	103 aa	Known RBP	0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	CDK6	Q00534	326 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	HSD52	Q0P140	79 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	ZNF345	Q14585	488 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	ZNF846	Q147U1	533 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	C9orf153	Q5TBE3	101 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	CLECL1	Q8IZS7	167 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	OR5AS1	Q8N127	324 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	C4orf33	Q8N1A6	199 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243		Q8N2B8	174 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	C5orf17	Q8NAS9	161 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	OR4X2	Q8NGF9	303 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	OR2T35	Q8NGX2	323 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	OR5AK2	Q8NH90	309 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	C10orf105	Q8TEF2	133 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	TSKU	Q8WUA8	353 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	SFT2D1	Q8WV19	159 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	RAB37	Q96AX2	223 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	HYLS1	Q96M11	299 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	MCEE	Q96PE7	176 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	DSCR8	Q96T75	97 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	SNRNP25	Q9BV90	132 aa	Known RBP	0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	CXCL16	Q9H2A7	254 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	TAS2R4	Q9NYW5	299 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	CCDC167	Q9P0B6	97 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	METTL1	Q9UBP6	276 aa	Known RBP	0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	SBF1	O95248	1867 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	PLXNA3	P51805	1871 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	CPAMD8	Q8IZJ3	1885 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	RP1	P56715	2156 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	TRPM1	Q7Z4N2	1603 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	MYH6	P13533	1939 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	CUL7	Q14999	1698 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	MICAL3	Q7RTP6	2002 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	PRDM2	Q13029	1718 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	VPS8	Q8N3P4	1428 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	NUMA1	Q14980	2115 aa		0.8	□□□□□ -2.28
UBR1-209	ENST00000569243	RAPGEF2	Q9Y4G8	1499 aa		0.8	□□□□□ -2.28
UBR1-209	ENST00000569243	SLX4	Q8IY92	1834 aa		0.8	□□□□□ -2.28
UBR1-209	ENST00000569243	MGAM	O43451	1857 aa		0.8	□□□□□ -2.28
UBR1-209	ENST00000569243	MYH13	Q9UKX3	1938 aa		0.8	□□□□□ -2.28
UBR1-209	ENST00000569243	SCRIB	Q14160	1630 aa		0.8	□□□□□ -2.28
UBR1-209	ENST00000569243	TRAV12-2	A0A075B6T6	113 aa		0.8	□□□□□ -2.28
UBR1-209	ENST00000569243	IGHV1-24	A0A0C4DH33	117 aa		0.8	□□□□□ -2.28
UBR1-209	ENST00000569243	MUC21	A0A0G2JKD1	596 aa		0.8	□□□□□ -2.28
UBR1-209	ENST00000569243	ZNF705F	A8MVS1	300 aa	Predicted RBP	0.8	□□□□□ -2.28
UBR1-209	ENST00000569243	ODF3B	A8MYP8	253 aa		0.8	□□□□□ -2.28
UBR1-209	ENST00000569243	IBA57-AS1	B1ANH7	110 aa		0.8	□□□□□ -2.28
UBR1-209	ENST00000569243	ZNF736	B4DX44	427 aa	Predicted RBP	0.8	□□□□□ -2.28
UBR1-209	ENST00000569243	MCRIP1	C9JLW8	97 aa		0.8	□□□□□ -2.28
UBR1-209	ENST00000569243	LYRM1	O43325	122 aa		0.8	□□□□□ -2.28
UBR1-209	ENST00000569243	RBP4	P02753	201 aa		0.8	□□□□□ -2.28
UBR1-209	ENST00000569243	SPINK8	P0C7L1	97 aa		0.8	□□□□□ -2.28
UBR1-209	ENST00000569243	SAA1	P0DJI8	122 aa	Predicted RBP	0.8	□□□□□ -2.28
UBR1-209	ENST00000569243	CCL4	P13236	92 aa		0.8	□□□□□ -2.28
UBR1-209	ENST00000569243	ERH	P84090	104 aa	Known RBP	0.8	□□□□□ -2.28
UBR1-209	ENST00000569243	ZNF90	Q03938	601 aa		0.8	□□□□□ -2.28
UBR1-209	ENST00000569243	PABPC1L2A	Q5JQF8	200 aa		0.8	□□□□□ -2.28
UBR1-209	ENST00000569243	ZCCHC23	Q6ZST2	131 aa		0.8	□□□□□ -2.28
UBR1-209	ENST00000569243	FP248	Q71RG6	208 aa	Predicted RBP	0.8	□□□□□ -2.28
UBR1-209	ENST00000569243	ACBD7	Q8N6N7	88 aa		0.8	□□□□□ -2.28
UBR1-209	ENST00000569243	C9orf163	Q8N9P6	203 aa		0.8	□□□□□ -2.28
UBR1-209	ENST00000569243	OR8B3	Q8NGG8	313 aa		0.8	□□□□□ -2.28
UBR1-209	ENST00000569243		Q8TAT8	98 aa		0.8	□□□□□ -2.28
UBR1-209	ENST00000569243	AGPAT4-IT1	Q9H0P7	198 aa		0.8	□□□□□ -2.28
UBR1-209	ENST00000569243	RERGL	Q9H628	205 aa		0.8	□□□□□ -2.28
UBR1-209	ENST00000569243	NOP16	Q9Y3C1	178 aa	Known RBP	0.8	□□□□□ -2.28
UBR1-209	ENST00000569243	MPC1	Q9Y5U8	109 aa		0.8	□□□□□ -2.28
UBR1-209	ENST00000569243	LY96	Q9Y6Y9	160 aa		0.8	□□□□□ -2.28
UBR1-209	ENST00000569243	HEATR5B	Q9P2D3	2071 aa		0.8	□□□□□ -2.28
UBR1-209	ENST00000569243	MUC4	Q99102	2169 aa		0.8	□□□□□ -2.28
UBR1-209	ENST00000569243	ZNF609	O15014	1411 aa		0.8	□□□□□ -2.28
UBR1-209	ENST00000569243	KDM6A	O15550	1401 aa	Predicted RBP	0.8	□□□□□ -2.28
UBR1-209	ENST00000569243	NAIP	Q13075	1403 aa		0.8	□□□□□ -2.28
UBR1-209	ENST00000569243	KIAA1107	Q9UPP5	1409 aa		0.8	□□□□□ -2.28
UBR1-209	ENST00000569243	A2ML1	A8K2U0	1454 aa		0.8	□□□□□ -2.28
UBR1-209	ENST00000569243	BCL9L	Q86UU0	1499 aa		0.8	□□□□□ -2.28
UBR1-209	ENST00000569243	HELZ	P42694	1942 aa	Known RBP	0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	ZFYVE16	Q7Z3T8	1539 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	NISCH	Q9Y2I1	1504 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	PTPRB	P23467	1997 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	MYH9	P35579	1960 aa	Known RBP	0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	KIAA1549	Q9HCM3	1950 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	QRICH2	Q9H0J4	1663 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	IGHV3-64	A0A075B6Q5	118 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	TRAV17	A0A0B4J275	112 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243		A0A0G2JQZ4	141 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	PNMA8C	A0A1B0GUJ8	204 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243		A0A1W2PRS3	328 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	C17orf112	F2Z3M2	114 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243		G3V3Q6	166 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243		M0R2P5	195 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	IL5	P05113	134 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	IFITM1	P13164	125 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	BRS3	P32247	399 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	ETV6	P41212	452 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	RPL26	P61254	145 aa	Known RBP	0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	BTG2	P78543	158 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	RBM3	P98179	157 aa	Known RBP	0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	INSL4	Q14641	139 aa		0.79	□□□□□ -2.28

Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms