RNA–Protein interactions for RNA: ENST00000568329.5

CSK-211, Transcript of C-terminal Src kinase, human

TSL 5

Gene CSK, Length 1,552 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSK-211	ENST00000568329	OR11H12	B2RN74	326 aa		11.46	□□□□□ -0.57
CSK-211	ENST00000568329	PFN1	P07737	140 aa	Known RBP	11.46	□□□□□ -0.57
CSK-211	ENST00000568329	ZNF705D	P0CH99	300 aa	Predicted RBP	11.46	□□□□□ -0.57
CSK-211	ENST00000568329	ZNF705B	P0CI00	300 aa	Predicted RBP	11.46	□□□□□ -0.57
CSK-211	ENST00000568329	HLA-DRB4	P13762	266 aa		11.46	□□□□□ -0.57
CSK-211	ENST00000568329	TSPO	P30536	169 aa		11.46	□□□□□ -0.57
CSK-211	ENST00000568329	HLA-DRB4	X5D2U9	266 aa		11.46	□□□□□ -0.57
CSK-211	ENST00000568329	XKRY2	A2RUG3	117 aa		11.45	□□□□□ -0.58
CSK-211	ENST00000568329		A8MWL6	223 aa		11.45	□□□□□ -0.58
CSK-211	ENST00000568329	LEP	P41159	167 aa		11.45	□□□□□ -0.58
CSK-211	ENST00000568329	RPL19	P84098	196 aa	Known RBP	11.45	□□□□□ -0.58
CSK-211	ENST00000568329	BEAN1	Q3B7T3	259 aa		11.45	□□□□□ -0.58
CSK-211	ENST00000568329	LINC00322	Q6ZN03	302 aa	Predicted RBP	11.45	□□□□□ -0.58
CSK-211	ENST00000568329	APRG1	Q8IVJ8	170 aa		11.45	□□□□□ -0.58
CSK-211	ENST00000568329	VWF	P04275	2813 aa		11.45	□□□□□ -0.58
CSK-211	ENST00000568329	ANK2	Q01484	3957 aa		11.45	□□□□□ -0.58
CSK-211	ENST00000568329	FAM231B	A6NCW3	169 aa		11.45	□□□□□ -0.58
CSK-211	ENST00000568329	ELOB	Q15370	118 aa		11.45	□□□□□ -0.58
CSK-211	ENST00000568329	KRTAP21-3	Q3LHN1	58 aa		11.45	□□□□□ -0.58
CSK-211	ENST00000568329	GDF5OS	Q5U4N7	250 aa		11.45	□□□□□ -0.58
CSK-211	ENST00000568329	ZFAND2A	Q8N6M9	145 aa		11.45	□□□□□ -0.58
CSK-211	ENST00000568329	TSKU	Q8WUA8	353 aa		11.45	□□□□□ -0.58
CSK-211	ENST00000568329	CLUHP3	Q96NS8	147 aa		11.45	□□□□□ -0.58
CSK-211	ENST00000568329	GFRA4	Q9GZZ7	299 aa		11.45	□□□□□ -0.58
CSK-211	ENST00000568329	URGCP-MRPS24	S4R325	110 aa		11.45	□□□□□ -0.58
CSK-211	ENST00000568329	TRBV24-1	A0A075B6N3	115 aa		11.44	□□□□□ -0.58
CSK-211	ENST00000568329		A8MTW9	85 aa		11.44	□□□□□ -0.58
CSK-211	ENST00000568329	WIPF1	O43516	503 aa		11.44	□□□□□ -0.58
CSK-211	ENST00000568329	SH2D1A	O60880	128 aa		11.44	□□□□□ -0.58
CSK-211	ENST00000568329	GPX1	P07203	203 aa		11.44	□□□□□ -0.58
CSK-211	ENST00000568329	CRIP1	P50238	77 aa		11.44	□□□□□ -0.58
CSK-211	ENST00000568329	DEFB1	P60022	68 aa		11.44	□□□□□ -0.58
CSK-211	ENST00000568329	RPS20	P60866	119 aa	Known RBP	11.44	□□□□□ -0.58
CSK-211	ENST00000568329	ODF3L2	Q3SX64	289 aa		11.44	□□□□□ -0.58
CSK-211	ENST00000568329	TRAV21	A0A0B4J279	112 aa		11.43	□□□□□ -0.58
CSK-211	ENST00000568329	SMIM27	A0A1W2PRY6	76 aa		11.43	□□□□□ -0.58
CSK-211	ENST00000568329	KLLN	B2CW77	178 aa		11.43	□□□□□ -0.58
CSK-211	ENST00000568329		H3BMM0	161 aa		11.43	□□□□□ -0.58
CSK-211	ENST00000568329	ACTL10	Q5JWF8	245 aa		11.43	□□□□□ -0.58
CSK-211	ENST00000568329	OR2D3	Q8NGH3	330 aa		11.43	□□□□□ -0.58
CSK-211	ENST00000568329	YPEL4	Q96NS1	127 aa		11.43	□□□□□ -0.58
CSK-211	ENST00000568329	TRRAP	Q9Y4A5	3859 aa		11.43	□□□□□ -0.58
CSK-211	ENST00000568329	IGLL1	P15814	213 aa		11.42	□□□□□ -0.58
CSK-211	ENST00000568329	CDKN1B	P46527	198 aa		11.42	□□□□□ -0.58
CSK-211	ENST00000568329	ZNF80	P51504	273 aa	Predicted RBP	11.42	□□□□□ -0.58
CSK-211	ENST00000568329	PRR31	Q5SQ13	230 aa		11.42	□□□□□ -0.58
CSK-211	ENST00000568329		Q6AWC8	147 aa		11.42	□□□□□ -0.58
CSK-211	ENST00000568329	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	11.42	□□□□□ -0.58
CSK-211	ENST00000568329	NAT8B	Q9UHF3	227 aa		11.42	□□□□□ -0.58
CSK-211	ENST00000568329		A0A1W2PPQ1	181 aa		11.41	□□□□□ -0.58
CSK-211	ENST00000568329	TMEM189	A5PLL7	270 aa		11.41	□□□□□ -0.58
CSK-211	ENST00000568329	COLCA2	A8K830	154 aa		11.41	□□□□□ -0.58
CSK-211	ENST00000568329	LINC01559	Q495D7	138 aa		11.41	□□□□□ -0.58
CSK-211	ENST00000568329	PYGO2	Q9BRQ0	406 aa		11.41	□□□□□ -0.58
CSK-211	ENST00000568329	KNCN	A6PVL3	124 aa		11.41	□□□□□ -0.58
CSK-211	ENST00000568329	AMTN	Q6UX39	209 aa		11.41	□□□□□ -0.58
CSK-211	ENST00000568329	GTSCR1	Q86UQ5	136 aa		11.41	□□□□□ -0.58
CSK-211	ENST00000568329	STH	Q8IWL8	128 aa		11.41	□□□□□ -0.58
CSK-211	ENST00000568329	CA1	P00915	261 aa	Predicted RBP	11.4	□□□□□ -0.58
CSK-211	ENST00000568329	ORM1	P02763	201 aa		11.4	□□□□□ -0.58
CSK-211	ENST00000568329	FAM3B	P58499	235 aa	Predicted RBP	11.4	□□□□□ -0.58
CSK-211	ENST00000568329	FAM210B	Q96KR6	192 aa		11.4	□□□□□ -0.58
CSK-211	ENST00000568329	NEU1	Q99519	415 aa		11.4	□□□□□ -0.58
CSK-211	ENST00000568329	C7orf71	A4D174	169 aa		11.39	□□□□□ -0.59
CSK-211	ENST00000568329	IGKV3-20	P01619	116 aa		11.39	□□□□□ -0.59
CSK-211	ENST00000568329	AMBP	P02760	352 aa		11.39	□□□□□ -0.59
CSK-211	ENST00000568329	CXCL1	P09341	107 aa		11.39	□□□□□ -0.59
CSK-211	ENST00000568329	FOXA3	P55318	350 aa	Predicted RBP	11.39	□□□□□ -0.59
CSK-211	ENST00000568329	NUTF2	P61970	127 aa	Known RBP	11.39	□□□□□ -0.59
CSK-211	ENST00000568329	TGIF2-C20orf24	A0A0A6YYL0	155 aa		11.38	□□□□□ -0.59
CSK-211	ENST00000568329	HIGD1C	A8MV81	97 aa		11.38	□□□□□ -0.59
CSK-211	ENST00000568329	TYMS	P04818	313 aa		11.38	□□□□□ -0.59
CSK-211	ENST00000568329	RAB5A	P20339	215 aa		11.38	□□□□□ -0.59
CSK-211	ENST00000568329	RNASE4	P34096	147 aa	Known RBP	11.38	□□□□□ -0.59
CSK-211	ENST00000568329	PRR9	Q5T870	116 aa		11.38	□□□□□ -0.59
CSK-211	ENST00000568329	ZMAT5	Q9UDW3	170 aa	Known RBP	11.38	□□□□□ -0.59
CSK-211	ENST00000568329		J3KRW8	73 aa		11.37	□□□□□ -0.59
CSK-211	ENST00000568329	CD7	P09564	240 aa		11.37	□□□□□ -0.59
CSK-211	ENST00000568329	SPINK13	Q1W4C9	94 aa		11.37	□□□□□ -0.59
CSK-211	ENST00000568329	COX19	Q49B96	90 aa		11.37	□□□□□ -0.59
CSK-211	ENST00000568329	RASL11A	Q6T310	242 aa		11.37	□□□□□ -0.59
CSK-211	ENST00000568329	ATP5L2	Q7Z4Y8	100 aa		11.37	□□□□□ -0.59
CSK-211	ENST00000568329	C19orf73	Q9NVV2	129 aa		11.37	□□□□□ -0.59
CSK-211	ENST00000568329	SORL1	Q92673	2214 aa		11.37	□□□□□ -0.59
CSK-211	ENST00000568329	TCL1A	P56279	114 aa		11.37	□□□□□ -0.59
CSK-211	ENST00000568329	TRPT1	Q86TN4	253 aa	Known RBP	11.37	□□□□□ -0.59
CSK-211	ENST00000568329	NUP35	Q8NFH5	326 aa		11.37	□□□□□ -0.59
CSK-211	ENST00000568329	KCNS1	Q96KK3	526 aa		11.37	□□□□□ -0.59
CSK-211	ENST00000568329	C20orf144	Q9BQM9	153 aa		11.37	□□□□□ -0.59
CSK-211	ENST00000568329		M0R2Z0	102 aa		11.36	□□□□□ -0.59
CSK-211	ENST00000568329	ZNF124	Q15973	351 aa		11.36	□□□□□ -0.59
CSK-211	ENST00000568329	GFI1B	Q5VTD9	330 aa		11.36	□□□□□ -0.59
CSK-211	ENST00000568329	GTSF1	Q8WW33	167 aa		11.36	□□□□□ -0.59
CSK-211	ENST00000568329	BORCS7	Q96B45	105 aa		11.36	□□□□□ -0.59
CSK-211	ENST00000568329	IGKV3D-20	A0A0C4DH25	116 aa		11.35	□□□□□ -0.59
CSK-211	ENST00000568329	OXLD1	Q5BKU9	147 aa		11.35	□□□□□ -0.59
CSK-211	ENST00000568329	FAM159A	Q6UWV7	190 aa		11.35	□□□□□ -0.59
CSK-211	ENST00000568329	SRD5A3	Q9H8P0	318 aa		11.35	□□□□□ -0.59
CSK-211	ENST00000568329	TMSB15B	A0A087X1C1	80 aa		11.34	□□□□□ -0.59
CSK-211	ENST00000568329		F2Z2F3	143 aa		11.34	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms